EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000016646 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: -
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 19738 bases
Position: chrJH208032.1:1036428-1056165
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000018786	zf-C3HC	PF07967.13	2e-35	1	1
ENSPSIP00000018786	Rsm1	PF08600.10	1e-15	1	2
ENSPSIP00000018786	Rsm1	PF08600.10	1e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000018872	ZC3HC1-201	3177	-	ENSPSIP00000018786	506 (aa)	-	K7GES5

Gene Model

Click here to download ENSPSIG00000016646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000016646	ZC3HC1	99	60.938	ENSG00000091732	ZC3HC1	94	68.078	Homo_sapiens
ENSPSIG00000016646	ZC3HC1	99	42.115	ENSAPOG00000009078	zc3hc1	94	41.980	Acanthochromis_polyacanthus
ENSPSIG00000016646	ZC3HC1	100	60.388	ENSAMEG00000005425	ZC3HC1	95	61.837	Ailuropoda_melanoleuca
ENSPSIG00000016646	ZC3HC1	99	41.075	ENSACIG00000019513	zc3hc1	87	42.950	Amphilophus_citrinellus
ENSPSIG00000016646	ZC3HC1	99	41.683	ENSAOCG00000024310	zc3hc1	94	42.460	Amphiprion_ocellaris
ENSPSIG00000016646	ZC3HC1	94	42.369	ENSAPEG00000004907	zc3hc1	94	42.460	Amphiprion_percula
ENSPSIG00000016646	ZC3HC1	82	43.836	ENSATEG00000016898	zc3hc1	85	42.792	Anabas_testudineus
ENSPSIG00000016646	ZC3HC1	88	62.084	ENSAPLG00000003832	ZC3HC1	99	61.521	Anas_platyrhynchos
ENSPSIG00000016646	ZC3HC1	97	61.569	ENSACAG00000001638	ZC3HC1	96	61.155	Anolis_carolinensis
ENSPSIG00000016646	ZC3HC1	100	59.339	ENSANAG00000022213	ZC3HC1	94	66.775	Aotus_nancymaae
ENSPSIG00000016646	ZC3HC1	87	43.137	ENSACLG00000025033	zc3hc1	95	43.202	Astatotilapia_calliptera
ENSPSIG00000016646	ZC3HC1	85	41.648	ENSAMXG00000036792	zc3hc1	92	39.914	Astyanax_mexicanus
ENSPSIG00000016646	ZC3HC1	100	60.819	ENSBTAG00000011247	ZC3HC1	93	63.180	Bos_taurus
ENSPSIG00000016646	ZC3HC1	100	60.039	ENSCJAG00000010536	ZC3HC1	94	66.775	Callithrix_jacchus
ENSPSIG00000016646	ZC3HC1	100	60.853	ENSCAFG00000001499	-	94	62.322	Canis_familiaris
ENSPSIG00000016646	ZC3HC1	100	61.014	ENSCAFG00000028735	-	93	63.466	Canis_familiaris
ENSPSIG00000016646	ZC3HC1	100	61.014	ENSCAFG00000029401	-	92	63.466	Canis_familiaris
ENSPSIG00000016646	ZC3HC1	100	61.209	ENSCAFG00000031850	-	95	62.705	Canis_familiaris
ENSPSIG00000016646	ZC3HC1	100	61.014	ENSCAFG00020006829	-	93	63.466	Canis_lupus_dingo
ENSPSIG00000016646	ZC3HC1	100	59.806	ENSCAFG00020023333	-	94	65.806	Canis_lupus_dingo
ENSPSIG00000016646	ZC3HC1	100	54.545	ENSCHIG00000014103	ZC3HC1	95	55.601	Capra_hircus
ENSPSIG00000016646	ZC3HC1	100	59.454	ENSTSYG00000002843	ZC3HC1	92	67.450	Carlito_syrichta
ENSPSIG00000016646	ZC3HC1	91	46.336	ENSCAPG00000016300	ZC3HC1	92	59.574	Cavia_aperea
ENSPSIG00000016646	ZC3HC1	100	58.984	ENSCPOG00000014034	ZC3HC1	94	65.472	Cavia_porcellus
ENSPSIG00000016646	ZC3HC1	100	47.563	ENSCCAG00000020384	ZC3HC1	100	53.648	Cebus_capucinus
ENSPSIG00000016646	ZC3HC1	100	60.429	ENSCATG00000023130	ZC3HC1	94	67.427	Cercocebus_atys
ENSPSIG00000016646	ZC3HC1	82	45.991	ENSCLAG00000008260	ZC3HC1	88	45.176	Chinchilla_lanigera
ENSPSIG00000016646	ZC3HC1	74	60.160	ENSCSAG00000009881	ZC3HC1	97	60.160	Chlorocebus_sabaeus
ENSPSIG00000016646	ZC3HC1	90	62.826	ENSCHOG00000011846	ZC3HC1	99	61.874	Choloepus_hoffmanni
ENSPSIG00000016646	ZC3HC1	97	78.093	ENSCPBG00000017519	ZC3HC1	96	77.618	Chrysemys_picta_bellii
ENSPSIG00000016646	ZC3HC1	100	60.234	ENSCANG00000029091	ZC3HC1	94	66.775	Colobus_angolensis_palliatus
ENSPSIG00000016646	ZC3HC1	100	58.285	ENSCGRG00001018805	Zc3hc1	92	64.765	Cricetulus_griseus_chok1gshd
ENSPSIG00000016646	ZC3HC1	100	57.310	ENSCGRG00000017114	Zc3hc1	93	59.958	Cricetulus_griseus_crigri
ENSPSIG00000016646	ZC3HC1	94	41.093	ENSCSEG00000009284	zc3hc1	92	39.351	Cynoglossus_semilaevis
ENSPSIG00000016646	ZC3HC1	87	42.208	ENSCVAG00000011566	zc3hc1	87	42.117	Cyprinodon_variegatus
ENSPSIG00000016646	ZC3HC1	94	45.306	ENSDARG00000062651	zc3hc1	94	44.877	Danio_rerio
ENSPSIG00000016646	ZC3HC1	98	61.368	ENSDNOG00000045016	ZC3HC1	93	62.683	Dasypus_novemcinctus
ENSPSIG00000016646	ZC3HC1	84	60.941	ENSDORG00000008697	Zc3hc1	88	67.480	Dipodomys_ordii
ENSPSIG00000016646	ZC3HC1	91	63.341	ENSEASG00005008789	ZC3HC1	97	63.341	Equus_asinus_asinus
ENSPSIG00000016646	ZC3HC1	98	61.368	ENSECAG00000017886	ZC3HC1	93	62.893	Equus_caballus
ENSPSIG00000016646	ZC3HC1	81	56.024	ENSEEUG00000003123	ZC3HC1	64	66.860	Erinaceus_europaeus
ENSPSIG00000016646	ZC3HC1	98	40.637	ENSELUG00000023168	zc3hc1	90	44.654	Esox_lucius
ENSPSIG00000016646	ZC3HC1	100	60.429	ENSFCAG00000010429	ZC3HC1	94	66.775	Felis_catus
ENSPSIG00000016646	ZC3HC1	91	61.325	ENSFALG00000005006	ZC3HC1	100	60.600	Ficedula_albicollis
ENSPSIG00000016646	ZC3HC1	98	60.000	ENSFDAG00000019897	ZC3HC1	94	66.450	Fukomys_damarensis
ENSPSIG00000016646	ZC3HC1	94	41.851	ENSFHEG00000020149	zc3hc1	94	41.129	Fundulus_heteroclitus
ENSPSIG00000016646	ZC3HC1	86	42.058	ENSGMOG00000002914	zc3hc1	88	42.921	Gadus_morhua
ENSPSIG00000016646	ZC3HC1	97	62.398	ENSGALG00000008003	ZC3HC1	96	62.656	Gallus_gallus
ENSPSIG00000016646	ZC3HC1	87	42.174	ENSGAFG00000016095	zc3hc1	88	42.576	Gambusia_affinis
ENSPSIG00000016646	ZC3HC1	86	44.956	ENSGACG00000019706	zc3hc1	87	44.978	Gasterosteus_aculeatus
ENSPSIG00000016646	ZC3HC1	78	80.051	ENSGAGG00000016106	ZC3HC1	100	78.788	Gopherus_agassizii
ENSPSIG00000016646	ZC3HC1	99	61.133	ENSGGOG00000015504	ZC3HC1	94	68.404	Gorilla_gorilla
ENSPSIG00000016646	ZC3HC1	87	44.150	ENSHBUG00000008347	zc3hc1	87	42.982	Haplochromis_burtoni
ENSPSIG00000016646	ZC3HC1	100	60.980	ENSHGLG00000005085	ZC3HC1	94	66.450	Heterocephalus_glaber_female
ENSPSIG00000016646	ZC3HC1	100	60.784	ENSHGLG00100011395	ZC3HC1	94	66.450	Heterocephalus_glaber_male
ENSPSIG00000016646	ZC3HC1	94	42.623	ENSHCOG00000014309	zc3hc1	94	43.595	Hippocampus_comes
ENSPSIG00000016646	ZC3HC1	98	60.000	ENSSTOG00000023599	-	95	61.111	Ictidomys_tridecemlineatus
ENSPSIG00000016646	ZC3HC1	87	44.035	ENSKMAG00000015315	zc3hc1	82	42.291	Kryptolebias_marmoratus
ENSPSIG00000016646	ZC3HC1	86	42.549	ENSLBEG00000017325	zc3hc1	92	40.611	Labrus_bergylta
ENSPSIG00000016646	ZC3HC1	79	48.449	ENSLACG00000013032	ZC3HC1	92	49.364	Latimeria_chalumnae
ENSPSIG00000016646	ZC3HC1	98	49.216	ENSLOCG00000015963	zc3hc1	96	48.283	Lepisosteus_oculatus
ENSPSIG00000016646	ZC3HC1	100	59.109	ENSLAFG00000001292	ZC3HC1	93	61.667	Loxodonta_africana
ENSPSIG00000016646	ZC3HC1	100	60.234	ENSMFAG00000030176	ZC3HC1	94	67.427	Macaca_fascicularis
ENSPSIG00000016646	ZC3HC1	100	59.144	ENSMMUG00000006155	ZC3HC1	94	67.427	Macaca_mulatta
ENSPSIG00000016646	ZC3HC1	100	60.429	ENSMNEG00000011833	ZC3HC1	94	67.427	Macaca_nemestrina
ENSPSIG00000016646	ZC3HC1	100	60.624	ENSMLEG00000027328	ZC3HC1	94	67.427	Mandrillus_leucophaeus
ENSPSIG00000016646	ZC3HC1	94	43.293	ENSMAMG00000010691	zc3hc1	93	43.558	Mastacembelus_armatus
ENSPSIG00000016646	ZC3HC1	87	43.137	ENSMZEG00005007142	zc3hc1	87	42.763	Maylandia_zebra
ENSPSIG00000016646	ZC3HC1	96	62.348	ENSMGAG00000002977	ZC3HC1	97	62.372	Meleagris_gallopavo
ENSPSIG00000016646	ZC3HC1	82	56.501	ENSMAUG00000017032	Zc3hc1	92	56.501	Mesocricetus_auratus
ENSPSIG00000016646	ZC3HC1	100	60.429	ENSMICG00000009167	ZC3HC1	92	69.799	Microcebus_murinus
ENSPSIG00000016646	ZC3HC1	100	58.674	ENSMOCG00000015239	Zc3hc1	92	65.772	Microtus_ochrogaster
ENSPSIG00000016646	ZC3HC1	87	42.257	ENSMMOG00000002204	zc3hc1	99	43.013	Mola_mola
ENSPSIG00000016646	ZC3HC1	99	51.048	ENSMODG00000014630	ZC3HC1	99	51.331	Monodelphis_domestica
ENSPSIG00000016646	ZC3HC1	85	44.519	ENSMALG00000014447	zc3hc1	88	44.396	Monopterus_albus
ENSPSIG00000016646	ZC3HC1	97	58.182	MGP_CAROLIEiJ_G0028183	Zc3hc1	92	62.752	Mus_caroli
ENSPSIG00000016646	ZC3HC1	97	57.778	ENSMUSG00000039130	Zc3hc1	92	63.087	Mus_musculus
ENSPSIG00000016646	ZC3HC1	100	53.021	MGP_PahariEiJ_G0021941	Zc3hc1	92	56.376	Mus_pahari
ENSPSIG00000016646	ZC3HC1	94	59.329	MGP_SPRETEiJ_G0029183	Zc3hc1	92	63.087	Mus_spretus
ENSPSIG00000016646	ZC3HC1	95	59.305	ENSMPUG00000005297	ZC3HC1	90	60.776	Mustela_putorius_furo
ENSPSIG00000016646	ZC3HC1	68	54.023	ENSMLUG00000029228	-	99	54.023	Myotis_lucifugus
ENSPSIG00000016646	ZC3HC1	100	60.194	ENSMLUG00000000063	-	93	62.839	Myotis_lucifugus
ENSPSIG00000016646	ZC3HC1	94	61.006	ENSNGAG00000019014	Zc3hc1	94	64.495	Nannospalax_galili
ENSPSIG00000016646	ZC3HC1	87	43.013	ENSNBRG00000004577	zc3hc1	87	42.637	Neolamprologus_brichardi
ENSPSIG00000016646	ZC3HC1	99	59.961	ENSNLEG00000012698	ZC3HC1	94	66.775	Nomascus_leucogenys
ENSPSIG00000016646	ZC3HC1	98	61.089	ENSMEUG00000011023	ZC3HC1	95	61.728	Notamacropus_eugenii
ENSPSIG00000016646	ZC3HC1	64	62.214	ENSOPRG00000007867	-	59	68.444	Ochotona_princeps
ENSPSIG00000016646	ZC3HC1	100	58.824	ENSODEG00000014604	ZC3HC1	92	66.779	Octodon_degus
ENSPSIG00000016646	ZC3HC1	87	43.137	ENSONIG00000011644	zc3hc1	87	42.763	Oreochromis_niloticus
ENSPSIG00000016646	ZC3HC1	91	57.325	ENSOANG00000011460	ZC3HC1	100	57.325	Ornithorhynchus_anatinus
ENSPSIG00000016646	ZC3HC1	100	57.393	ENSOCUG00000017137	ZC3HC1	93	59.167	Oryctolagus_cuniculus
ENSPSIG00000016646	ZC3HC1	98	40.583	ENSORLG00000014409	zc3hc1	86	42.384	Oryzias_latipes
ENSPSIG00000016646	ZC3HC1	98	40.583	ENSORLG00020015874	zc3hc1	86	42.384	Oryzias_latipes_hni
ENSPSIG00000016646	ZC3HC1	98	40.784	ENSORLG00015014641	zc3hc1	86	42.163	Oryzias_latipes_hsok
ENSPSIG00000016646	ZC3HC1	86	42.444	ENSOMEG00000020604	zc3hc1	87	42.953	Oryzias_melastigma
ENSPSIG00000016646	ZC3HC1	86	43.111	ENSOMEG00000000215	zc3hc1	87	43.516	Oryzias_melastigma
ENSPSIG00000016646	ZC3HC1	100	55.556	ENSOGAG00000026193	ZC3HC1	93	57.862	Otolemur_garnettii
ENSPSIG00000016646	ZC3HC1	100	61.047	ENSOARG00000004907	ZC3HC1	94	62.245	Ovis_aries
ENSPSIG00000016646	ZC3HC1	99	60.938	ENSPPAG00000043172	ZC3HC1	94	68.078	Pan_paniscus
ENSPSIG00000016646	ZC3HC1	100	59.844	ENSPPRG00000001004	ZC3HC1	94	66.450	Panthera_pardus
ENSPSIG00000016646	ZC3HC1	100	60.429	ENSPTIG00000007823	ZC3HC1	94	66.775	Panthera_tigris_altaica
ENSPSIG00000016646	ZC3HC1	99	60.938	ENSPTRG00000019685	ZC3HC1	94	68.078	Pan_troglodytes
ENSPSIG00000016646	ZC3HC1	100	59.339	ENSPANG00000014229	ZC3HC1	92	68.792	Papio_anubis
ENSPSIG00000016646	ZC3HC1	93	45.194	ENSPKIG00000007172	zc3hc1	93	44.309	Paramormyrops_kingsleyae
ENSPSIG00000016646	ZC3HC1	93	41.736	ENSPMGG00000003548	zc3hc1	91	51.866	Periophthalmus_magnuspinnatus
ENSPSIG00000016646	ZC3HC1	100	59.339	ENSPEMG00000000514	Zc3hc1	92	65.772	Peromyscus_maniculatus_bairdii
ENSPSIG00000016646	ZC3HC1	96	59.877	ENSPCIG00000020619	ZC3HC1	100	62.469	Phascolarctos_cinereus
ENSPSIG00000016646	ZC3HC1	87	42.117	ENSPFOG00000003466	zc3hc1	88	41.164	Poecilia_formosa
ENSPSIG00000016646	ZC3HC1	87	41.739	ENSPLAG00000022211	zc3hc1	88	40.733	Poecilia_latipinna
ENSPSIG00000016646	ZC3HC1	87	42.117	ENSPMEG00000001458	zc3hc1	90	40.492	Poecilia_mexicana
ENSPSIG00000016646	ZC3HC1	87	42.082	ENSPREG00000004004	zc3hc1	88	41.075	Poecilia_reticulata
ENSPSIG00000016646	ZC3HC1	99	54.864	ENSPPYG00000017998	ZC3HC1	93	56.904	Pongo_abelii
ENSPSIG00000016646	ZC3HC1	92	60.897	ENSPCAG00000001182	ZC3HC1	100	60.256	Procavia_capensis
ENSPSIG00000016646	ZC3HC1	100	60.624	ENSPCOG00000017354	ZC3HC1	92	69.128	Propithecus_coquereli
ENSPSIG00000016646	ZC3HC1	100	56.725	ENSPVAG00000003195	ZC3HC1	95	57.819	Pteropus_vampyrus
ENSPSIG00000016646	ZC3HC1	87	43.137	ENSPNYG00000020692	zc3hc1	87	42.763	Pundamilia_nyererei
ENSPSIG00000016646	ZC3HC1	81	44.965	ENSPNAG00000020746	zc3hc1	82	44.028	Pygocentrus_nattereri
ENSPSIG00000016646	ZC3HC1	100	57.004	ENSRNOG00000010154	Zc3hc1	93	59.414	Rattus_norvegicus
ENSPSIG00000016646	ZC3HC1	91	62.907	ENSRBIG00000029409	ZC3HC1	100	68.794	Rhinopithecus_bieti
ENSPSIG00000016646	ZC3HC1	100	60.234	ENSRROG00000041831	ZC3HC1	94	66.775	Rhinopithecus_roxellana
ENSPSIG00000016646	ZC3HC1	82	61.871	ENSSBOG00000032787	ZC3HC1	92	74.757	Saimiri_boliviensis_boliviensis
ENSPSIG00000016646	ZC3HC1	91	62.419	ENSSHAG00000002529	ZC3HC1	99	61.834	Sarcophilus_harrisii
ENSPSIG00000016646	ZC3HC1	91	48.291	ENSSFOG00015003667	zc3hc1	86	46.567	Scleropages_formosus
ENSPSIG00000016646	ZC3HC1	87	43.133	ENSSMAG00000000647	zc3hc1	79	43.791	Scophthalmus_maximus
ENSPSIG00000016646	ZC3HC1	90	42.181	ENSSDUG00000004241	zc3hc1	90	42.650	Seriola_dumerili
ENSPSIG00000016646	ZC3HC1	87	42.516	ENSSLDG00000025056	zc3hc1	85	43.450	Seriola_lalandi_dorsalis
ENSPSIG00000016646	ZC3HC1	99	53.516	ENSSARG00000012013	ZC3HC1	93	55.765	Sorex_araneus
ENSPSIG00000016646	ZC3HC1	88	60.667	ENSSPUG00000000778	ZC3HC1	88	60.667	Sphenodon_punctatus
ENSPSIG00000016646	ZC3HC1	98	41.120	ENSSPAG00000020041	zc3hc1	94	41.734	Stegastes_partitus
ENSPSIG00000016646	ZC3HC1	100	59.844	ENSSSCG00000016565	ZC3HC1	100	61.965	Sus_scrofa
ENSPSIG00000016646	ZC3HC1	87	43.498	ENSTRUG00000020077	zc3hc1	87	40.899	Takifugu_rubripes
ENSPSIG00000016646	ZC3HC1	90	42.117	ENSTNIG00000007585	zc3hc1	93	41.758	Tetraodon_nigroviridis
ENSPSIG00000016646	ZC3HC1	99	51.267	ENSTBEG00000005216	ZC3HC1	93	52.621	Tupaia_belangeri
ENSPSIG00000016646	ZC3HC1	94	62.893	ENSTTRG00000008458	ZC3HC1	98	62.893	Tursiops_truncatus
ENSPSIG00000016646	ZC3HC1	100	60.429	ENSUAMG00000020249	ZC3HC1	93	62.839	Ursus_americanus
ENSPSIG00000016646	ZC3HC1	100	60.429	ENSUMAG00000009268	ZC3HC1	93	62.839	Ursus_maritimus
ENSPSIG00000016646	ZC3HC1	75	64.000	ENSVPAG00000010846	ZC3HC1	70	64.000	Vicugna_pacos
ENSPSIG00000016646	ZC3HC1	95	60.123	ENSVVUG00000012386	ZC3HC1	92	62.637	Vulpes_vulpes
ENSPSIG00000016646	ZC3HC1	88	50.442	ENSXETG00000033900	zc3hc1	91	49.558	Xenopus_tropicalis
ENSPSIG00000016646	ZC3HC1	87	41.703	ENSXCOG00000013570	zc3hc1	93	38.149	Xiphophorus_couchianus
ENSPSIG00000016646	ZC3HC1	87	41.739	ENSXMAG00000010979	zc3hc1	94	39.911	Xiphophorus_maculatus