EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000016569 (Gene tree)
Gene ID: 102456491
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 7871 bases
Position: chrJH211383.1:32604-40474
Accession: 102456491
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000018634	PRP38	PF03371.15	1.1e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000018720	-	1638	XM_006132607	ENSPSIP00000018634	545 (aa)	XP_006132669	K7GEC3

Gene Model

Click here to download ENSPSIG00000016569's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016569's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000016569	-	100	86.654	ENSBTAG00000047874	PRPF38B	100	85.818	Bos_taurus
ENSPSIG00000016569	-	100	70.909	ENSCAFG00020010992	-	100	77.076	Canis_lupus_dingo
ENSPSIG00000016569	-	100	86.654	ENSCHIG00000024357	-	100	85.818	Capra_hircus
ENSPSIG00000016569	-	79	86.079	ENSCAPG00000009606	-	98	86.811	Cavia_aperea
ENSPSIG00000016569	-	100	85.138	ENSCPOG00000039545	-	100	84.517	Cavia_porcellus
ENSPSIG00000016569	-	100	85.091	ENSCLAG00000005801	-	100	84.477	Chinchilla_lanigera
ENSPSIG00000016569	-	64	79.037	ENSCHOG00000008972	-	93	76.667	Choloepus_hoffmanni
ENSPSIG00000016569	-	100	95.963	ENSCPBG00000028299	-	100	95.963	Chrysemys_picta_bellii
ENSPSIG00000016569	-	54	55.137	ENSCSAVG00000009443	-	71	73.958	Ciona_savignyi
ENSPSIG00000016569	-	82	83.444	ENSETEG00000014690	-	100	83.664	Echinops_telfairi
ENSPSIG00000016569	-	83	87.033	ENSFALG00000002673	-	89	88.352	Ficedula_albicollis
ENSPSIG00000016569	-	100	91.621	ENSGALG00000001972	-	100	91.621	Gallus_gallus
ENSPSIG00000016569	-	100	95.596	ENSGAGG00000001563	-	100	95.596	Gopherus_agassizii
ENSPSIG00000016569	-	100	86.157	ENSHGLG00000016583	PRPF38B	100	85.974	Heterocephalus_glaber_female
ENSPSIG00000016569	-	100	85.974	ENSHGLG00100015525	-	100	85.792	Heterocephalus_glaber_male
ENSPSIG00000016569	-	93	75.189	ENSLACG00000015511	-	96	74.812	Latimeria_chalumnae
ENSPSIG00000016569	-	60	89.058	ENSMOCG00000020285	-	100	85.348	Microtus_ochrogaster
ENSPSIG00000016569	-	56	93.811	ENSMODG00000002350	-	100	86.654	Monodelphis_domestica
ENSPSIG00000016569	-	80	85.175	ENSOPRG00000013543	-	81	85.175	Ochotona_princeps
ENSPSIG00000016569	-	82	66.102	ENSONIG00000010129	-	50	85.470	Oreochromis_niloticus
ENSPSIG00000016569	-	94	75.638	ENSOANG00000007343	-	91	89.865	Ornithorhynchus_anatinus
ENSPSIG00000016569	-	83	63.368	ENSORLG00000015621	-	91	89.375	Oryzias_latipes
ENSPSIG00000016569	-	83	63.368	ENSORLG00020016276	-	91	89.375	Oryzias_latipes_hni
ENSPSIG00000016569	-	81	64.363	ENSORLG00015016270	-	77	89.375	Oryzias_latipes_hsok
ENSPSIG00000016569	-	92	60.506	ENSOMEG00000022050	-	94	88.889	Oryzias_melastigma
ENSPSIG00000016569	-	100	85.064	ENSOGAG00000027048	-	100	84.116	Otolemur_garnettii
ENSPSIG00000016569	-	100	85.375	ENSOARG00000018899	-	100	85.009	Ovis_aries
ENSPSIG00000016569	-	97	65.056	ENSPKIG00000017291	-	71	92.381	Paramormyrops_kingsleyae
ENSPSIG00000016569	-	94	62.998	ENSPKIG00000004815	-	55	79.730	Paramormyrops_kingsleyae
ENSPSIG00000016569	-	83	63.057	ENSPFOG00000004025	-	84	90.000	Poecilia_formosa
ENSPSIG00000016569	-	83	62.208	ENSPREG00000015599	-	86	90.000	Poecilia_reticulata
ENSPSIG00000016569	-	100	83.242	ENSRNOG00000020438	Prpf38b	100	84.335	Rattus_norvegicus
ENSPSIG00000016569	-	92	63.091	ENSSFOG00015011251	-	79	97.351	Scleropages_formosus
ENSPSIG00000016569	-	81	63.002	ENSSLDG00000023487	-	86	90.000	Seriola_lalandi_dorsalis
ENSPSIG00000016569	-	100	89.091	ENSSPUG00000017742	-	100	89.091	Sphenodon_punctatus
ENSPSIG00000016569	-	50	80.783	ENSTNIG00000015299	-	55	86.425	Tetraodon_nigroviridis
ENSPSIG00000016569	-	93	84.540	ENSTBEG00000007504	-	100	84.540	Tupaia_belangeri
ENSPSIG00000016569	-	100	86.654	ENSTTRG00000006479	-	100	86.182	Tursiops_truncatus
ENSPSIG00000016569	-	93	82.249	ENSVPAG00000005541	-	94	82.617	Vicugna_pacos
ENSPSIG00000016569	-	88	77.893	ENSXETG00000005260	prpf38b	96	70.385	Xenopus_tropicalis