EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000018052 (Gene tree)
Gene ID: 102454780
Gene Symbol: BRIP1
Alias: -
Full Name: BRCA1 interacting protein C-terminal helicase 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 164369 bases
Position: chrJH224660.1:7385226-7549594
Accession: 102454780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000020401	DEAD	PF00270.29	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000020498	BRIP1-201	3774	XM_006138723	ENSPSIP00000020401	1244 (aa)	-	K7GJE0

Gene Model

Click here to download ENSPSIG00000018052's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03440	Homologous recombination	KEGG
pss03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000018052's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000018052	BRIP1	68	37.705	ENSAMEG00000001689	-	57	37.705	Ailuropoda_melanoleuca
ENSPSIG00000018052	BRIP1	70	71.494	ENSCJAG00000001292	BRIP1	100	71.494	Callithrix_jacchus
ENSPSIG00000018052	BRIP1	77	67.358	ENSCCAG00000024685	BRIP1	98	67.358	Cebus_capucinus
ENSPSIG00000018052	BRIP1	91	61.697	ENSCATG00000041725	BRIP1	94	61.697	Cercocebus_atys
ENSPSIG00000018052	BRIP1	99	58.485	ENSCSAG00000005928	BRIP1	99	58.485	Chlorocebus_sabaeus
ENSPSIG00000018052	BRIP1	99	88.300	ENSCPBG00000009376	BRIP1	98	88.370	Chrysemys_picta_bellii
ENSPSIG00000018052	BRIP1	99	58.786	ENSCANG00000032026	BRIP1	99	58.786	Colobus_angolensis_palliatus
ENSPSIG00000018052	BRIP1	57	40.984	ENSEASG00005023163	-	56	40.984	Equus_asinus_asinus
ENSPSIG00000018052	BRIP1	71	88.060	ENSECAG00000024392	BRIP1	96	88.060	Equus_caballus
ENSPSIG00000018052	BRIP1	100	87.696	ENSGAGG00000003822	BRIP1	100	87.931	Gopherus_agassizii
ENSPSIG00000018052	BRIP1	99	58.596	ENSMFAG00000044136	BRIP1	99	58.596	Macaca_fascicularis
ENSPSIG00000018052	BRIP1	91	61.697	ENSMMUG00000009027	BRIP1	94	61.697	Macaca_mulatta
ENSPSIG00000018052	BRIP1	91	61.782	ENSMNEG00000040728	BRIP1	98	66.194	Macaca_nemestrina
ENSPSIG00000018052	BRIP1	99	58.517	ENSMLEG00000037601	BRIP1	99	58.517	Mandrillus_leucophaeus
ENSPSIG00000018052	BRIP1	99	58.596	ENSPANG00000022169	BRIP1	99	58.596	Papio_anubis
ENSPSIG00000018052	BRIP1	57	37.288	ENSPCIG00000017939	-	57	37.288	Phascolarctos_cinereus
ENSPSIG00000018052	BRIP1	57	39.344	ENSRNOG00000027513	Rtel1	56	39.344	Rattus_norvegicus
ENSPSIG00000018052	BRIP1	99	57.799	ENSRBIG00000024082	BRIP1	99	57.799	Rhinopithecus_bieti
ENSPSIG00000018052	BRIP1	99	58.333	ENSSBOG00000035665	BRIP1	96	67.839	Saimiri_boliviensis_boliviensis
ENSPSIG00000018052	BRIP1	55	37.705	ENSUAMG00000009334	-	55	37.705	Ursus_americanus
ENSPSIG00000018052	BRIP1	50	37.705	ENSUMAG00000022059	-	54	37.705	Ursus_maritimus