EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPSIG00000016892 (Gene tree)
Gene ID
102461623
Gene Symbol
PABPC4
Alias
-
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Pelodiscus_sinensis
Status
putative
Strand
Minus strand
Length
29303 bases
Position
chrJH224670.1:118390-147692
Accession
102461623
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPSIP00000019009PABPPF00658.183.2e-3211
ENSPSIP00000019009RRM_5PF13893.61e-0912
ENSPSIP00000019009RRM_5PF13893.61e-0922
ENSPSIP00000019009RRM_1PF00076.221.8e-9214
ENSPSIP00000019009RRM_1PF00076.221.8e-9224
ENSPSIP00000019009RRM_1PF00076.221.8e-9234
ENSPSIP00000019009RRM_1PF00076.221.8e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPSIT00000019095PABPC4-2016656XM_006139134ENSPSIP00000019009630 (aa)XP_006139196K7GFE8
Gene Model
Click here to download ENSPSIG00000016892's gene model file
Pathways
Pathway IDPathway NameSource
pss03013RNA transportKEGG
pss03015mRNA surveillance pathwayKEGG
pss03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016892's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPSIG00000016892PABPC45837.500ENSPSIG00000013861CELF25338.372
ENSPSIG00000016892PABPC45138.372ENSPSIG00000003922CELF18238.372
ENSPSIG00000016892PABPC46681.446ENSPSIG00000013289PABPC1L9881.446
ENSPSIG00000016892PABPC45833.553ENSPSIG00000013736ELAVL19533.553
ENSPSIG00000016892PABPC49979.683ENSPSIG00000003719PABPC19880.032
ENSPSIG00000016892PABPC45934.940ENSPSIG00000008545ELAVL49034.940
ENSPSIG00000016892PABPC45636.145ENSPSIG00000015330ELAVL210036.145
ENSPSIG00000016892PABPC45241.333ENSPSIG00000009565SF3B45440.940
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPSIG00000016892PABPC410091.746ENSG00000090621PABPC410098.450Homo_sapiens
ENSPSIG00000016892PABPC49986.645ENSAPOG00000001161pabpc49986.614Acanthochromis_polyacanthus
ENSPSIG00000016892PABPC49953.698ENSAMEG00000015083-9953.698Ailuropoda_melanoleuca
ENSPSIG00000016892PABPC410087.709ENSAMEG00000011535-9987.709Ailuropoda_melanoleuca
ENSPSIG00000016892PABPC410086.772ENSACIG00000023343pabpc49987.402Amphilophus_citrinellus
ENSPSIG00000016892PABPC49986.963ENSAOCG00000021529pabpc49986.929Amphiprion_ocellaris
ENSPSIG00000016892PABPC49986.963ENSAPEG00000019196pabpc49986.929Amphiprion_percula
ENSPSIG00000016892PABPC49986.349ENSATEG00000007402pabpc49986.478Anabas_testudineus
ENSPSIG00000016892PABPC410098.095ENSAPLG00000009729-10098.095Anas_platyrhynchos
ENSPSIG00000016892PABPC49995.349ENSACAG00000002544PABPC410095.349Anolis_carolinensis
ENSPSIG00000016892PABPC410091.746ENSANAG00000025079PABPC49991.746Aotus_nancymaae
ENSPSIG00000016892PABPC410086.142ENSACLG00000019558pabpc49986.772Astatotilapia_calliptera
ENSPSIG00000016892PABPC410082.019ENSAMXG00000018779pabpc49982.650Astyanax_mexicanus
ENSPSIG00000016892PABPC45785.030ENSBTAG00000048536-9385.030Bos_taurus
ENSPSIG00000016892PABPC410088.043ENSBTAG00000017125PABPC49988.665Bos_taurus
ENSPSIG00000016892PABPC47883.197ENSCJAG00000045953-9383.197Callithrix_jacchus
ENSPSIG00000016892PABPC410091.587ENSCJAG00000002512-9991.587Callithrix_jacchus
ENSPSIG00000016892PABPC410091.905ENSCAFG00000003081PABPC49991.905Canis_familiaris
ENSPSIG00000016892PABPC49692.371ENSCAFG00020004161PABPC49987.860Canis_lupus_dingo
ENSPSIG00000016892PABPC410070.607ENSCHIG00000023385-9970.607Capra_hircus
ENSPSIG00000016892PABPC410087.860ENSCHIG00000019398-9987.860Capra_hircus
ENSPSIG00000016892PABPC410091.746ENSTSYG00000006532PABPC49991.746Carlito_syrichta
ENSPSIG00000016892PABPC49991.547ENSCAPG00000015984PABPC49991.547Cavia_aperea
ENSPSIG00000016892PABPC410091.746ENSCPOG00000009552PABPC49991.746Cavia_porcellus
ENSPSIG00000016892PABPC410091.587ENSCCAG00000037306PABPC49991.587Cebus_capucinus
ENSPSIG00000016892PABPC410091.746ENSCATG00000042164PABPC49991.746Cercocebus_atys
ENSPSIG00000016892PABPC410091.429ENSCLAG00000011899PABPC49991.429Chinchilla_lanigera
ENSPSIG00000016892PABPC410087.709ENSCSAG00000001135PABPC49987.709Chlorocebus_sabaeus
ENSPSIG00000016892PABPC48691.557ENSCHOG00000005327PABPC48191.557Choloepus_hoffmanni
ENSPSIG00000016892PABPC410099.365ENSCPBG00000001038PABPC410099.365Chrysemys_picta_bellii
ENSPSIG00000016892PABPC49991.626ENSCANG00000034177PABPC49991.626Colobus_angolensis_palliatus
ENSPSIG00000016892PABPC49989.068ENSCGRG00001018166Pabpc410088.504Cricetulus_griseus_chok1gshd
ENSPSIG00000016892PABPC49889.070ENSCGRG00000009777Pabpc410088.498Cricetulus_griseus_crigri
ENSPSIG00000016892PABPC49985.804ENSCSEG00000000130pabpc49986.435Cynoglossus_semilaevis
ENSPSIG00000016892PABPC49986.581ENSCVAG00000019246pabpc49987.220Cyprinodon_variegatus
ENSPSIG00000016892PABPC49988.273ENSDARG00000059259pabpc410088.816Danio_rerio
ENSPSIG00000016892PABPC49991.234ENSDNOG00000018444-9991.234Dasypus_novemcinctus
ENSPSIG00000016892PABPC410088.647ENSDORG00000011581Pabpc49988.647Dipodomys_ordii
ENSPSIG00000016892PABPC48759.890ENSETEG00000009172-9959.890Echinops_telfairi
ENSPSIG00000016892PABPC410096.875ENSETEG00000018453-8496.875Echinops_telfairi
ENSPSIG00000016892PABPC49978.344ENSEBUG00000000992pabpc49978.344Eptatretus_burgeri
ENSPSIG00000016892PABPC49779.160ENSEBUG00000013782pabpc49978.956Eptatretus_burgeri
ENSPSIG00000016892PABPC410087.860ENSEASG00005014119PABPC49987.860Equus_asinus_asinus
ENSPSIG00000016892PABPC410087.860ENSECAG00000009396PABPC49987.860Equus_caballus
ENSPSIG00000016892PABPC49885.935ENSEEUG00000002962PABPC49985.584Erinaceus_europaeus
ENSPSIG00000016892PABPC49987.005ENSELUG00000003195pabpc49987.421Esox_lucius
ENSPSIG00000016892PABPC410091.905ENSFCAG00000015254-9991.905Felis_catus
ENSPSIG00000016892PABPC410097.302ENSFALG00000000543PABPC410097.302Ficedula_albicollis
ENSPSIG00000016892PABPC49058.209ENSFDAG00000010581-10055.363Fukomys_damarensis
ENSPSIG00000016892PABPC410086.646ENSFDAG00000020016-9987.557Fukomys_damarensis
ENSPSIG00000016892PABPC410086.299ENSFHEG00000007548pabpc49986.929Fundulus_heteroclitus
ENSPSIG00000016892PABPC410084.748ENSGMOG00000019025pabpc49985.377Gadus_morhua
ENSPSIG00000016892PABPC410097.460ENSGALG00000003800PABPC410097.460Gallus_gallus
ENSPSIG00000016892PABPC49993.632ENSGAFG00000018195pabpc49897.222Gambusia_affinis
ENSPSIG00000016892PABPC49984.724ENSGACG00000007179pabpc49985.354Gasterosteus_aculeatus
ENSPSIG00000016892PABPC410099.048ENSGAGG00000001888PABPC410099.048Gopherus_agassizii
ENSPSIG00000016892PABPC410091.746ENSGGOG00000004002PABPC49991.746Gorilla_gorilla
ENSPSIG00000016892PABPC410085.984ENSHBUG00000020206pabpc49986.614Haplochromis_burtoni
ENSPSIG00000016892PABPC410091.587ENSHGLG00000011162PABPC49991.587Heterocephalus_glaber_female
ENSPSIG00000016892PABPC410091.587ENSHGLG00100001580PABPC49991.587Heterocephalus_glaber_male
ENSPSIG00000016892PABPC49986.414ENSHCOG00000012694pabpc49987.046Hippocampus_comes
ENSPSIG00000016892PABPC49886.677ENSIPUG00000016620pabpc49986.772Ictalurus_punctatus
ENSPSIG00000016892PABPC410089.683ENSSTOG00000010416PABPC49989.683Ictidomys_tridecemlineatus
ENSPSIG00000016892PABPC410086.781ENSJJAG00000007781Pabpc49987.247Jaculus_jaculus
ENSPSIG00000016892PABPC410085.849ENSKMAG00000013597pabpc49986.478Kryptolebias_marmoratus
ENSPSIG00000016892PABPC410085.714ENSLBEG00000013654pabpc49986.342Labrus_bergylta
ENSPSIG00000016892PABPC410093.375ENSLACG00000011907PABPC410093.375Latimeria_chalumnae
ENSPSIG00000016892PABPC410089.812ENSLOCG00000001877pabpc410090.596Lepisosteus_oculatus
ENSPSIG00000016892PABPC410089.841ENSLAFG00000000151PABPC49989.841Loxodonta_africana
ENSPSIG00000016892PABPC410091.746ENSMFAG00000041481PABPC49991.746Macaca_fascicularis
ENSPSIG00000016892PABPC410087.709ENSMMUG00000007497PABPC49987.709Macaca_mulatta
ENSPSIG00000016892PABPC410091.587ENSMNEG00000043054PABPC49991.587Macaca_nemestrina
ENSPSIG00000016892PABPC410091.746ENSMLEG00000040716PABPC49991.746Mandrillus_leucophaeus
ENSPSIG00000016892PABPC49986.328ENSMAMG00000010025pabpc49986.614Mastacembelus_armatus
ENSPSIG00000016892PABPC410085.984ENSMZEG00005006141pabpc49986.614Maylandia_zebra
ENSPSIG00000016892PABPC49993.526ENSMGAG00000005408PABPC410093.526Meleagris_gallopavo
ENSPSIG00000016892PABPC47284.135ENSMAUG00000001295-9784.135Mesocricetus_auratus
ENSPSIG00000016892PABPC47694.792ENSMAUG00000019763-8489.908Mesocricetus_auratus
ENSPSIG00000016892PABPC45782.635ENSMAUG00000004089-8982.635Mesocricetus_auratus
ENSPSIG00000016892PABPC48988.968ENSMICG00000016633-10089.858Microcebus_murinus
ENSPSIG00000016892PABPC49978.114ENSMICG00000036729-9978.470Microcebus_murinus
ENSPSIG00000016892PABPC49991.520ENSMOCG00000006763Pabpc49990.952Microtus_ochrogaster
ENSPSIG00000016892PABPC410083.728ENSMMOG00000002363pabpc49984.858Mola_mola
ENSPSIG00000016892PABPC45974.133ENSMODG00000018051-9674.133Monodelphis_domestica
ENSPSIG00000016892PABPC410090.701ENSMODG00000017657-10090.701Monodelphis_domestica
ENSPSIG00000016892PABPC49985.895ENSMALG00000011017pabpc49985.871Monopterus_albus
ENSPSIG00000016892PABPC49977.540MGP_CAROLIEiJ_G0024864-9976.522Mus_caroli
ENSPSIG00000016892PABPC410085.888MGP_CAROLIEiJ_G0026435-10097.872Mus_caroli
ENSPSIG00000016892PABPC410090.952ENSMUSG00000011257Pabpc410097.024Mus_musculus
ENSPSIG00000016892PABPC49986.154MGP_PahariEiJ_G0028765Pabpc410098.582Mus_pahari
ENSPSIG00000016892PABPC49971.611MGP_SPRETEiJ_G0027415Pabpc410097.872Mus_spretus
ENSPSIG00000016892PABPC49550.166ENSMPUG00000006836-10050.166Mustela_putorius_furo
ENSPSIG00000016892PABPC410087.860ENSMPUG00000014414-9987.860Mustela_putorius_furo
ENSPSIG00000016892PABPC410090.000ENSMLUG00000012068PABPC49990.000Myotis_lucifugus
ENSPSIG00000016892PABPC410089.683ENSNGAG00000018292Pabpc49989.683Nannospalax_galili
ENSPSIG00000016892PABPC46691.667ENSNBRG00000010047-7291.667Neolamprologus_brichardi
ENSPSIG00000016892PABPC46097.115ENSNBRG00000009708pabpc49897.115Neolamprologus_brichardi
ENSPSIG00000016892PABPC410091.746ENSNLEG00000011928PABPC49991.746Nomascus_leucogenys
ENSPSIG00000016892PABPC48593.263ENSOPRG00000011984PABPC48793.263Ochotona_princeps
ENSPSIG00000016892PABPC45384.286ENSODEG00000013457-10084.286Octodon_degus
ENSPSIG00000016892PABPC410091.270ENSODEG00000006592-9991.270Octodon_degus
ENSPSIG00000016892PABPC49980.753ENSODEG00000017434-9981.184Octodon_degus
ENSPSIG00000016892PABPC410085.984ENSONIG00000008176pabpc49986.614Oreochromis_niloticus
ENSPSIG00000016892PABPC410096.825ENSOANG00000010001PABPC410096.825Ornithorhynchus_anatinus
ENSPSIG00000016892PABPC49687.658ENSOCUG00000000562PABPC48887.658Oryctolagus_cuniculus
ENSPSIG00000016892PABPC49993.827ENSORLG00000017479pabpc49993.827Oryzias_latipes
ENSPSIG00000016892PABPC49993.827ENSORLG00020018644pabpc49993.827Oryzias_latipes_hni
ENSPSIG00000016892PABPC49993.827ENSORLG00015015042pabpc49993.827Oryzias_latipes_hsok
ENSPSIG00000016892PABPC49986.306ENSOMEG00000014410pabpc49986.321Oryzias_melastigma
ENSPSIG00000016892PABPC410087.771ENSOGAG00000004067PABPC49988.390Otolemur_garnettii
ENSPSIG00000016892PABPC410087.860ENSOARG00000020060PABPC49987.860Ovis_aries
ENSPSIG00000016892PABPC410091.746ENSPPAG00000043625PABPC49991.746Pan_paniscus
ENSPSIG00000016892PABPC410091.905ENSPPRG00000024727PABPC49991.905Panthera_pardus
ENSPSIG00000016892PABPC410091.905ENSPTIG00000005829PABPC49991.905Panthera_tigris_altaica
ENSPSIG00000016892PABPC410091.746ENSPTRG00000000573PABPC49991.746Pan_troglodytes
ENSPSIG00000016892PABPC410091.905ENSPANG00000009484PABPC49991.905Papio_anubis
ENSPSIG00000016892PABPC49988.328ENSPKIG00000025356pabpc49988.959Paramormyrops_kingsleyae
ENSPSIG00000016892PABPC410084.069ENSPMGG00000009073pabpc49984.069Periophthalmus_magnuspinnatus
ENSPSIG00000016892PABPC49985.759ENSPEMG00000024193-9985.759Peromyscus_maniculatus_bairdii
ENSPSIG00000016892PABPC410090.635ENSPEMG00000023569-9990.635Peromyscus_maniculatus_bairdii
ENSPSIG00000016892PABPC49772.393ENSPMAG00000007885pabpc49972.366Petromyzon_marinus
ENSPSIG00000016892PABPC48975.475ENSPMAG00000002836pabpc410076.684Petromyzon_marinus
ENSPSIG00000016892PABPC49997.852ENSPCIG00000020674PABPC410097.852Phascolarctos_cinereus
ENSPSIG00000016892PABPC410085.354ENSPFOG00000002682pabpc49986.614Poecilia_formosa
ENSPSIG00000016892PABPC410085.512ENSPLAG00000010112pabpc49986.772Poecilia_latipinna
ENSPSIG00000016892PABPC49986.010ENSPMEG00000019739pabpc49986.614Poecilia_mexicana
ENSPSIG00000016892PABPC410086.299ENSPREG00000001589pabpc49986.929Poecilia_reticulata
ENSPSIG00000016892PABPC410087.709ENSPPYG00000001506PABPC49987.709Pongo_abelii
ENSPSIG00000016892PABPC410083.156ENSPCAG00000003341PABPC49983.156Procavia_capensis
ENSPSIG00000016892PABPC49973.239ENSPCOG00000025882-9971.429Propithecus_coquereli
ENSPSIG00000016892PABPC410090.967ENSPCOG00000023725-9991.601Propithecus_coquereli
ENSPSIG00000016892PABPC49987.037ENSPVAG00000002187PABPC49987.037Pteropus_vampyrus
ENSPSIG00000016892PABPC410086.142ENSPNYG00000006134pabpc49986.772Pundamilia_nyererei
ENSPSIG00000016892PABPC410086.698ENSPNAG00000024355pabpc410087.324Pygocentrus_nattereri
ENSPSIG00000016892PABPC410086.003ENSRNOG00000028592AABR07035074.19986.003Rattus_norvegicus
ENSPSIG00000016892PABPC410088.180ENSRNOG00000015642Pabpc49988.180Rattus_norvegicus
ENSPSIG00000016892PABPC410091.746ENSRBIG00000039761PABPC49991.746Rhinopithecus_bieti
ENSPSIG00000016892PABPC410091.746ENSRROG00000033355PABPC49991.746Rhinopithecus_roxellana
ENSPSIG00000016892PABPC410091.746ENSSBOG00000026193PABPC49991.746Saimiri_boliviensis_boliviensis
ENSPSIG00000016892PABPC410094.603ENSSHAG00000018139PABPC410094.603Sarcophilus_harrisii
ENSPSIG00000016892PABPC49989.309ENSSFOG00015023514pabpc49989.309Scleropages_formosus
ENSPSIG00000016892PABPC49985.918ENSSMAG00000009007pabpc49986.551Scophthalmus_maximus
ENSPSIG00000016892PABPC49986.645ENSSDUG00000012683pabpc49986.614Seriola_dumerili
ENSPSIG00000016892PABPC49986.645ENSSLDG00000013025pabpc49986.614Seriola_lalandi_dorsalis
ENSPSIG00000016892PABPC410081.032ENSSARG00000000310PABPC49981.032Sorex_araneus
ENSPSIG00000016892PABPC410096.508ENSSPUG00000003204PABPC410096.508Sphenodon_punctatus
ENSPSIG00000016892PABPC49986.645ENSSPAG00000009252pabpc49986.614Stegastes_partitus
ENSPSIG00000016892PABPC410092.063ENSSSCG00000003660-9992.063Sus_scrofa
ENSPSIG00000016892PABPC48946.372ENSSSCG00000036170-9646.726Sus_scrofa
ENSPSIG00000016892PABPC410092.890ENSTGUG00000001266PABPC410092.890Taeniopygia_guttata
ENSPSIG00000016892PABPC49986.234ENSTRUG00000005907pabpc49986.867Takifugu_rubripes
ENSPSIG00000016892PABPC49982.166ENSTNIG00000016902pabpc49982.166Tetraodon_nigroviridis
ENSPSIG00000016892PABPC49977.104ENSTBEG00000009035PABPC49977.104Tupaia_belangeri
ENSPSIG00000016892PABPC49967.380ENSTTRG00000014340PABPC49975.926Tursiops_truncatus
ENSPSIG00000016892PABPC410091.905ENSUAMG00000000303PABPC49991.905Ursus_americanus
ENSPSIG00000016892PABPC410091.892ENSUMAG00000019585PABPC49991.892Ursus_maritimus
ENSPSIG00000016892PABPC47973.156ENSVPAG00000010041PABPC47373.156Vicugna_pacos
ENSPSIG00000016892PABPC410091.905ENSVVUG00000005215PABPC49991.905Vulpes_vulpes
ENSPSIG00000016892PABPC410087.778ENSXETG00000010946pabpc410087.778Xenopus_tropicalis
ENSPSIG00000016892PABPC46199.405ENSXETG00000027221-10099.405Xenopus_tropicalis
ENSPSIG00000016892PABPC49992.208ENSXCOG00000013190pabpc49693.396Xiphophorus_couchianus
ENSPSIG00000016892PABPC410086.142ENSXMAG00000019007pabpc49986.772Xiphophorus_maculatus

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