EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000017516 (Gene tree)
Gene ID: 102454479
Gene Symbol: RBM47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 7296 bases
Position: chrJH210475.1:645670-652965
Accession: 30358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000019742	RRM_1	PF00076.22	4e-40	1	3
ENSPSIP00000019742	RRM_1	PF00076.22	4e-40	2	3
ENSPSIP00000019742	RRM_1	PF00076.22	4e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000019835	RBM47-201	1663	-	ENSPSIP00000019742	543 (aa)	-	K7GHI1

Gene Model

Click here to download ENSPSIG00000017516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000017516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000017516	RBM47	57	53.871	ENSPSIG00000012306	SYNCRIP	70	48.964
ENSPSIG00000017516	RBM47	58	72.063	ENSPSIG00000006429	RBM46	64	72.063
ENSPSIG00000017516	RBM47	79	58.969	ENSPSIG00000010318	A1CF	75	58.969
ENSPSIG00000017516	RBM47	59	54.969	ENSPSIG00000002993	HNRNPR	63	49.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000017516	RBM47	97	90.226	ENSG00000163694	RBM47	100	93.088	Homo_sapiens
ENSPSIG00000017516	RBM47	97	81.238	ENSAPOG00000011062	rbm47	88	82.653	Acanthochromis_polyacanthus
ENSPSIG00000017516	RBM47	97	90.449	ENSAMEG00000009672	RBM47	90	90.824	Ailuropoda_melanoleuca
ENSPSIG00000017516	RBM47	97	80.791	ENSACIG00000011531	rbm47	89	80.791	Amphilophus_citrinellus
ENSPSIG00000017516	RBM47	97	81.544	ENSAOCG00000022245	rbm47	88	82.653	Amphiprion_ocellaris
ENSPSIG00000017516	RBM47	97	81.544	ENSAPEG00000018304	rbm47	88	82.653	Amphiprion_percula
ENSPSIG00000017516	RBM47	97	79.006	ENSATEG00000018400	rbm47	89	78.821	Anabas_testudineus
ENSPSIG00000017516	RBM47	97	94.340	ENSAPLG00000013974	RBM47	92	94.340	Anas_platyrhynchos
ENSPSIG00000017516	RBM47	97	89.493	ENSACAG00000011833	RBM47	89	89.869	Anolis_carolinensis
ENSPSIG00000017516	RBM47	97	90.789	ENSANAG00000029440	RBM47	95	92.553	Aotus_nancymaae
ENSPSIG00000017516	RBM47	97	79.779	ENSACLG00000016902	rbm47	88	84.278	Astatotilapia_calliptera
ENSPSIG00000017516	RBM47	93	82.353	ENSAMXG00000021794	rbm47	89	79.374	Astyanax_mexicanus
ENSPSIG00000017516	RBM47	97	91.856	ENSBTAG00000002356	RBM47	89	91.856	Bos_taurus
ENSPSIG00000017516	RBM47	97	90.720	ENSCJAG00000019385	RBM47	95	92.287	Callithrix_jacchus
ENSPSIG00000017516	RBM47	93	90.138	ENSCAFG00000015898	RBM47	90	88.324	Canis_familiaris
ENSPSIG00000017516	RBM47	90	90.631	ENSCAFG00020010558	RBM47	94	88.889	Canis_lupus_dingo
ENSPSIG00000017516	RBM47	97	91.856	ENSCHIG00000026214	RBM47	89	91.856	Capra_hircus
ENSPSIG00000017516	RBM47	82	89.238	ENSTSYG00000033612	RBM47	80	88.839	Carlito_syrichta
ENSPSIG00000017516	RBM47	97	83.176	ENSCAPG00000008426	RBM47	89	83.365	Cavia_aperea
ENSPSIG00000017516	RBM47	97	89.981	ENSCPOG00000014100	RBM47	88	92.021	Cavia_porcellus
ENSPSIG00000017516	RBM47	97	63.039	ENSCCAG00000024397	-	90	63.227	Cebus_capucinus
ENSPSIG00000017516	RBM47	97	91.098	ENSCCAG00000030129	-	95	92.819	Cebus_capucinus
ENSPSIG00000017516	RBM47	97	90.530	ENSCATG00000042064	RBM47	95	92.819	Cercocebus_atys
ENSPSIG00000017516	RBM47	97	90.720	ENSCLAG00000001684	RBM47	100	88.608	Chinchilla_lanigera
ENSPSIG00000017516	RBM47	97	90.226	ENSCSAG00000017060	RBM47	89	90.789	Chlorocebus_sabaeus
ENSPSIG00000017516	RBM47	82	84.978	ENSCHOG00000011731	RBM47	75	85.650	Choloepus_hoffmanni
ENSPSIG00000017516	RBM47	97	98.106	ENSCPBG00000013831	RBM47	89	98.106	Chrysemys_picta_bellii
ENSPSIG00000017516	RBM47	97	90.909	ENSCANG00000019997	RBM47	95	92.819	Colobus_angolensis_palliatus
ENSPSIG00000017516	RBM47	97	88.555	ENSCGRG00001000623	-	90	88.743	Cricetulus_griseus_chok1gshd
ENSPSIG00000017516	RBM47	85	86.243	ENSCGRG00001020102	-	88	69.318	Cricetulus_griseus_chok1gshd
ENSPSIG00000017516	RBM47	97	87.617	ENSCGRG00000007762	-	100	88.608	Cricetulus_griseus_crigri
ENSPSIG00000017516	RBM47	85	85.979	ENSCGRG00000014760	-	88	69.129	Cricetulus_griseus_crigri
ENSPSIG00000017516	RBM47	97	77.778	ENSCSEG00000004545	rbm47	89	78.424	Cynoglossus_semilaevis
ENSPSIG00000017516	RBM47	97	80.151	ENSCVAG00000020144	rbm47	88	83.418	Cyprinodon_variegatus
ENSPSIG00000017516	RBM47	93	83.071	ENSDARG00000061985	rbm47	89	80.037	Danio_rerio
ENSPSIG00000017516	RBM47	97	89.962	ENSDNOG00000046854	RBM47	89	90.341	Dasypus_novemcinctus
ENSPSIG00000017516	RBM47	97	89.888	ENSDORG00000010144	Rbm47	89	90.075	Dipodomys_ordii
ENSPSIG00000017516	RBM47	97	89.474	ENSETEG00000009194	RBM47	89	90.414	Echinops_telfairi
ENSPSIG00000017516	RBM47	98	61.524	ENSEBUG00000011912	rbm47	88	62.639	Eptatretus_burgeri
ENSPSIG00000017516	RBM47	97	91.477	ENSEASG00005008443	RBM47	89	91.477	Equus_asinus_asinus
ENSPSIG00000017516	RBM47	97	91.477	ENSECAG00000004400	RBM47	89	91.477	Equus_caballus
ENSPSIG00000017516	RBM47	70	90.909	ENSEEUG00000001194	RBM47	65	90.909	Erinaceus_europaeus
ENSPSIG00000017516	RBM47	97	76.951	ENSELUG00000006148	rbm47	88	82.116	Esox_lucius
ENSPSIG00000017516	RBM47	97	90.720	ENSFCAG00000012399	RBM47	89	90.720	Felis_catus
ENSPSIG00000017516	RBM47	97	94.151	ENSFALG00000002861	RBM47	89	94.340	Ficedula_albicollis
ENSPSIG00000017516	RBM47	97	88.258	ENSFDAG00000016326	RBM47	89	88.447	Fukomys_damarensis
ENSPSIG00000017516	RBM47	97	80.718	ENSFHEG00000007938	rbm47	89	80.529	Fundulus_heteroclitus
ENSPSIG00000017516	RBM47	97	76.951	ENSGMOG00000014802	rbm47	90	77.132	Gadus_morhua
ENSPSIG00000017516	RBM47	69	95.479	ENSGALG00000014267	RBM47	99	95.479	Gallus_gallus
ENSPSIG00000017516	RBM47	69	85.904	ENSGAFG00000020571	rbm47	98	85.904	Gambusia_affinis
ENSPSIG00000017516	RBM47	97	76.881	ENSGACG00000016223	rbm47	87	80.102	Gasterosteus_aculeatus
ENSPSIG00000017516	RBM47	97	98.106	ENSGAGG00000020051	RBM47	89	98.106	Gopherus_agassizii
ENSPSIG00000017516	RBM47	97	90.530	ENSGGOG00000001367	RBM47	95	92.819	Gorilla_gorilla
ENSPSIG00000017516	RBM47	97	79.304	ENSHBUG00000003520	rbm47	88	84.278	Haplochromis_burtoni
ENSPSIG00000017516	RBM47	80	83.333	ENSHGLG00000016914	RBM47	100	89.241	Heterocephalus_glaber_female
ENSPSIG00000017516	RBM47	97	83.523	ENSHGLG00100003071	-	93	83.523	Heterocephalus_glaber_male
ENSPSIG00000017516	RBM47	97	89.583	ENSHGLG00100014028	-	100	89.241	Heterocephalus_glaber_male
ENSPSIG00000017516	RBM47	97	79.661	ENSHCOG00000002074	rbm47	88	82.398	Hippocampus_comes
ENSPSIG00000017516	RBM47	97	80.263	ENSIPUG00000004743	rbm47	89	80.189	Ictalurus_punctatus
ENSPSIG00000017516	RBM47	97	89.662	ENSSTOG00000004727	RBM47	100	88.608	Ictidomys_tridecemlineatus
ENSPSIG00000017516	RBM47	97	88.764	ENSJJAG00000013823	Rbm47	90	89.139	Jaculus_jaculus
ENSPSIG00000017516	RBM47	97	81.356	ENSKMAG00000000084	rbm47	88	82.398	Kryptolebias_marmoratus
ENSPSIG00000017516	RBM47	97	79.096	ENSLBEG00000008436	rbm47	89	79.096	Labrus_bergylta
ENSPSIG00000017516	RBM47	97	88.447	ENSLACG00000007196	RBM47	89	88.636	Latimeria_chalumnae
ENSPSIG00000017516	RBM47	97	86.011	ENSLOCG00000012966	rbm47	85	86.011	Lepisosteus_oculatus
ENSPSIG00000017516	RBM47	97	90.019	ENSLAFG00000011998	RBM47	89	90.395	Loxodonta_africana
ENSPSIG00000017516	RBM47	97	90.530	ENSMFAG00000037967	RBM47	95	92.819	Macaca_fascicularis
ENSPSIG00000017516	RBM47	97	90.226	ENSMMUG00000012036	RBM47	100	92.228	Macaca_mulatta
ENSPSIG00000017516	RBM47	97	90.530	ENSMNEG00000040774	RBM47	95	92.819	Macaca_nemestrina
ENSPSIG00000017516	RBM47	97	94.286	ENSMLEG00000041432	RBM47	97	94.286	Mandrillus_leucophaeus
ENSPSIG00000017516	RBM47	97	78.413	ENSMAMG00000019143	rbm47	89	78.413	Mastacembelus_armatus
ENSPSIG00000017516	RBM47	97	79.779	ENSMZEG00005023659	rbm47	89	79.779	Maylandia_zebra
ENSPSIG00000017516	RBM47	97	94.906	ENSMGAG00000012226	RBM47	89	95.094	Meleagris_gallopavo
ENSPSIG00000017516	RBM47	97	89.286	ENSMAUG00000006493	Rbm47	100	89.241	Mesocricetus_auratus
ENSPSIG00000017516	RBM47	97	84.280	ENSMICG00000026417	RBM47	89	85.227	Microcebus_murinus
ENSPSIG00000017516	RBM47	97	89.454	ENSMOCG00000021170	Rbm47	100	88.608	Microtus_ochrogaster
ENSPSIG00000017516	RBM47	97	78.598	ENSMMOG00000007260	rbm47	89	78.598	Mola_mola
ENSPSIG00000017516	RBM47	97	83.144	ENSMODG00000020561	-	89	83.523	Monodelphis_domestica
ENSPSIG00000017516	RBM47	56	84.244	ENSMODG00000015426	-	97	84.244	Monodelphis_domestica
ENSPSIG00000017516	RBM47	97	92.467	ENSMODG00000007003	RBM47	89	92.655	Monodelphis_domestica
ENSPSIG00000017516	RBM47	97	79.096	ENSMALG00000005167	rbm47	87	83.077	Monopterus_albus
ENSPSIG00000017516	RBM47	97	89.434	MGP_CAROLIEiJ_G0027258	Rbm47	100	89.241	Mus_caroli
ENSPSIG00000017516	RBM47	97	89.623	ENSMUSG00000070780	Rbm47	100	89.241	Mus_musculus
ENSPSIG00000017516	RBM47	97	89.245	MGP_PahariEiJ_G0017040	Rbm47	100	88.608	Mus_pahari
ENSPSIG00000017516	RBM47	97	89.583	MGP_SPRETEiJ_G0028253	Rbm47	100	89.241	Mus_spretus
ENSPSIG00000017516	RBM47	97	90.960	ENSMPUG00000006177	RBM47	84	91.149	Mustela_putorius_furo
ENSPSIG00000017516	RBM47	97	90.170	ENSMLUG00000000889	RBM47	89	90.737	Myotis_lucifugus
ENSPSIG00000017516	RBM47	97	89.286	ENSNGAG00000003325	Rbm47	90	89.474	Nannospalax_galili
ENSPSIG00000017516	RBM47	97	79.633	ENSNBRG00000015092	rbm47	89	79.633	Neolamprologus_brichardi
ENSPSIG00000017516	RBM47	97	90.720	ENSNLEG00000017151	RBM47	95	92.819	Nomascus_leucogenys
ENSPSIG00000017516	RBM47	79	88.399	ENSMEUG00000009516	-	100	88.399	Notamacropus_eugenii
ENSPSIG00000017516	RBM47	70	93.802	ENSOPRG00000016507	-	65	93.802	Ochotona_princeps
ENSPSIG00000017516	RBM47	97	90.341	ENSODEG00000004873	RBM47	89	90.530	Octodon_degus
ENSPSIG00000017516	RBM47	97	78.860	ENSONIG00000009061	rbm47	89	78.860	Oreochromis_niloticus
ENSPSIG00000017516	RBM47	97	88.015	ENSOANG00000008978	RBM47	89	88.764	Ornithorhynchus_anatinus
ENSPSIG00000017516	RBM47	97	90.548	ENSOCUG00000012034	RBM47	89	90.548	Oryctolagus_cuniculus
ENSPSIG00000017516	RBM47	97	80.907	ENSORLG00000005847	rbm47	87	83.033	Oryzias_latipes
ENSPSIG00000017516	RBM47	97	80.907	ENSORLG00020005154	rbm47	87	83.033	Oryzias_latipes_hni
ENSPSIG00000017516	RBM47	97	80.907	ENSORLG00015000066	rbm47	89	80.907	Oryzias_latipes_hsok
ENSPSIG00000017516	RBM47	97	80.907	ENSOMEG00000010730	rbm47	89	80.907	Oryzias_melastigma
ENSPSIG00000017516	RBM47	97	90.584	ENSOGAG00000029367	-	90	90.960	Otolemur_garnettii
ENSPSIG00000017516	RBM47	97	82.765	ENSOGAG00000025193	-	90	82.765	Otolemur_garnettii
ENSPSIG00000017516	RBM47	97	83.144	ENSOARG00000012711	RBM47	89	83.144	Ovis_aries
ENSPSIG00000017516	RBM47	97	90.530	ENSPPAG00000029763	RBM47	95	92.819	Pan_paniscus
ENSPSIG00000017516	RBM47	97	87.311	ENSPPRG00000012873	RBM47	87	92.287	Panthera_pardus
ENSPSIG00000017516	RBM47	81	88.838	ENSPTIG00000017046	RBM47	88	88.838	Panthera_tigris_altaica
ENSPSIG00000017516	RBM47	97	90.530	ENSPTRG00000016006	RBM47	95	92.819	Pan_troglodytes
ENSPSIG00000017516	RBM47	97	90.530	ENSPANG00000005980	RBM47	95	92.819	Papio_anubis
ENSPSIG00000017516	RBM47	93	78.698	ENSPKIG00000013431	RBM47	88	76.515	Paramormyrops_kingsleyae
ENSPSIG00000017516	RBM47	93	79.764	ENSPKIG00000005037	rbm47	89	77.551	Paramormyrops_kingsleyae
ENSPSIG00000017516	RBM47	97	78.639	ENSPMGG00000018540	rbm47	89	79.661	Periophthalmus_magnuspinnatus
ENSPSIG00000017516	RBM47	97	88.910	ENSPEMG00000011088	Rbm47	90	89.098	Peromyscus_maniculatus_bairdii
ENSPSIG00000017516	RBM47	93	83.366	ENSPFOG00000007997	rbm47	89	79.745	Poecilia_formosa
ENSPSIG00000017516	RBM47	93	83.137	ENSPLAG00000002072	rbm47	87	85.638	Poecilia_latipinna
ENSPSIG00000017516	RBM47	97	81.767	ENSPMEG00000017492	rbm47	88	82.908	Poecilia_mexicana
ENSPSIG00000017516	RBM47	93	82.941	ENSPREG00000008456	rbm47	87	85.638	Poecilia_reticulata
ENSPSIG00000017516	RBM47	96	80.076	ENSPPYG00000014688	RBM47	89	80.645	Pongo_abelii
ENSPSIG00000017516	RBM47	74	92.020	ENSPCAG00000011879	RBM47	67	92.269	Procavia_capensis
ENSPSIG00000017516	RBM47	97	86.742	ENSPCOG00000023451	RBM47	90	87.121	Propithecus_coquereli
ENSPSIG00000017516	RBM47	97	90.019	ENSPVAG00000003812	RBM47	89	90.960	Pteropus_vampyrus
ENSPSIG00000017516	RBM47	97	79.159	ENSPNYG00000022868	rbm47	89	79.159	Pundamilia_nyererei
ENSPSIG00000017516	RBM47	97	78.044	ENSPNAG00000007940	rbm47	89	78.598	Pygocentrus_nattereri
ENSPSIG00000017516	RBM47	97	89.623	ENSRNOG00000002408	Rbm47	90	89.623	Rattus_norvegicus
ENSPSIG00000017516	RBM47	97	90.909	ENSRBIG00000039601	RBM47	95	92.819	Rhinopithecus_bieti
ENSPSIG00000017516	RBM47	97	90.909	ENSRROG00000044696	RBM47	95	92.819	Rhinopithecus_roxellana
ENSPSIG00000017516	RBM47	97	87.500	ENSSBOG00000028475	RBM47	100	91.959	Saimiri_boliviensis_boliviensis
ENSPSIG00000017516	RBM47	97	93.195	ENSSHAG00000017576	RBM47	89	93.195	Sarcophilus_harrisii
ENSPSIG00000017516	RBM47	97	77.652	ENSSFOG00015024101	RBM47	88	77.652	Scleropages_formosus
ENSPSIG00000017516	RBM47	97	79.035	ENSSFOG00015012445	rbm47	93	79.963	Scleropages_formosus
ENSPSIG00000017516	RBM47	97	77.901	ENSSMAG00000009744	rbm47	87	82.308	Scophthalmus_maximus
ENSPSIG00000017516	RBM47	97	80.718	ENSSDUG00000022684	rbm47	89	80.718	Seriola_dumerili
ENSPSIG00000017516	RBM47	97	81.509	ENSSLDG00000003109	rbm47	89	81.509	Seriola_lalandi_dorsalis
ENSPSIG00000017516	RBM47	82	90.828	ENSSARG00000001735	RBM47	75	90.828	Sorex_araneus
ENSPSIG00000017516	RBM47	97	93.750	ENSSPUG00000007515	RBM47	89	93.561	Sphenodon_punctatus
ENSPSIG00000017516	RBM47	97	81.356	ENSSPAG00000001257	rbm47	88	83.163	Stegastes_partitus
ENSPSIG00000017516	RBM47	97	91.667	ENSSSCG00000008796	RBM47	89	91.667	Sus_scrofa
ENSPSIG00000017516	RBM47	97	94.518	ENSTGUG00000008705	RBM47	89	94.518	Taeniopygia_guttata
ENSPSIG00000017516	RBM47	97	79.017	ENSTRUG00000014050	rbm47	88	79.017	Takifugu_rubripes
ENSPSIG00000017516	RBM47	97	78.044	ENSTNIG00000006127	rbm47	89	78.044	Tetraodon_nigroviridis
ENSPSIG00000017516	RBM47	69	85.638	ENSTBEG00000001607	RBM47	63	86.170	Tupaia_belangeri
ENSPSIG00000017516	RBM47	97	90.909	ENSTTRG00000002839	RBM47	90	91.288	Tursiops_truncatus
ENSPSIG00000017516	RBM47	97	90.960	ENSUAMG00000021346	RBM47	90	91.149	Ursus_americanus
ENSPSIG00000017516	RBM47	93	91.304	ENSVVUG00000014774	RBM47	90	89.245	Vulpes_vulpes
ENSPSIG00000017516	RBM47	97	89.642	ENSXETG00000012802	rbm47	93	91.123	Xenopus_tropicalis
ENSPSIG00000017516	RBM47	85	85.638	ENSXCOG00000000780	rbm47	87	85.638	Xiphophorus_couchianus
ENSPSIG00000017516	RBM47	97	81.096	ENSXMAG00000009874	rbm47	88	82.653	Xiphophorus_maculatus