EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPSIG00000016462 (Gene tree)
Gene ID
102455127
Gene Symbol
SNRPF
Alias
-
Full Name
small nuclear ribonucleoprotein polypeptide F
Gene Type
protein_coding
Species
Pelodiscus_sinensis
Status
putative
Strand
Minus strand
Length
3108 bases
Position
chrJH207385.1:3102846-3105953
Accession
102455127
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPSIP00000018523LSMPF01423.221.9e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPSIT00000018609SNRPF-201258XM_006118289ENSPSIP0000001852386 (aa)XP_006118351K7GE12
Gene Model
Click here to download ENSPSIG00000016462's gene model file
Pathways
Pathway IDPathway NameSource
pss03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016462's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPSIG00000016462SNRPF7751.515ENSPSIG00000016942LSM68351.515
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPSIG00000016462SNRPF99100.000ENSG00000139343SNRPF99100.000Homo_sapiens
ENSPSIG00000016462SNRPF10097.674ENSAPOG00000003377snrpf6797.674Acanthochromis_polyacanthus
ENSPSIG00000016462SNRPF8786.667ENSAMEG00000018718-8687.838Ailuropoda_melanoleuca
ENSPSIG00000016462SNRPF99100.000ENSAMEG00000002166-100100.000Ailuropoda_melanoleuca
ENSPSIG00000016462SNRPF9897.619ENSACIG00000013216snrpf9997.619Amphilophus_citrinellus
ENSPSIG00000016462SNRPF9897.619ENSAOCG00000015108snrpf9997.619Amphiprion_ocellaris
ENSPSIG00000016462SNRPF9897.619ENSAPEG00000022022snrpf9997.619Amphiprion_percula
ENSPSIG00000016462SNRPF10095.349ENSATEG00000022625snrpf9295.349Anabas_testudineus
ENSPSIG00000016462SNRPF10098.837ENSACAG00000014073SNRPF9998.837Anolis_carolinensis
ENSPSIG00000016462SNRPF8391.549ENSANAG00000020297-6591.549Aotus_nancymaae
ENSPSIG00000016462SNRPF99100.000ENSANAG00000032845SNRPF99100.000Aotus_nancymaae
ENSPSIG00000016462SNRPF8768.000ENSANAG00000025860-8368.919Aotus_nancymaae
ENSPSIG00000016462SNRPF9897.619ENSACLG00000016066snrpf9997.619Astatotilapia_calliptera
ENSPSIG00000016462SNRPF8694.595ENSAMXG00000007421snrpf8694.595Astyanax_mexicanus
ENSPSIG00000016462SNRPF99100.000ENSBTAG00000016271SNRPF99100.000Bos_taurus
ENSPSIG00000016462SNRPF9093.506ENSBTAG00000050012-9193.243Bos_taurus
ENSPSIG00000016462SNRPF9072.727WBGene00004918snr-58575.000Caenorhabditis_elegans
ENSPSIG00000016462SNRPF99100.000ENSCJAG00000002705-99100.000Callithrix_jacchus
ENSPSIG00000016462SNRPF99100.000ENSCAFG00000006395-77100.000Canis_familiaris
ENSPSIG00000016462SNRPF8394.366ENSCAFG00000031151-8594.521Canis_familiaris
ENSPSIG00000016462SNRPF8394.366ENSCAFG00020010823-8594.521Canis_lupus_dingo
ENSPSIG00000016462SNRPF9188.462ENSCAFG00020013161-7497.143Canis_lupus_dingo
ENSPSIG00000016462SNRPF9493.827ENSTSYG00000031636-6195.890Carlito_syrichta
ENSPSIG00000016462SNRPF8686.486ENSTSYG00000030635-8686.486Carlito_syrichta
ENSPSIG00000016462SNRPF9994.186ENSTSYG00000036502-9994.186Carlito_syrichta
ENSPSIG00000016462SNRPF99100.000ENSCAPG00000007242SNRPF100100.000Cavia_aperea
ENSPSIG00000016462SNRPF99100.000ENSCPOG00000013898SNRPF99100.000Cavia_porcellus
ENSPSIG00000016462SNRPF9998.824ENSCCAG00000017356-9998.824Cebus_capucinus
ENSPSIG00000016462SNRPF9890.476ENSCCAG00000033627-5791.781Cebus_capucinus
ENSPSIG00000016462SNRPF99100.000ENSCCAG00000037378-99100.000Cebus_capucinus
ENSPSIG00000016462SNRPF99100.000ENSCLAG00000007200SNRPF99100.000Chinchilla_lanigera
ENSPSIG00000016462SNRPF99100.000ENSCSAG00000003602-69100.000Chlorocebus_sabaeus
ENSPSIG00000016462SNRPF73100.000ENSCHOG00000009392SNRPF98100.000Choloepus_hoffmanni
ENSPSIG00000016462SNRPF9989.412ENSCPBG00000026463-8690.541Chrysemys_picta_bellii
ENSPSIG00000016462SNRPF9994.118ENSCPBG00000024287-6794.118Chrysemys_picta_bellii
ENSPSIG00000016462SNRPF8691.892ENSCPBG00000006227-8691.892Chrysemys_picta_bellii
ENSPSIG00000016462SNRPF9988.235ENSCPBG00000001985-8890.541Chrysemys_picta_bellii
ENSPSIG00000016462SNRPF10086.047ENSCSAVG00000007498-8588.000Ciona_savignyi
ENSPSIG00000016462SNRPF99100.000ENSCGRG00001017100-99100.000Cricetulus_griseus_chok1gshd
ENSPSIG00000016462SNRPF8593.151ENSCGRG00001008965-5793.151Cricetulus_griseus_chok1gshd
ENSPSIG00000016462SNRPF9193.590ENSCGRG00000018878-9193.151Cricetulus_griseus_crigri
ENSPSIG00000016462SNRPF99100.000ENSCGRG00000000336-99100.000Cricetulus_griseus_crigri
ENSPSIG00000016462SNRPF8796.000ENSCSEG00000004748snrpf8695.946Cynoglossus_semilaevis
ENSPSIG00000016462SNRPF10097.674ENSCVAG00000000397snrpf6897.674Cyprinodon_variegatus
ENSPSIG00000016462SNRPF9995.402ENSDARG00000105037snrpf9995.402Danio_rerio
ENSPSIG00000016462SNRPF9998.824ENSDNOG00000048989-7698.824Dasypus_novemcinctus
ENSPSIG00000016462SNRPF8683.784ENSDNOG00000049373-6483.784Dasypus_novemcinctus
ENSPSIG00000016462SNRPF99100.000ENSDNOG00000043775-54100.000Dasypus_novemcinctus
ENSPSIG00000016462SNRPF8388.732ENSDORG00000025351-9988.732Dipodomys_ordii
ENSPSIG00000016462SNRPF8198.571ENSDORG00000029740-8598.571Dipodomys_ordii
ENSPSIG00000016462SNRPF9878.571FBgn0000426SmF8382.192Drosophila_melanogaster
ENSPSIG00000016462SNRPF99100.000ENSETEG00000001558-99100.000Echinops_telfairi
ENSPSIG00000016462SNRPF9575.610ENSEBUG00000001793-7286.567Eptatretus_burgeri
ENSPSIG00000016462SNRPF99100.000ENSECAG00000019817SNRPF69100.000Equus_caballus
ENSPSIG00000016462SNRPF99100.000ENSEEUG00000013509SNRPF100100.000Erinaceus_europaeus
ENSPSIG00000016462SNRPF9991.765ENSELUG00000007737RUXF8593.243Esox_lucius
ENSPSIG00000016462SNRPF8694.595ENSELUG00000003121RUXF8694.595Esox_lucius
ENSPSIG00000016462SNRPF99100.000ENSFCAG00000029966-99100.000Felis_catus
ENSPSIG00000016462SNRPF8675.676ENSFCAG00000021942-8575.676Felis_catus
ENSPSIG00000016462SNRPF9778.313ENSFCAG00000031148-7176.623Felis_catus
ENSPSIG00000016462SNRPF100100.000ENSFALG00000010799SNRPF100100.000Ficedula_albicollis
ENSPSIG00000016462SNRPF99100.000ENSFDAG00000002831-99100.000Fukomys_damarensis
ENSPSIG00000016462SNRPF10097.674ENSFHEG00000003240snrpf7597.674Fundulus_heteroclitus
ENSPSIG00000016462SNRPF9997.647ENSGMOG00000007741snrpf10097.647Gadus_morhua
ENSPSIG00000016462SNRPF99100.000ENSGALG00000011409SNRPF99100.000Gallus_gallus
ENSPSIG00000016462SNRPF9897.619ENSGAFG00000016187snrpf9797.619Gambusia_affinis
ENSPSIG00000016462SNRPF9996.471ENSGACG00000020055snrpf10096.471Gasterosteus_aculeatus
ENSPSIG00000016462SNRPF7986.765ENSGAGG00000014132-8286.765Gopherus_agassizii
ENSPSIG00000016462SNRPF7196.721ENSGAGG00000020974-5196.721Gopherus_agassizii
ENSPSIG00000016462SNRPF9291.139ENSGAGG00000022991-8094.118Gopherus_agassizii
ENSPSIG00000016462SNRPF7091.667ENSGAGG00000011163-10091.667Gopherus_agassizii
ENSPSIG00000016462SNRPF8693.243ENSGAGG00000012945-6894.595Gopherus_agassizii
ENSPSIG00000016462SNRPF9175.641ENSGGOG00000039564-8974.324Gorilla_gorilla
ENSPSIG00000016462SNRPF99100.000ENSGGOG00000001127-99100.000Gorilla_gorilla
ENSPSIG00000016462SNRPF9780.723ENSGGOG00000039936-8278.378Gorilla_gorilla
ENSPSIG00000016462SNRPF99100.000ENSHGLG00000009108SNRPF99100.000Heterocephalus_glaber_female
ENSPSIG00000016462SNRPF9998.824ENSHGLG00000021172-9998.824Heterocephalus_glaber_female
ENSPSIG00000016462SNRPF9998.824ENSHGLG00100019596-9998.824Heterocephalus_glaber_male
ENSPSIG00000016462SNRPF99100.000ENSHGLG00100008103-100100.000Heterocephalus_glaber_male
ENSPSIG00000016462SNRPF7385.714ENSHCOG00000018663snrpf5585.714Hippocampus_comes
ENSPSIG00000016462SNRPF9997.647ENSIPUG00000018994snrpf9997.647Ictalurus_punctatus
ENSPSIG00000016462SNRPF99100.000ENSSTOG00000010434-99100.000Ictidomys_tridecemlineatus
ENSPSIG00000016462SNRPF9981.176ENSJJAG00000004558-8882.432Jaculus_jaculus
ENSPSIG00000016462SNRPF7894.030ENSJJAG00000004828-10094.030Jaculus_jaculus
ENSPSIG00000016462SNRPF9984.706ENSJJAG00000010502-8886.486Jaculus_jaculus
ENSPSIG00000016462SNRPF99100.000ENSJJAG00000011272-99100.000Jaculus_jaculus
ENSPSIG00000016462SNRPF9897.619ENSKMAG00000013566snrpf9897.619Kryptolebias_marmoratus
ENSPSIG00000016462SNRPF9996.471ENSLBEG00000008800snrpf9996.471Labrus_bergylta
ENSPSIG00000016462SNRPF99100.000ENSLACG00000002456-73100.000Latimeria_chalumnae
ENSPSIG00000016462SNRPF8694.595ENSLOCG00000015744snrpf8694.595Lepisosteus_oculatus
ENSPSIG00000016462SNRPF100100.000ENSLAFG00000017426SNRPF100100.000Loxodonta_africana
ENSPSIG00000016462SNRPF9896.429ENSMAMG00000016593snrpf9996.429Mastacembelus_armatus
ENSPSIG00000016462SNRPF9897.619ENSMZEG00005014701snrpf9997.619Maylandia_zebra
ENSPSIG00000016462SNRPF98100.000ENSMGAG00000011453-76100.000Meleagris_gallopavo
ENSPSIG00000016462SNRPF86100.000ENSMAUG00000016909-100100.000Mesocricetus_auratus
ENSPSIG00000016462SNRPF8793.333ENSMAUG00000008799-8694.595Mesocricetus_auratus
ENSPSIG00000016462SNRPF9774.699ENSMAUG00000010289-9674.699Mesocricetus_auratus
ENSPSIG00000016462SNRPF86100.000ENSMAUG00000019737-100100.000Mesocricetus_auratus
ENSPSIG00000016462SNRPF8693.243ENSMICG00000030494-5993.243Microcebus_murinus
ENSPSIG00000016462SNRPF99100.000ENSMICG00000012153-99100.000Microcebus_murinus
ENSPSIG00000016462SNRPF99100.000ENSMOCG00000020437Snrpf99100.000Microtus_ochrogaster
ENSPSIG00000016462SNRPF8685.135ENSMOCG00000022166-8185.135Microtus_ochrogaster
ENSPSIG00000016462SNRPF7983.824ENSMOCG00000020220-8783.824Microtus_ochrogaster
ENSPSIG00000016462SNRPF9996.471ENSMMOG00000007127snrpf10096.471Mola_mola
ENSPSIG00000016462SNRPF99100.000ENSMODG00000008091SNRPF75100.000Monodelphis_domestica
ENSPSIG00000016462SNRPF9897.619ENSMALG00000012328snrpf9997.619Monopterus_albus
ENSPSIG00000016462SNRPF99100.000MGP_CAROLIEiJ_G0015735-99100.000Mus_caroli
ENSPSIG00000016462SNRPF99100.000ENSMUSG00000020018Snrpf99100.000Mus_musculus
ENSPSIG00000016462SNRPF99100.000MGP_PahariEiJ_G0031350Snrpf99100.000Mus_pahari
ENSPSIG00000016462SNRPF99100.000MGP_SPRETEiJ_G0016553Snrpf99100.000Mus_spretus
ENSPSIG00000016462SNRPF99100.000ENSMPUG00000007176-76100.000Mustela_putorius_furo
ENSPSIG00000016462SNRPF99100.000ENSMLUG00000029201-80100.000Myotis_lucifugus
ENSPSIG00000016462SNRPF99100.000ENSMLUG00000026149-80100.000Myotis_lucifugus
ENSPSIG00000016462SNRPF99100.000ENSMLUG00000027932-80100.000Myotis_lucifugus
ENSPSIG00000016462SNRPF9981.176ENSMLUG00000026269-7079.730Myotis_lucifugus
ENSPSIG00000016462SNRPF99100.000ENSMLUG00000013577-100100.000Myotis_lucifugus
ENSPSIG00000016462SNRPF7390.476ENSNGAG00000005851-7190.000Nannospalax_galili
ENSPSIG00000016462SNRPF99100.000ENSNGAG00000024292-99100.000Nannospalax_galili
ENSPSIG00000016462SNRPF10097.674ENSNBRG00000011682snrpf8897.674Neolamprologus_brichardi
ENSPSIG00000016462SNRPF8670.270ENSMEUG00000000671SNRPF8770.270Notamacropus_eugenii
ENSPSIG00000016462SNRPF99100.000ENSODEG00000010328-99100.000Octodon_degus
ENSPSIG00000016462SNRPF99100.000ENSOCUG00000010925SNRPF75100.000Oryctolagus_cuniculus
ENSPSIG00000016462SNRPF8694.595ENSORLG00020008216snrpf8794.595Oryzias_latipes_hni
ENSPSIG00000016462SNRPF8694.595ENSORLG00015007418snrpf8794.595Oryzias_latipes_hsok
ENSPSIG00000016462SNRPF9896.429ENSOMEG00000003018snrpf9996.429Oryzias_melastigma
ENSPSIG00000016462SNRPF9997.647ENSOGAG00000030323-9997.647Otolemur_garnettii
ENSPSIG00000016462SNRPF99100.000ENSOARG00000011853-74100.000Ovis_aries
ENSPSIG00000016462SNRPF9175.641ENSPPAG00000037479-8974.324Pan_paniscus
ENSPSIG00000016462SNRPF9780.723ENSPPAG00000037544-8278.378Pan_paniscus
ENSPSIG00000016462SNRPF99100.000ENSPPRG00000005875-99100.000Panthera_pardus
ENSPSIG00000016462SNRPF9777.108ENSPPRG00000007449-7677.027Panthera_pardus
ENSPSIG00000016462SNRPF9779.518ENSPTIG00000005117-8877.027Panthera_tigris_altaica
ENSPSIG00000016462SNRPF99100.000ENSPTIG00000007520SNRPF99100.000Panthera_tigris_altaica
ENSPSIG00000016462SNRPF9780.723ENSPTRG00000043814-8278.378Pan_troglodytes
ENSPSIG00000016462SNRPF9175.641ENSPTRG00000047717-8974.324Pan_troglodytes
ENSPSIG00000016462SNRPF10096.512ENSPKIG00000014784snrpf9596.512Paramormyrops_kingsleyae
ENSPSIG00000016462SNRPF9996.471ENSPMGG00000023548snrpf10096.471Periophthalmus_magnuspinnatus
ENSPSIG00000016462SNRPF99100.000ENSPEMG00000023326Snrpf99100.000Peromyscus_maniculatus_bairdii
ENSPSIG00000016462SNRPF9897.619ENSPLAG00000023932snrpf9997.619Poecilia_latipinna
ENSPSIG00000016462SNRPF9897.619ENSPMEG00000003377snrpf9997.619Poecilia_mexicana
ENSPSIG00000016462SNRPF9897.619ENSPREG00000022635snrpf9797.619Poecilia_reticulata
ENSPSIG00000016462SNRPF99100.000ENSPPYG00000004847-99100.000Pongo_abelii
ENSPSIG00000016462SNRPF99100.000ENSPCOG00000023833-99100.000Propithecus_coquereli
ENSPSIG00000016462SNRPF99100.000ENSPVAG00000009036SNRPF99100.000Pteropus_vampyrus
ENSPSIG00000016462SNRPF9897.619ENSPNYG00000021712snrpf9997.619Pundamilia_nyererei
ENSPSIG00000016462SNRPF9896.429ENSPNAG00000019117snrpf9996.429Pygocentrus_nattereri
ENSPSIG00000016462SNRPF99100.000ENSRNOG00000005556Snrpf99100.000Rattus_norvegicus
ENSPSIG00000016462SNRPF9996.471ENSRBIG00000030414-9996.471Rhinopithecus_bieti
ENSPSIG00000016462SNRPF9996.471ENSRROG00000021975-9996.471Rhinopithecus_roxellana
ENSPSIG00000016462SNRPF8159.155YPR182WSMX38359.155Saccharomyces_cerevisiae
ENSPSIG00000016462SNRPF9080.000ENSSBOG00000027638-9080.000Saimiri_boliviensis_boliviensis
ENSPSIG00000016462SNRPF9998.824ENSSBOG00000012868-9998.824Saimiri_boliviensis_boliviensis
ENSPSIG00000016462SNRPF99100.000ENSSBOG00000036179-99100.000Saimiri_boliviensis_boliviensis
ENSPSIG00000016462SNRPF8685.135ENSSBOG00000032297-8585.135Saimiri_boliviensis_boliviensis
ENSPSIG00000016462SNRPF99100.000ENSSHAG00000012294SNRPF77100.000Sarcophilus_harrisii
ENSPSIG00000016462SNRPF7695.385ENSSFOG00015021523snrpf9795.385Scleropages_formosus
ENSPSIG00000016462SNRPF9996.471ENSSMAG00000005533snrpf9896.471Scophthalmus_maximus
ENSPSIG00000016462SNRPF7496.875ENSSDUG00000016283snrpf7696.875Seriola_dumerili
ENSPSIG00000016462SNRPF9472.840ENSSLDG00000003885-9176.000Seriola_lalandi_dorsalis
ENSPSIG00000016462SNRPF9897.619ENSSLDG00000005119snrpf9897.619Seriola_lalandi_dorsalis
ENSPSIG00000016462SNRPF98100.000ENSSPUG00000014590-99100.000Sphenodon_punctatus
ENSPSIG00000016462SNRPF10096.512ENSSPAG00000003283snrpf9896.512Stegastes_partitus
ENSPSIG00000016462SNRPF99100.000ENSSSCG00000000895SNRPF99100.000Sus_scrofa
ENSPSIG00000016462SNRPF6794.828ENSTRUG00000014956snrpf8494.828Takifugu_rubripes
ENSPSIG00000016462SNRPF9996.471ENSTNIG00000012672snrpf9996.471Tetraodon_nigroviridis
ENSPSIG00000016462SNRPF8670.270ENSTTRG00000006070SNRPF8670.270Tursiops_truncatus
ENSPSIG00000016462SNRPF9987.059ENSUAMG00000001101-8789.189Ursus_americanus
ENSPSIG00000016462SNRPF99100.000ENSUAMG00000008176-99100.000Ursus_americanus
ENSPSIG00000016462SNRPF8689.189ENSUMAG00000006177-8789.189Ursus_maritimus
ENSPSIG00000016462SNRPF99100.000ENSUMAG00000003528-99100.000Ursus_maritimus
ENSPSIG00000016462SNRPF99100.000ENSVPAG00000008712-99100.000Vicugna_pacos
ENSPSIG00000016462SNRPF9092.208ENSVVUG00000023821-9591.892Vulpes_vulpes
ENSPSIG00000016462SNRPF8675.000ENSXETG00000021630snrpf8775.000Xenopus_tropicalis
ENSPSIG00000016462SNRPF9897.619ENSXCOG00000013860snrpf9797.619Xiphophorus_couchianus
ENSPSIG00000016462SNRPF9897.619ENSXMAG00000015448snrpf9997.619Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us