EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000017356 (Gene tree)
Gene ID: 102454660
Gene Symbol: TRNT1
Alias: -
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 10187 bases
Position: chrJH211518.1:144100-154286
Accession: 102454660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000019574	PolyA_pol	PF01743.20	9.7e-35	1	1
ENSPSIP00000019579	PolyA_pol	PF01743.20	2.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000019665	TRNT1-201	1191	-	ENSPSIP00000019574	397 (aa)	-	K7GH13
ENSPSIT00000019670	TRNT1-202	4471	XM_006132860	ENSPSIP00000019579	361 (aa)	XP_006132922	K7GH18

Gene Model

Click here to download ENSPSIG00000017356's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000017356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000017356	TRNT1	99	83.056	ENSG00000072756	TRNT1	91	81.360	Homo_sapiens
ENSPSIG00000017356	TRNT1	99	70.112	ENSAPOG00000013687	trnt1	90	70.312	Acanthochromis_polyacanthus
ENSPSIG00000017356	TRNT1	99	80.939	ENSAMEG00000014520	TRNT1	92	79.198	Ailuropoda_melanoleuca
ENSPSIG00000017356	TRNT1	99	70.474	ENSACIG00000021706	trnt1	93	69.620	Amphilophus_citrinellus
ENSPSIG00000017356	TRNT1	99	70.195	ENSAOCG00000024612	trnt1	90	70.649	Amphiprion_ocellaris
ENSPSIG00000017356	TRNT1	96	62.717	ENSAPEG00000022627	trnt1	87	62.865	Amphiprion_percula
ENSPSIG00000017356	TRNT1	99	70.833	ENSATEG00000008928	trnt1	98	70.633	Anabas_testudineus
ENSPSIG00000017356	TRNT1	99	83.056	ENSAPLG00000004258	TRNT1	96	83.033	Anas_platyrhynchos
ENSPSIG00000017356	TRNT1	99	84.444	ENSACAG00000005657	TRNT1	86	84.574	Anolis_carolinensis
ENSPSIG00000017356	TRNT1	99	81.944	ENSANAG00000024802	TRNT1	91	80.353	Aotus_nancymaae
ENSPSIG00000017356	TRNT1	99	69.167	ENSACLG00000022227	trnt1	93	68.608	Astatotilapia_calliptera
ENSPSIG00000017356	TRNT1	99	69.832	ENSAMXG00000003960	trnt1	92	68.514	Astyanax_mexicanus
ENSPSIG00000017356	TRNT1	99	80.556	ENSBTAG00000019534	TRNT1	91	79.093	Bos_taurus
ENSPSIG00000017356	TRNT1	100	44.794	WBGene00010089	hpo-31	92	44.794	Caenorhabditis_elegans
ENSPSIG00000017356	TRNT1	99	82.222	ENSCJAG00000015466	TRNT1	91	80.605	Callithrix_jacchus
ENSPSIG00000017356	TRNT1	99	81.667	ENSCAFG00000005985	TRNT1	91	79.849	Canis_familiaris
ENSPSIG00000017356	TRNT1	99	81.667	ENSCAFG00020014746	TRNT1	91	79.849	Canis_lupus_dingo
ENSPSIG00000017356	TRNT1	99	80.556	ENSCHIG00000007030	TRNT1	91	79.345	Capra_hircus
ENSPSIG00000017356	TRNT1	99	82.173	ENSTSYG00000013390	TRNT1	91	80.353	Carlito_syrichta
ENSPSIG00000017356	TRNT1	93	70.448	ENSCAPG00000006891	TRNT1	99	65.517	Cavia_aperea
ENSPSIG00000017356	TRNT1	99	81.111	ENSCPOG00000007849	TRNT1	91	79.293	Cavia_porcellus
ENSPSIG00000017356	TRNT1	99	82.500	ENSCCAG00000002919	TRNT1	98	81.108	Cebus_capucinus
ENSPSIG00000017356	TRNT1	99	83.333	ENSCATG00000031985	TRNT1	90	81.313	Cercocebus_atys
ENSPSIG00000017356	TRNT1	99	81.944	ENSCLAG00000005186	TRNT1	91	80.303	Chinchilla_lanigera
ENSPSIG00000017356	TRNT1	99	83.333	ENSCSAG00000011052	TRNT1	91	81.612	Chlorocebus_sabaeus
ENSPSIG00000017356	TRNT1	81	88.462	ENSCHOG00000005712	TRNT1	76	82.424	Choloepus_hoffmanni
ENSPSIG00000017356	TRNT1	99	94.429	ENSCPBG00000017636	TRNT1	91	91.688	Chrysemys_picta_bellii
ENSPSIG00000017356	TRNT1	99	44.836	ENSCING00000007069	-	97	44.836	Ciona_intestinalis
ENSPSIG00000017356	TRNT1	99	44.221	ENSCSAVG00000007494	-	94	44.221	Ciona_savignyi
ENSPSIG00000017356	TRNT1	99	83.333	ENSCANG00000039030	TRNT1	91	81.612	Colobus_angolensis_palliatus
ENSPSIG00000017356	TRNT1	99	81.944	ENSCGRG00001009998	Trnt1	91	80.353	Cricetulus_griseus_chok1gshd
ENSPSIG00000017356	TRNT1	99	81.944	ENSCGRG00000013410	Trnt1	91	80.353	Cricetulus_griseus_crigri
ENSPSIG00000017356	TRNT1	99	69.167	ENSCSEG00000008157	trnt1	96	68.782	Cynoglossus_semilaevis
ENSPSIG00000017356	TRNT1	99	70.752	ENSCVAG00000019770	trnt1	93	69.620	Cyprinodon_variegatus
ENSPSIG00000017356	TRNT1	99	70.950	ENSDARG00000075297	trnt1	92	69.270	Danio_rerio
ENSPSIG00000017356	TRNT1	99	83.056	ENSDNOG00000008837	TRNT1	91	80.856	Dasypus_novemcinctus
ENSPSIG00000017356	TRNT1	99	81.667	ENSDORG00000014035	Trnt1	91	80.101	Dipodomys_ordii
ENSPSIG00000017356	TRNT1	99	49.246	FBgn0037369	CG2100	82	49.246	Drosophila_melanogaster
ENSPSIG00000017356	TRNT1	58	81.304	ENSETEG00000018177	TRNT1	92	81.304	Echinops_telfairi
ENSPSIG00000017356	TRNT1	99	66.760	ENSEBUG00000012779	-	93	65.909	Eptatretus_burgeri
ENSPSIG00000017356	TRNT1	99	82.500	ENSEASG00005003577	TRNT1	91	80.856	Equus_asinus_asinus
ENSPSIG00000017356	TRNT1	99	82.778	ENSECAG00000014420	TRNT1	91	81.108	Equus_caballus
ENSPSIG00000017356	TRNT1	99	80.000	ENSEEUG00000009567	TRNT1	91	78.338	Erinaceus_europaeus
ENSPSIG00000017356	TRNT1	99	70.950	ENSELUG00000003802	trnt1	92	69.018	Esox_lucius
ENSPSIG00000017356	TRNT1	99	81.667	ENSFCAG00000026805	TRNT1	91	79.849	Felis_catus
ENSPSIG00000017356	TRNT1	99	80.833	ENSFALG00000013539	TRNT1	99	81.510	Ficedula_albicollis
ENSPSIG00000017356	TRNT1	99	81.389	ENSFDAG00000018412	TRNT1	91	79.545	Fukomys_damarensis
ENSPSIG00000017356	TRNT1	99	70.474	ENSFHEG00000019294	trnt1	93	69.367	Fundulus_heteroclitus
ENSPSIG00000017356	TRNT1	99	69.274	ENSGMOG00000007460	trnt1	89	70.079	Gadus_morhua
ENSPSIG00000017356	TRNT1	99	81.111	ENSGALG00000017368	TRNT1	92	79.597	Gallus_gallus
ENSPSIG00000017356	TRNT1	99	71.667	ENSGAFG00000008647	trnt1	93	71.392	Gambusia_affinis
ENSPSIG00000017356	TRNT1	99	69.359	ENSGACG00000011903	trnt1	96	69.895	Gasterosteus_aculeatus
ENSPSIG00000017356	TRNT1	99	95.556	ENSGAGG00000020942	TRNT1	90	92.947	Gopherus_agassizii
ENSPSIG00000017356	TRNT1	99	83.056	ENSGGOG00000015286	TRNT1	91	81.360	Gorilla_gorilla
ENSPSIG00000017356	TRNT1	99	69.167	ENSHBUG00000002797	trnt1	93	68.608	Haplochromis_burtoni
ENSPSIG00000017356	TRNT1	99	81.389	ENSHGLG00000003649	TRNT1	91	79.798	Heterocephalus_glaber_female
ENSPSIG00000017356	TRNT1	99	75.900	ENSHGLG00000000221	-	89	76.486	Heterocephalus_glaber_female
ENSPSIG00000017356	TRNT1	99	80.000	ENSHGLG00100016421	TRNT1	91	78.535	Heterocephalus_glaber_male
ENSPSIG00000017356	TRNT1	99	68.245	ENSHCOG00000010618	trnt1	93	67.595	Hippocampus_comes
ENSPSIG00000017356	TRNT1	99	70.391	ENSIPUG00000000971	trnt1	92	68.766	Ictalurus_punctatus
ENSPSIG00000017356	TRNT1	99	80.000	ENSSTOG00000000150	TRNT1	91	78.589	Ictidomys_tridecemlineatus
ENSPSIG00000017356	TRNT1	99	81.111	ENSJJAG00000018561	Trnt1	91	79.597	Jaculus_jaculus
ENSPSIG00000017356	TRNT1	99	70.000	ENSKMAG00000011307	trnt1	93	69.114	Kryptolebias_marmoratus
ENSPSIG00000017356	TRNT1	96	65.000	ENSLBEG00000019457	trnt1	89	65.000	Labrus_bergylta
ENSPSIG00000017356	TRNT1	99	76.257	ENSLACG00000013227	TRNT1	91	73.804	Latimeria_chalumnae
ENSPSIG00000017356	TRNT1	99	74.095	ENSLOCG00000011105	trnt1	91	73.232	Lepisosteus_oculatus
ENSPSIG00000017356	TRNT1	99	83.056	ENSLAFG00000023191	TRNT1	91	81.108	Loxodonta_africana
ENSPSIG00000017356	TRNT1	99	83.333	ENSMFAG00000045113	TRNT1	90	81.313	Macaca_fascicularis
ENSPSIG00000017356	TRNT1	99	83.333	ENSMMUG00000017983	TRNT1	90	81.313	Macaca_mulatta
ENSPSIG00000017356	TRNT1	99	83.333	ENSMNEG00000037805	TRNT1	90	81.313	Macaca_nemestrina
ENSPSIG00000017356	TRNT1	100	83.102	ENSMLEG00000033671	TRNT1	99	83.246	Mandrillus_leucophaeus
ENSPSIG00000017356	TRNT1	99	69.916	ENSMAMG00000023401	trnt1	93	68.608	Mastacembelus_armatus
ENSPSIG00000017356	TRNT1	99	69.167	ENSMZEG00005009141	trnt1	93	68.608	Maylandia_zebra
ENSPSIG00000017356	TRNT1	88	82.132	ENSMGAG00000009971	TRNT1	100	81.931	Meleagris_gallopavo
ENSPSIG00000017356	TRNT1	99	81.944	ENSMAUG00000020707	Trnt1	91	80.353	Mesocricetus_auratus
ENSPSIG00000017356	TRNT1	99	82.778	ENSMICG00000016615	TRNT1	91	80.856	Microcebus_murinus
ENSPSIG00000017356	TRNT1	99	82.222	ENSMOCG00000004539	Trnt1	91	80.605	Microtus_ochrogaster
ENSPSIG00000017356	TRNT1	99	69.722	ENSMMOG00000010742	trnt1	93	68.861	Mola_mola
ENSPSIG00000017356	TRNT1	99	82.451	ENSMODG00000004368	TRNT1	91	80.856	Monodelphis_domestica
ENSPSIG00000017356	TRNT1	99	68.245	ENSMALG00000008376	trnt1	92	67.595	Monopterus_albus
ENSPSIG00000017356	TRNT1	99	81.667	MGP_CAROLIEiJ_G0028698	Trnt1	91	80.101	Mus_caroli
ENSPSIG00000017356	TRNT1	99	81.667	ENSMUSG00000013736	Trnt1	91	80.101	Mus_musculus
ENSPSIG00000017356	TRNT1	99	81.944	MGP_PahariEiJ_G0022449	Trnt1	91	80.353	Mus_pahari
ENSPSIG00000017356	TRNT1	99	81.944	MGP_SPRETEiJ_G0029726	Trnt1	91	80.353	Mus_spretus
ENSPSIG00000017356	TRNT1	99	81.389	ENSMPUG00000017017	TRNT1	91	79.597	Mustela_putorius_furo
ENSPSIG00000017356	TRNT1	99	79.444	ENSMLUG00000011864	TRNT1	99	79.740	Myotis_lucifugus
ENSPSIG00000017356	TRNT1	99	81.111	ENSNGAG00000000537	Trnt1	91	79.345	Nannospalax_galili
ENSPSIG00000017356	TRNT1	79	66.984	ENSNBRG00000023606	trnt1	91	66.984	Neolamprologus_brichardi
ENSPSIG00000017356	TRNT1	99	83.333	ENSNLEG00000003226	TRNT1	91	81.612	Nomascus_leucogenys
ENSPSIG00000017356	TRNT1	99	81.337	ENSMEUG00000004684	TRNT1	91	79.849	Notamacropus_eugenii
ENSPSIG00000017356	TRNT1	99	73.056	ENSOPRG00000015067	TRNT1	99	73.368	Ochotona_princeps
ENSPSIG00000017356	TRNT1	99	81.944	ENSODEG00000007597	TRNT1	91	80.303	Octodon_degus
ENSPSIG00000017356	TRNT1	99	69.638	ENSONIG00000020273	trnt1	91	68.861	Oreochromis_niloticus
ENSPSIG00000017356	TRNT1	99	77.374	ENSOANG00000007514	TRNT1	91	75.190	Ornithorhynchus_anatinus
ENSPSIG00000017356	TRNT1	99	77.222	ENSOCUG00000008580	TRNT1	92	75.819	Oryctolagus_cuniculus
ENSPSIG00000017356	TRNT1	99	69.167	ENSORLG00000003165	trnt1	93	68.861	Oryzias_latipes
ENSPSIG00000017356	TRNT1	99	69.444	ENSORLG00020022060	trnt1	93	69.114	Oryzias_latipes_hni
ENSPSIG00000017356	TRNT1	99	68.611	ENSORLG00015018915	trnt1	93	68.354	Oryzias_latipes_hsok
ENSPSIG00000017356	TRNT1	99	67.222	ENSOMEG00000003331	trnt1	93	67.089	Oryzias_melastigma
ENSPSIG00000017356	TRNT1	99	80.556	ENSOARG00000008631	TRNT1	91	79.345	Ovis_aries
ENSPSIG00000017356	TRNT1	99	83.056	ENSPPAG00000043566	TRNT1	91	81.360	Pan_paniscus
ENSPSIG00000017356	TRNT1	99	81.389	ENSPPRG00000001327	TRNT1	91	79.798	Panthera_pardus
ENSPSIG00000017356	TRNT1	99	81.389	ENSPTIG00000011448	TRNT1	91	79.597	Panthera_tigris_altaica
ENSPSIG00000017356	TRNT1	99	83.056	ENSPTRG00000014564	TRNT1	91	81.360	Pan_troglodytes
ENSPSIG00000017356	TRNT1	99	83.333	ENSPANG00000025944	TRNT1	90	81.313	Papio_anubis
ENSPSIG00000017356	TRNT1	99	72.981	ENSPKIG00000020015	trnt1	92	70.781	Paramormyrops_kingsleyae
ENSPSIG00000017356	TRNT1	99	70.195	ENSPMGG00000008888	trnt1	91	69.367	Periophthalmus_magnuspinnatus
ENSPSIG00000017356	TRNT1	99	81.667	ENSPEMG00000019845	Trnt1	91	80.101	Peromyscus_maniculatus_bairdii
ENSPSIG00000017356	TRNT1	99	82.173	ENSPCIG00000030436	TRNT1	91	80.605	Phascolarctos_cinereus
ENSPSIG00000017356	TRNT1	99	71.389	ENSPFOG00000006194	trnt1	93	71.139	Poecilia_formosa
ENSPSIG00000017356	TRNT1	99	71.389	ENSPLAG00000015623	trnt1	98	71.139	Poecilia_latipinna
ENSPSIG00000017356	TRNT1	99	71.111	ENSPMEG00000012216	trnt1	98	70.886	Poecilia_mexicana
ENSPSIG00000017356	TRNT1	99	71.667	ENSPREG00000021470	trnt1	93	70.886	Poecilia_reticulata
ENSPSIG00000017356	TRNT1	99	83.333	ENSPPYG00000013702	TRNT1	91	81.612	Pongo_abelii
ENSPSIG00000017356	TRNT1	99	82.222	ENSPCAG00000001951	TRNT1	100	82.245	Procavia_capensis
ENSPSIG00000017356	TRNT1	99	82.500	ENSPCOG00000022228	TRNT1	91	80.605	Propithecus_coquereli
ENSPSIG00000017356	TRNT1	99	80.000	ENSPVAG00000008784	TRNT1	100	80.208	Pteropus_vampyrus
ENSPSIG00000017356	TRNT1	99	69.167	ENSPNYG00000003120	trnt1	93	68.608	Pundamilia_nyererei
ENSPSIG00000017356	TRNT1	99	68.994	ENSPNAG00000000565	trnt1	92	67.506	Pygocentrus_nattereri
ENSPSIG00000017356	TRNT1	99	82.222	ENSRNOG00000006432	Trnt1	91	80.605	Rattus_norvegicus
ENSPSIG00000017356	TRNT1	99	81.667	ENSRBIG00000042632	TRNT1	91	80.101	Rhinopithecus_bieti
ENSPSIG00000017356	TRNT1	99	82.778	ENSRROG00000036866	TRNT1	91	81.108	Rhinopithecus_roxellana
ENSPSIG00000017356	TRNT1	99	81.944	ENSSBOG00000021208	TRNT1	91	80.353	Saimiri_boliviensis_boliviensis
ENSPSIG00000017356	TRNT1	99	82.173	ENSSHAG00000018861	TRNT1	91	80.605	Sarcophilus_harrisii
ENSPSIG00000017356	TRNT1	99	72.346	ENSSFOG00015020844	trnt1	91	71.066	Scleropages_formosus
ENSPSIG00000017356	TRNT1	99	70.474	ENSSMAG00000015432	trnt1	91	69.620	Scophthalmus_maximus
ENSPSIG00000017356	TRNT1	99	69.081	ENSSDUG00000012320	trnt1	93	68.354	Seriola_dumerili
ENSPSIG00000017356	TRNT1	99	69.081	ENSSLDG00000009325	trnt1	93	68.354	Seriola_lalandi_dorsalis
ENSPSIG00000017356	TRNT1	70	62.451	ENSSLDG00000016463	-	96	62.451	Seriola_lalandi_dorsalis
ENSPSIG00000017356	TRNT1	99	86.667	ENSSPUG00000014153	TRNT1	100	86.979	Sphenodon_punctatus
ENSPSIG00000017356	TRNT1	99	68.524	ENSSPAG00000021005	trnt1	93	67.595	Stegastes_partitus
ENSPSIG00000017356	TRNT1	99	81.111	ENSSSCG00000011529	TRNT1	91	79.949	Sus_scrofa
ENSPSIG00000017356	TRNT1	99	81.564	ENSTGUG00000010192	TRNT1	98	79.798	Taeniopygia_guttata
ENSPSIG00000017356	TRNT1	99	69.359	ENSTRUG00000001088	trnt1	93	68.608	Takifugu_rubripes
ENSPSIG00000017356	TRNT1	99	68.333	ENSTNIG00000007363	trnt1	91	67.848	Tetraodon_nigroviridis
ENSPSIG00000017356	TRNT1	75	62.162	ENSTBEG00000006367	TRNT1	88	62.162	Tupaia_belangeri
ENSPSIG00000017356	TRNT1	99	80.000	ENSTTRG00000007803	TRNT1	91	78.841	Tursiops_truncatus
ENSPSIG00000017356	TRNT1	99	82.222	ENSUAMG00000022574	TRNT1	91	80.353	Ursus_americanus
ENSPSIG00000017356	TRNT1	99	81.944	ENSUMAG00000024092	TRNT1	91	80.101	Ursus_maritimus
ENSPSIG00000017356	TRNT1	99	81.667	ENSVVUG00000012810	TRNT1	91	79.849	Vulpes_vulpes
ENSPSIG00000017356	TRNT1	99	67.877	ENSXETG00000025091	trnt1	95	68.063	Xenopus_tropicalis
ENSPSIG00000017356	TRNT1	99	70.833	ENSXCOG00000010150	trnt1	93	70.633	Xiphophorus_couchianus
ENSPSIG00000017356	TRNT1	99	71.111	ENSXMAG00000002227	trnt1	93	70.886	Xiphophorus_maculatus