EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000017307 (Gene tree)
Gene ID: 102454438
Gene Symbol: CNOT6
Alias: -
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 35266 bases
Position: chrJH224652.1:403288-438553
Accession: 102454438
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000019500	Exo_endo_phos	PF03372.23	5.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000019591	CNOT6-201	1635	XM_006138203	ENSPSIP00000019500	544 (aa)	XP_006138265	K7GGT9

Gene Model

Click here to download ENSPSIG00000017307's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000017307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000017307	CNOT6	100	77.106	ENSPSIG00000016241	CNOT6L	97	77.106

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000017307	CNOT6	100	95.588	ENSG00000113300	CNOT6	98	95.588	Homo_sapiens
ENSPSIG00000017307	CNOT6	100	87.912	ENSAPOG00000009994	cnot6b	98	87.546	Acanthochromis_polyacanthus
ENSPSIG00000017307	CNOT6	100	96.337	ENSAMEG00000000949	CNOT6	96	96.337	Ailuropoda_melanoleuca
ENSPSIG00000017307	CNOT6	100	86.813	ENSACIG00000016566	cnot6b	98	86.447	Amphilophus_citrinellus
ENSPSIG00000017307	CNOT6	100	87.912	ENSAOCG00000006893	cnot6b	98	87.546	Amphiprion_ocellaris
ENSPSIG00000017307	CNOT6	100	87.912	ENSAPEG00000016949	cnot6b	98	87.546	Amphiprion_percula
ENSPSIG00000017307	CNOT6	100	86.081	ENSATEG00000007862	cnot6b	98	85.714	Anabas_testudineus
ENSPSIG00000017307	CNOT6	100	98.529	ENSAPLG00000012715	CNOT6	97	98.529	Anas_platyrhynchos
ENSPSIG00000017307	CNOT6	100	95.588	ENSACAG00000016548	CNOT6	98	95.588	Anolis_carolinensis
ENSPSIG00000017307	CNOT6	100	95.956	ENSANAG00000030436	CNOT6	94	95.956	Aotus_nancymaae
ENSPSIG00000017307	CNOT6	100	85.714	ENSACLG00000008279	cnot6b	98	86.264	Astatotilapia_calliptera
ENSPSIG00000017307	CNOT6	100	86.422	ENSAMXG00000034694	cnot6b	98	86.422	Astyanax_mexicanus
ENSPSIG00000017307	CNOT6	100	87.890	ENSAMXG00000019140	cnot6a	98	87.890	Astyanax_mexicanus
ENSPSIG00000017307	CNOT6	100	95.772	ENSBTAG00000017362	CNOT6	98	95.772	Bos_taurus
ENSPSIG00000017307	CNOT6	100	95.772	ENSCJAG00000009795	CNOT6	98	95.772	Callithrix_jacchus
ENSPSIG00000017307	CNOT6	100	96.691	ENSCAFG00000000464	CNOT6	98	96.691	Canis_familiaris
ENSPSIG00000017307	CNOT6	100	96.691	ENSCAFG00020002441	CNOT6	98	96.691	Canis_lupus_dingo
ENSPSIG00000017307	CNOT6	100	95.588	ENSCHIG00000019100	CNOT6	98	95.588	Capra_hircus
ENSPSIG00000017307	CNOT6	100	94.669	ENSTSYG00000003982	CNOT6	98	94.669	Carlito_syrichta
ENSPSIG00000017307	CNOT6	100	90.257	ENSCPOG00000035657	CNOT6	98	90.257	Cavia_porcellus
ENSPSIG00000017307	CNOT6	100	91.360	ENSCCAG00000033670	CNOT6	98	91.360	Cebus_capucinus
ENSPSIG00000017307	CNOT6	100	95.772	ENSCATG00000042014	CNOT6	98	95.772	Cercocebus_atys
ENSPSIG00000017307	CNOT6	100	94.118	ENSCLAG00000010489	CNOT6	98	94.118	Chinchilla_lanigera
ENSPSIG00000017307	CNOT6	100	95.772	ENSCSAG00000008165	CNOT6	98	95.772	Chlorocebus_sabaeus
ENSPSIG00000017307	CNOT6	100	95.404	ENSCHOG00000009680	CNOT6	98	95.404	Choloepus_hoffmanni
ENSPSIG00000017307	CNOT6	100	99.632	ENSCPBG00000008908	CNOT6	98	99.632	Chrysemys_picta_bellii
ENSPSIG00000017307	CNOT6	100	95.956	ENSCANG00000026756	CNOT6	98	95.956	Colobus_angolensis_palliatus
ENSPSIG00000017307	CNOT6	100	93.750	ENSCGRG00001011452	Cnot6	98	93.750	Cricetulus_griseus_chok1gshd
ENSPSIG00000017307	CNOT6	100	92.096	ENSCGRG00000010407	Cnot6	98	92.096	Cricetulus_griseus_crigri
ENSPSIG00000017307	CNOT6	100	86.996	ENSCSEG00000010939	cnot6b	98	86.630	Cynoglossus_semilaevis
ENSPSIG00000017307	CNOT6	100	86.422	ENSCVAG00000010538	cnot6b	98	86.055	Cyprinodon_variegatus
ENSPSIG00000017307	CNOT6	100	85.138	ENSDARG00000101072	cnot6b	98	85.138	Danio_rerio
ENSPSIG00000017307	CNOT6	100	87.339	ENSDARG00000008255	cnot6a	98	87.339	Danio_rerio
ENSPSIG00000017307	CNOT6	100	96.140	ENSDNOG00000041644	CNOT6	98	96.140	Dasypus_novemcinctus
ENSPSIG00000017307	CNOT6	100	84.375	ENSDORG00000001708	Cnot6	98	84.375	Dipodomys_ordii
ENSPSIG00000017307	CNOT6	100	76.374	ENSETEG00000006975	CNOT6	98	76.374	Echinops_telfairi
ENSPSIG00000017307	CNOT6	100	95.221	ENSEASG00005012794	-	98	95.221	Equus_asinus_asinus
ENSPSIG00000017307	CNOT6	92	89.800	ENSEASG00005012957	-	99	89.800	Equus_asinus_asinus
ENSPSIG00000017307	CNOT6	100	95.956	ENSECAG00000019325	CNOT6	98	95.956	Equus_caballus
ENSPSIG00000017307	CNOT6	100	90.074	ENSECAG00000012704	-	97	90.074	Equus_caballus
ENSPSIG00000017307	CNOT6	100	95.037	ENSEEUG00000015382	CNOT6	98	95.037	Erinaceus_europaeus
ENSPSIG00000017307	CNOT6	100	84.116	ENSELUG00000015981	cnot6b	98	83.935	Esox_lucius
ENSPSIG00000017307	CNOT6	100	83.119	ENSELUG00000024580	cnot6a	98	83.119	Esox_lucius
ENSPSIG00000017307	CNOT6	100	96.507	ENSFCAG00000001881	CNOT6	98	96.507	Felis_catus
ENSPSIG00000017307	CNOT6	100	98.713	ENSFALG00000007699	CNOT6	98	98.713	Ficedula_albicollis
ENSPSIG00000017307	CNOT6	100	93.934	ENSFDAG00000001999	CNOT6	98	93.934	Fukomys_damarensis
ENSPSIG00000017307	CNOT6	67	83.699	ENSFHEG00000013756	cnot6b	91	92.308	Fundulus_heteroclitus
ENSPSIG00000017307	CNOT6	95	86.047	ENSGMOG00000009767	cnot6b	96	86.047	Gadus_morhua
ENSPSIG00000017307	CNOT6	100	98.529	ENSGALG00000034316	CNOT6	98	98.529	Gallus_gallus
ENSPSIG00000017307	CNOT6	100	86.239	ENSGAFG00000008525	cnot6b	98	85.872	Gambusia_affinis
ENSPSIG00000017307	CNOT6	95	84.109	ENSGACG00000018046	cnot6b	96	84.109	Gasterosteus_aculeatus
ENSPSIG00000017307	CNOT6	100	82.537	ENSGAGG00000012176	CNOT6	97	82.537	Gopherus_agassizii
ENSPSIG00000017307	CNOT6	100	95.588	ENSGGOG00000003675	CNOT6	98	95.588	Gorilla_gorilla
ENSPSIG00000017307	CNOT6	100	85.897	ENSHBUG00000002819	cnot6b	98	86.447	Haplochromis_burtoni
ENSPSIG00000017307	CNOT6	100	94.118	ENSHGLG00000017756	CNOT6	98	94.118	Heterocephalus_glaber_female
ENSPSIG00000017307	CNOT6	100	94.118	ENSHGLG00100005747	CNOT6	98	94.118	Heterocephalus_glaber_male
ENSPSIG00000017307	CNOT6	100	84.432	ENSHCOG00000016176	cnot6b	98	84.982	Hippocampus_comes
ENSPSIG00000017307	CNOT6	100	86.789	ENSIPUG00000019831	cnot6a	98	86.789	Ictalurus_punctatus
ENSPSIG00000017307	CNOT6	100	85.321	ENSIPUG00000017482	cnot6b	98	85.321	Ictalurus_punctatus
ENSPSIG00000017307	CNOT6	100	96.140	ENSSTOG00000002803	CNOT6	98	96.140	Ictidomys_tridecemlineatus
ENSPSIG00000017307	CNOT6	100	94.301	ENSJJAG00000012296	Cnot6	98	94.301	Jaculus_jaculus
ENSPSIG00000017307	CNOT6	100	87.156	ENSKMAG00000004640	cnot6b	98	86.789	Kryptolebias_marmoratus
ENSPSIG00000017307	CNOT6	100	84.799	ENSLBEG00000027917	cnot6b	98	85.348	Labrus_bergylta
ENSPSIG00000017307	CNOT6	100	91.376	ENSLOCG00000010102	cnot6b	97	91.376	Lepisosteus_oculatus
ENSPSIG00000017307	CNOT6	100	96.507	ENSLAFG00000016742	CNOT6	98	96.507	Loxodonta_africana
ENSPSIG00000017307	CNOT6	100	95.772	ENSMFAG00000030867	CNOT6	98	95.772	Macaca_fascicularis
ENSPSIG00000017307	CNOT6	100	95.772	ENSMMUG00000018690	CNOT6	98	95.772	Macaca_mulatta
ENSPSIG00000017307	CNOT6	100	95.772	ENSMNEG00000038565	CNOT6	98	95.772	Macaca_nemestrina
ENSPSIG00000017307	CNOT6	100	95.772	ENSMLEG00000010555	CNOT6	98	95.772	Mandrillus_leucophaeus
ENSPSIG00000017307	CNOT6	100	88.095	ENSMAMG00000007515	cnot6b	98	87.729	Mastacembelus_armatus
ENSPSIG00000017307	CNOT6	100	85.714	ENSMZEG00005012899	cnot6b	98	86.264	Maylandia_zebra
ENSPSIG00000017307	CNOT6	100	94.853	ENSMAUG00000019798	Cnot6	98	94.853	Mesocricetus_auratus
ENSPSIG00000017307	CNOT6	100	94.118	ENSMICG00000013018	-	98	94.118	Microcebus_murinus
ENSPSIG00000017307	CNOT6	100	85.662	ENSMICG00000028378	-	99	85.662	Microcebus_murinus
ENSPSIG00000017307	CNOT6	100	94.669	ENSMOCG00000021662	Cnot6	98	94.669	Microtus_ochrogaster
ENSPSIG00000017307	CNOT6	100	84.771	ENSMMOG00000003227	cnot6b	98	84.771	Mola_mola
ENSPSIG00000017307	CNOT6	100	96.691	ENSMODG00000003979	CNOT6	98	96.691	Monodelphis_domestica
ENSPSIG00000017307	CNOT6	100	87.729	ENSMALG00000014251	cnot6b	98	87.363	Monopterus_albus
ENSPSIG00000017307	CNOT6	100	94.853	MGP_CAROLIEiJ_G0016277	Cnot6	98	94.853	Mus_caroli
ENSPSIG00000017307	CNOT6	100	94.853	ENSMUSG00000020362	Cnot6	98	94.853	Mus_musculus
ENSPSIG00000017307	CNOT6	100	94.853	MGP_PahariEiJ_G0017413	Cnot6	98	94.853	Mus_pahari
ENSPSIG00000017307	CNOT6	100	94.669	MGP_SPRETEiJ_G0017122	Cnot6	98	94.669	Mus_spretus
ENSPSIG00000017307	CNOT6	100	96.507	ENSMPUG00000000587	CNOT6	94	96.507	Mustela_putorius_furo
ENSPSIG00000017307	CNOT6	100	94.171	ENSMLUG00000010257	CNOT6	98	94.171	Myotis_lucifugus
ENSPSIG00000017307	CNOT6	100	93.566	ENSNGAG00000008269	Cnot6	98	93.566	Nannospalax_galili
ENSPSIG00000017307	CNOT6	100	85.897	ENSNBRG00000010798	cnot6b	98	86.447	Neolamprologus_brichardi
ENSPSIG00000017307	CNOT6	100	94.301	ENSNLEG00000002322	CNOT6	98	94.301	Nomascus_leucogenys
ENSPSIG00000017307	CNOT6	81	96.729	ENSMEUG00000000025	CNOT6	79	96.729	Notamacropus_eugenii
ENSPSIG00000017307	CNOT6	88	94.828	ENSOPRG00000008244	-	86	94.828	Ochotona_princeps
ENSPSIG00000017307	CNOT6	100	93.015	ENSODEG00000007041	CNOT6	98	93.015	Octodon_degus
ENSPSIG00000017307	CNOT6	75	86.341	ENSONIG00000013027	cnot6b	96	86.341	Oreochromis_niloticus
ENSPSIG00000017307	CNOT6	100	95.772	ENSOANG00000010226	CNOT6	98	95.772	Ornithorhynchus_anatinus
ENSPSIG00000017307	CNOT6	100	94.689	ENSOCUG00000011083	CNOT6	98	94.689	Oryctolagus_cuniculus
ENSPSIG00000017307	CNOT6	100	85.897	ENSORLG00000005059	cnot6b	98	85.531	Oryzias_latipes
ENSPSIG00000017307	CNOT6	100	85.897	ENSORLG00020012784	cnot6b	98	85.531	Oryzias_latipes_hni
ENSPSIG00000017307	CNOT6	96	85.277	ENSORLG00015022658	cnot6b	98	84.895	Oryzias_latipes_hsok
ENSPSIG00000017307	CNOT6	100	86.447	ENSOMEG00000005295	cnot6b	98	86.081	Oryzias_melastigma
ENSPSIG00000017307	CNOT6	96	95.802	ENSOGAG00000032470	CNOT6	100	95.802	Otolemur_garnettii
ENSPSIG00000017307	CNOT6	99	95.387	ENSOARG00000001003	CNOT6	100	95.387	Ovis_aries
ENSPSIG00000017307	CNOT6	100	95.588	ENSPPAG00000032253	CNOT6	98	95.588	Pan_paniscus
ENSPSIG00000017307	CNOT6	100	96.324	ENSPPRG00000011912	CNOT6	98	96.324	Panthera_pardus
ENSPSIG00000017307	CNOT6	100	96.324	ENSPTIG00000016794	CNOT6	98	96.324	Panthera_tigris_altaica
ENSPSIG00000017307	CNOT6	100	95.588	ENSPTRG00000017636	CNOT6	98	95.588	Pan_troglodytes
ENSPSIG00000017307	CNOT6	100	95.772	ENSPANG00000016191	CNOT6	98	95.772	Papio_anubis
ENSPSIG00000017307	CNOT6	100	88.257	ENSPKIG00000021368	cnot6b	98	88.257	Paramormyrops_kingsleyae
ENSPSIG00000017307	CNOT6	100	86.630	ENSPMGG00000011238	cnot6b	98	86.264	Periophthalmus_magnuspinnatus
ENSPSIG00000017307	CNOT6	100	93.750	ENSPEMG00000000627	Cnot6	98	93.750	Peromyscus_maniculatus_bairdii
ENSPSIG00000017307	CNOT6	100	96.691	ENSPCIG00000020319	CNOT6	97	96.691	Phascolarctos_cinereus
ENSPSIG00000017307	CNOT6	100	86.422	ENSPFOG00000006291	cnot6b	98	86.055	Poecilia_formosa
ENSPSIG00000017307	CNOT6	100	82.752	ENSPLAG00000008266	cnot6b	98	82.385	Poecilia_latipinna
ENSPSIG00000017307	CNOT6	100	86.606	ENSPMEG00000009091	cnot6b	98	86.239	Poecilia_mexicana
ENSPSIG00000017307	CNOT6	100	85.505	ENSPREG00000003713	cnot6b	98	85.138	Poecilia_reticulata
ENSPSIG00000017307	CNOT6	100	95.588	ENSPPYG00000016137	CNOT6	98	95.588	Pongo_abelii
ENSPSIG00000017307	CNOT6	70	93.985	ENSPCAG00000005599	-	68	93.985	Procavia_capensis
ENSPSIG00000017307	CNOT6	100	90.257	ENSPCOG00000017359	CNOT6	98	90.993	Propithecus_coquereli
ENSPSIG00000017307	CNOT6	100	91.176	ENSPVAG00000003069	CNOT6	98	91.176	Pteropus_vampyrus
ENSPSIG00000017307	CNOT6	100	85.531	ENSPNYG00000000321	cnot6b	98	86.081	Pundamilia_nyererei
ENSPSIG00000017307	CNOT6	100	87.523	ENSPNAG00000029586	cnot6a	98	87.523	Pygocentrus_nattereri
ENSPSIG00000017307	CNOT6	100	86.606	ENSPNAG00000028816	cnot6b	98	86.606	Pygocentrus_nattereri
ENSPSIG00000017307	CNOT6	100	93.750	ENSRNOG00000054891	Cnot6	98	93.750	Rattus_norvegicus
ENSPSIG00000017307	CNOT6	100	95.588	ENSRBIG00000004309	CNOT6	98	95.588	Rhinopithecus_bieti
ENSPSIG00000017307	CNOT6	100	95.588	ENSRROG00000035378	CNOT6	100	95.238	Rhinopithecus_roxellana
ENSPSIG00000017307	CNOT6	100	95.772	ENSSBOG00000030494	CNOT6	98	95.772	Saimiri_boliviensis_boliviensis
ENSPSIG00000017307	CNOT6	100	96.875	ENSSHAG00000017436	CNOT6	98	96.875	Sarcophilus_harrisii
ENSPSIG00000017307	CNOT6	100	89.541	ENSSFOG00015015133	CNOT6	98	89.541	Scleropages_formosus
ENSPSIG00000017307	CNOT6	100	87.339	ENSSFOG00015022383	cnot6a	93	87.339	Scleropages_formosus
ENSPSIG00000017307	CNOT6	100	85.714	ENSSMAG00000003084	cnot6b	98	85.348	Scophthalmus_maximus
ENSPSIG00000017307	CNOT6	100	87.546	ENSSDUG00000004151	cnot6b	98	87.179	Seriola_dumerili
ENSPSIG00000017307	CNOT6	100	86.630	ENSSLDG00000004448	cnot6b	98	87.179	Seriola_lalandi_dorsalis
ENSPSIG00000017307	CNOT6	66	76.816	ENSSARG00000012650	-	100	76.816	Sorex_araneus
ENSPSIG00000017307	CNOT6	100	97.610	ENSSPUG00000007893	CNOT6	98	97.610	Sphenodon_punctatus
ENSPSIG00000017307	CNOT6	100	87.729	ENSSPAG00000000149	cnot6b	98	87.363	Stegastes_partitus
ENSPSIG00000017307	CNOT6	100	95.588	ENSSSCG00000014009	CNOT6	100	95.455	Sus_scrofa
ENSPSIG00000017307	CNOT6	100	98.346	ENSTGUG00000001119	CNOT6	98	98.346	Taeniopygia_guttata
ENSPSIG00000017307	CNOT6	100	84.743	ENSTRUG00000002818	cnot6b	98	84.743	Takifugu_rubripes
ENSPSIG00000017307	CNOT6	100	85.110	ENSTNIG00000004443	cnot6b	96	85.110	Tetraodon_nigroviridis
ENSPSIG00000017307	CNOT6	87	65.612	ENSTBEG00000017094	-	97	65.612	Tupaia_belangeri
ENSPSIG00000017307	CNOT6	100	95.772	ENSTTRG00000009363	CNOT6	98	95.772	Tursiops_truncatus
ENSPSIG00000017307	CNOT6	79	96.037	ENSUAMG00000004579	CNOT6	88	96.037	Ursus_americanus
ENSPSIG00000017307	CNOT6	100	91.944	ENSUMAG00000024577	CNOT6	98	91.944	Ursus_maritimus
ENSPSIG00000017307	CNOT6	83	93.692	ENSVPAG00000003593	CNOT6	81	93.692	Vicugna_pacos
ENSPSIG00000017307	CNOT6	100	96.691	ENSVVUG00000026940	CNOT6	98	96.691	Vulpes_vulpes
ENSPSIG00000017307	CNOT6	100	83.119	ENSXCOG00000003360	cnot6b	98	82.752	Xiphophorus_couchianus
ENSPSIG00000017307	CNOT6	100	86.606	ENSXMAG00000008730	cnot6b	98	86.239	Xiphophorus_maculatus