EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000016553 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 21322 bases
Position: chrJH206803.1:2402-23723
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000018642	zf-C2H2	PF00096.26	6e-24	1	4
ENSPSIP00000018642	zf-C2H2	PF00096.26	6e-24	2	4
ENSPSIP00000018642	zf-C2H2	PF00096.26	6e-24	3	4
ENSPSIP00000018642	zf-C2H2	PF00096.26	6e-24	4	4
ENSPSIP00000018642	zf-met	PF12874.7	2.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000018728	-	3361	-	ENSPSIP00000018642	435 (aa)	-	K7GED1

Gene Model

Click here to download ENSPSIG00000016553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000016553	-	52	40.506	ENSPSIG00000006768	OVOL2	70	40.506
ENSPSIG00000016553	-	52	34.659	ENSPSIG00000015216	-	72	34.659
ENSPSIG00000016553	-	68	31.169	ENSPSIG00000004614	-	96	31.169
ENSPSIG00000016553	-	57	33.775	ENSPSIG00000009270	-	65	33.775
ENSPSIG00000016553	-	55	30.233	ENSPSIG00000003607	SNAI1	79	30.233
ENSPSIG00000016553	-	56	30.058	ENSPSIG00000000760	-	91	30.058
ENSPSIG00000016553	-	52	38.824	ENSPSIG00000010405	-	99	38.824
ENSPSIG00000016553	-	52	39.181	ENSPSIG00000000333	-	70	39.181
ENSPSIG00000016553	-	73	34.091	ENSPSIG00000006586	-	99	34.091
ENSPSIG00000016553	-	53	34.615	ENSPSIG00000002569	-	79	35.385
ENSPSIG00000016553	-	73	37.931	ENSPSIG00000005128	-	100	42.697
ENSPSIG00000016553	-	53	33.562	ENSPSIG00000015465	-	71	33.562
ENSPSIG00000016553	-	57	40.741	ENSPSIG00000001026	-	88	40.741
ENSPSIG00000016553	-	60	30.000	ENSPSIG00000016380	-	84	30.000
ENSPSIG00000016553	-	60	98.462	ENSPSIG00000011562	-	66	98.462
ENSPSIG00000016553	-	52	34.503	ENSPSIG00000010248	-	62	34.503
ENSPSIG00000016553	-	52	37.908	ENSPSIG00000012865	-	69	37.908
ENSPSIG00000016553	-	59	37.569	ENSPSIG00000005603	-	73	37.569
ENSPSIG00000016553	-	56	35.928	ENSPSIG00000004647	-	77	35.928
ENSPSIG00000016553	-	59	34.091	ENSPSIG00000010328	-	72	34.091
ENSPSIG00000016553	-	54	35.172	ENSPSIG00000016395	SNAI2	90	32.979
ENSPSIG00000016553	-	62	33.028	ENSPSIG00000008588	-	100	33.028
ENSPSIG00000016553	-	60	35.238	ENSPSIG00000015459	-	72	35.238
ENSPSIG00000016553	-	52	40.476	ENSPSIG00000000672	-	79	40.476
ENSPSIG00000016553	-	52	35.673	ENSPSIG00000005672	-	62	35.673
ENSPSIG00000016553	-	52	36.257	ENSPSIG00000009603	-	96	36.257
ENSPSIG00000016553	-	52	36.612	ENSPSIG00000001739	-	99	36.612
ENSPSIG00000016553	-	54	32.022	ENSPSIG00000004682	ZNF652	62	32.022
ENSPSIG00000016553	-	56	33.708	ENSPSIG00000003152	-	82	33.708
ENSPSIG00000016553	-	54	37.931	ENSPSIG00000009893	-	63	37.931
ENSPSIG00000016553	-	53	35.465	ENSPSIG00000004502	-	53	35.465
ENSPSIG00000016553	-	52	37.059	ENSPSIG00000013021	-	73	37.647
ENSPSIG00000016553	-	74	32.934	ENSPSIG00000012650	-	69	32.934
ENSPSIG00000016553	-	52	36.471	ENSPSIG00000009650	-	67	36.471
ENSPSIG00000016553	-	52	32.487	ENSPSIG00000013505	PRDM5	68	32.487
ENSPSIG00000016553	-	59	38.750	ENSPSIG00000016247	-	58	38.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000016553	-	91	82.809	ENSG00000100105	PATZ1	71	79.275	Homo_sapiens
ENSPSIG00000016553	-	85	59.500	ENSAPOG00000018447	patz1	72	58.047	Acanthochromis_polyacanthus
ENSPSIG00000016553	-	91	82.809	ENSAMEG00000007074	PATZ1	60	83.535	Ailuropoda_melanoleuca
ENSPSIG00000016553	-	93	56.582	ENSACIG00000016779	patz1	71	56.582	Amphilophus_citrinellus
ENSPSIG00000016553	-	85	61.082	ENSAPEG00000013354	patz1	72	58.201	Amphiprion_percula
ENSPSIG00000016553	-	92	57.176	ENSATEG00000011260	patz1	62	57.176	Anabas_testudineus
ENSPSIG00000016553	-	91	89.706	ENSAPLG00000003934	PATZ1	71	89.706	Anas_platyrhynchos
ENSPSIG00000016553	-	91	82.809	ENSANAG00000029603	PATZ1	60	83.051	Aotus_nancymaae
ENSPSIG00000016553	-	86	60.630	ENSAMXG00000002273	patz1	60	53.253	Astyanax_mexicanus
ENSPSIG00000016553	-	91	82.809	ENSBTAG00000005478	PATZ1	60	83.535	Bos_taurus
ENSPSIG00000016553	-	91	82.809	ENSCJAG00000010978	PATZ1	60	83.051	Callithrix_jacchus
ENSPSIG00000016553	-	91	82.809	ENSCAFG00000013087	PATZ1	60	83.535	Canis_familiaris
ENSPSIG00000016553	-	91	82.324	ENSCHIG00000020203	PATZ1	60	83.051	Capra_hircus
ENSPSIG00000016553	-	91	83.293	ENSTSYG00000033183	PATZ1	60	83.535	Carlito_syrichta
ENSPSIG00000016553	-	91	82.809	ENSCCAG00000028772	PATZ1	60	83.051	Cebus_capucinus
ENSPSIG00000016553	-	91	83.051	ENSCATG00000006101	PATZ1	60	83.293	Cercocebus_atys
ENSPSIG00000016553	-	91	90.686	ENSCPBG00000011277	PATZ1	60	90.686	Chrysemys_picta_bellii
ENSPSIG00000016553	-	91	83.051	ENSCANG00000024972	PATZ1	60	83.293	Colobus_angolensis_palliatus
ENSPSIG00000016553	-	91	80.387	ENSCGRG00001004071	Patz1	59	80.630	Cricetulus_griseus_chok1gshd
ENSPSIG00000016553	-	91	82.809	ENSCGRG00000004814	Patz1	64	83.051	Cricetulus_griseus_crigri
ENSPSIG00000016553	-	90	56.351	ENSCSEG00000001385	patz1	65	56.193	Cynoglossus_semilaevis
ENSPSIG00000016553	-	92	56.782	ENSCVAG00000007684	patz1	71	59.043	Cyprinodon_variegatus
ENSPSIG00000016553	-	91	57.843	ENSDARG00000076584	patz1	57	58.516	Danio_rerio
ENSPSIG00000016553	-	91	82.809	ENSDNOG00000003183	PATZ1	66	83.535	Dasypus_novemcinctus
ENSPSIG00000016553	-	91	82.809	ENSDORG00000023834	Patz1	60	83.535	Dipodomys_ordii
ENSPSIG00000016553	-	91	83.293	ENSECAG00000025030	PATZ1	60	83.535	Equus_caballus
ENSPSIG00000016553	-	91	55.856	ENSELUG00000002333	patz1	56	57.841	Esox_lucius
ENSPSIG00000016553	-	91	82.809	ENSFCAG00000030253	PATZ1	60	83.535	Felis_catus
ENSPSIG00000016553	-	91	89.951	ENSFALG00000007450	PATZ1	70	89.951	Ficedula_albicollis
ENSPSIG00000016553	-	91	77.053	ENSFDAG00000005614	PATZ1	62	77.778	Fukomys_damarensis
ENSPSIG00000016553	-	91	56.322	ENSFHEG00000014755	patz1	71	58.047	Fundulus_heteroclitus
ENSPSIG00000016553	-	85	56.923	ENSGMOG00000001062	patz1	56	56.923	Gadus_morhua
ENSPSIG00000016553	-	91	89.706	ENSGALG00000006934	PATZ1	59	89.706	Gallus_gallus
ENSPSIG00000016553	-	92	56.501	ENSGAFG00000010053	patz1	73	56.728	Gambusia_affinis
ENSPSIG00000016553	-	91	90.686	ENSGAGG00000003214	PATZ1	70	90.686	Gopherus_agassizii
ENSPSIG00000016553	-	91	83.051	ENSGGOG00000017171	PATZ1	60	83.293	Gorilla_gorilla
ENSPSIG00000016553	-	85	58.629	ENSHCOG00000017644	patz1	53	58.678	Hippocampus_comes
ENSPSIG00000016553	-	86	59.055	ENSIPUG00000017653	patz1	50	59.055	Ictalurus_punctatus
ENSPSIG00000016553	-	91	82.567	ENSSTOG00000020707	PATZ1	60	83.293	Ictidomys_tridecemlineatus
ENSPSIG00000016553	-	91	82.367	ENSJJAG00000015259	Patz1	60	82.609	Jaculus_jaculus
ENSPSIG00000016553	-	92	56.909	ENSKMAG00000008157	patz1	65	57.077	Kryptolebias_marmoratus
ENSPSIG00000016553	-	91	82.324	ENSLAFG00000002317	PATZ1	61	83.051	Loxodonta_africana
ENSPSIG00000016553	-	91	83.051	ENSMFAG00000040968	PATZ1	60	83.293	Macaca_fascicularis
ENSPSIG00000016553	-	91	83.051	ENSMNEG00000037588	PATZ1	60	83.293	Macaca_nemestrina
ENSPSIG00000016553	-	91	83.051	ENSMLEG00000030938	PATZ1	60	83.293	Mandrillus_leucophaeus
ENSPSIG00000016553	-	85	60.000	ENSMAMG00000023652	patz1	72	58.575	Mastacembelus_armatus
ENSPSIG00000016553	-	91	87.715	ENSMGAG00000008439	PATZ1	73	87.715	Meleagris_gallopavo
ENSPSIG00000016553	-	91	82.809	ENSMAUG00000004129	Patz1	60	83.051	Mesocricetus_auratus
ENSPSIG00000016553	-	91	83.535	ENSMICG00000005430	PATZ1	60	83.777	Microcebus_murinus
ENSPSIG00000016553	-	91	83.051	ENSMOCG00000014488	Patz1	60	83.293	Microtus_ochrogaster
ENSPSIG00000016553	-	85	59.733	ENSMALG00000021172	patz1	71	57.493	Monopterus_albus
ENSPSIG00000016553	-	91	82.809	MGP_CAROLIEiJ_G0016007	Patz1	71	79.275	Mus_caroli
ENSPSIG00000016553	-	91	82.809	ENSMUSG00000020453	Patz1	71	79.275	Mus_musculus
ENSPSIG00000016553	-	91	82.809	MGP_PahariEiJ_G0016884	Patz1	71	79.275	Mus_pahari
ENSPSIG00000016553	-	91	82.809	MGP_SPRETEiJ_G0016846	Patz1	71	79.275	Mus_spretus
ENSPSIG00000016553	-	91	82.809	ENSMLUG00000009942	PATZ1	60	83.535	Myotis_lucifugus
ENSPSIG00000016553	-	91	83.051	ENSNGAG00000010268	Patz1	60	83.293	Nannospalax_galili
ENSPSIG00000016553	-	85	60.982	ENSNBRG00000016032	patz1	56	60.982	Neolamprologus_brichardi
ENSPSIG00000016553	-	76	89.666	ENSMEUG00000016293	PATZ1	71	89.666	Notamacropus_eugenii
ENSPSIG00000016553	-	91	82.567	ENSODEG00000003589	PATZ1	60	82.567	Octodon_degus
ENSPSIG00000016553	-	92	57.045	ENSONIG00000004248	patz1	72	58.268	Oreochromis_niloticus
ENSPSIG00000016553	-	91	84.783	ENSOANG00000014654	PATZ1	60	84.783	Ornithorhynchus_anatinus
ENSPSIG00000016553	-	85	59.750	ENSORLG00020010937	patz1	60	60.163	Oryzias_latipes_hni
ENSPSIG00000016553	-	85	59.649	ENSORLG00015007396	patz1	56	59.649	Oryzias_latipes_hsok
ENSPSIG00000016553	-	90	58.481	ENSOMEG00000006636	patz1	57	59.467	Oryzias_melastigma
ENSPSIG00000016553	-	91	83.293	ENSOGAG00000027905	PATZ1	60	83.535	Otolemur_garnettii
ENSPSIG00000016553	-	91	83.051	ENSPPAG00000033227	PATZ1	60	83.293	Pan_paniscus
ENSPSIG00000016553	-	91	82.809	ENSPPRG00000001573	PATZ1	60	83.535	Panthera_pardus
ENSPSIG00000016553	-	91	82.809	ENSPTIG00000007937	PATZ1	63	83.535	Panthera_tigris_altaica
ENSPSIG00000016553	-	91	83.051	ENSPTRG00000014268	PATZ1	60	83.293	Pan_troglodytes
ENSPSIG00000016553	-	91	83.051	ENSPANG00000006821	PATZ1	60	83.293	Papio_anubis
ENSPSIG00000016553	-	90	61.893	ENSPKIG00000019584	patz1	60	62.136	Paramormyrops_kingsleyae
ENSPSIG00000016553	-	85	60.668	ENSPMGG00000010196	patz1	58	60.668	Periophthalmus_magnuspinnatus
ENSPSIG00000016553	-	91	83.051	ENSPEMG00000005321	Patz1	60	83.051	Peromyscus_maniculatus_bairdii
ENSPSIG00000016553	-	85	58.853	ENSPLAG00000010425	patz1	68	58.250	Poecilia_latipinna
ENSPSIG00000016553	-	92	56.738	ENSPMEG00000000255	patz1	57	56.728	Poecilia_mexicana
ENSPSIG00000016553	-	85	58.750	ENSPREG00000002440	patz1	57	58.145	Poecilia_reticulata
ENSPSIG00000016553	-	91	83.051	ENSPPYG00000011732	PATZ1	60	83.293	Pongo_abelii
ENSPSIG00000016553	-	91	83.535	ENSPCOG00000019729	PATZ1	60	83.777	Propithecus_coquereli
ENSPSIG00000016553	-	91	82.809	ENSPVAG00000001749	PATZ1	60	83.535	Pteropus_vampyrus
ENSPSIG00000016553	-	85	61.954	ENSPNYG00000013542	patz1	71	58.575	Pundamilia_nyererei
ENSPSIG00000016553	-	90	57.710	ENSPNAG00000017222	patz1	71	57.710	Pygocentrus_nattereri
ENSPSIG00000016553	-	91	83.051	ENSRBIG00000044231	PATZ1	60	83.293	Rhinopithecus_bieti
ENSPSIG00000016553	-	91	83.051	ENSRROG00000037155	PATZ1	60	83.293	Rhinopithecus_roxellana
ENSPSIG00000016553	-	91	82.809	ENSSBOG00000003894	PATZ1	60	83.051	Saimiri_boliviensis_boliviensis
ENSPSIG00000016553	-	64	68.980	ENSSMAG00000020844	patz1	76	68.980	Scophthalmus_maximus
ENSPSIG00000016553	-	91	88.808	ENSSPUG00000015298	PATZ1	59	89.294	Sphenodon_punctatus
ENSPSIG00000016553	-	91	82.809	ENSSSCG00000010027	PATZ1	71	83.535	Sus_scrofa
ENSPSIG00000016553	-	96	54.853	ENSTRUG00000015366	patz1	60	57.009	Takifugu_rubripes
ENSPSIG00000016553	-	91	82.809	ENSTTRG00000010279	PATZ1	60	83.535	Tursiops_truncatus
ENSPSIG00000016553	-	99	80.717	ENSUAMG00000015014	PATZ1	67	81.390	Ursus_americanus
ENSPSIG00000016553	-	91	73.618	ENSXETG00000004190	patz1	61	73.618	Xenopus_tropicalis
ENSPSIG00000016553	-	92	56.974	ENSXMAG00000015531	patz1	73	57.256	Xiphophorus_maculatus