EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000018069 (Gene tree)
Gene ID: 102461553
Gene Symbol: TNRC6C
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 148557 bases
Position: chrJH208844.1:539247-687803
Accession: 102461553
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000020415	Ago_hook	PF10427.9	3.5e-14	1	1
ENSPSIP00000020415	RRM_1	PF00076.22	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000020512	TNRC6C-201	7422	XM_006122950	ENSPSIP00000020415	1721 (aa)	-	K7GJF4

Gene Model

Click here to download ENSPSIG00000018069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000018069's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000018069	TNRC6C	86	42.058	ENSPSIG00000003965	TNRC6A	99	42.142
ENSPSIG00000018069	TNRC6C	99	35.092	ENSPSIG00000005318	TNRC6B	89	35.760

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000018069	TNRC6C	100	84.069	ENSG00000078687	TNRC6C	100	86.407	Homo_sapiens
ENSPSIG00000018069	TNRC6C	77	55.163	ENSAPOG00000019749	tnrc6c1	97	50.269	Acanthochromis_polyacanthus
ENSPSIG00000018069	TNRC6C	99	82.711	ENSAMEG00000013756	TNRC6C	99	82.822	Ailuropoda_melanoleuca
ENSPSIG00000018069	TNRC6C	99	47.065	ENSACIG00000008075	tnrc6c1	96	53.559	Amphilophus_citrinellus
ENSPSIG00000018069	TNRC6C	75	68.960	ENSAOCG00000023968	tnrc6c1	97	50.402	Amphiprion_ocellaris
ENSPSIG00000018069	TNRC6C	77	54.710	ENSAPEG00000009020	tnrc6c1	97	51.083	Amphiprion_percula
ENSPSIG00000018069	TNRC6C	100	88.232	ENSAPLG00000005456	TNRC6C	93	88.176	Anas_platyrhynchos
ENSPSIG00000018069	TNRC6C	100	89.014	ENSACAG00000016198	TNRC6C	91	88.789	Anolis_carolinensis
ENSPSIG00000018069	TNRC6C	100	83.613	ENSANAG00000021554	TNRC6C	100	85.985	Aotus_nancymaae
ENSPSIG00000018069	TNRC6C	99	48.158	ENSACLG00000000424	tnrc6c1	96	53.352	Astatotilapia_calliptera
ENSPSIG00000018069	TNRC6C	97	86.195	ENSBTAG00000018658	TNRC6C	100	83.156	Bos_taurus
ENSPSIG00000018069	TNRC6C	100	83.445	ENSCJAG00000019431	TNRC6C	100	85.866	Callithrix_jacchus
ENSPSIG00000018069	TNRC6C	99	84.018	ENSCAFG00000005224	TNRC6C	92	84.131	Canis_familiaris
ENSPSIG00000018069	TNRC6C	99	85.510	ENSCAFG00020006661	TNRC6C	100	84.665	Canis_lupus_dingo
ENSPSIG00000018069	TNRC6C	100	82.519	ENSCHIG00000026004	TNRC6C	100	81.283	Capra_hircus
ENSPSIG00000018069	TNRC6C	97	84.153	ENSTSYG00000005403	TNRC6C	100	84.037	Carlito_syrichta
ENSPSIG00000018069	TNRC6C	100	78.755	ENSCAPG00000007307	TNRC6C	92	78.698	Cavia_aperea
ENSPSIG00000018069	TNRC6C	100	83.563	ENSCPOG00000000467	TNRC6C	100	84.023	Cavia_porcellus
ENSPSIG00000018069	TNRC6C	100	83.893	ENSCCAG00000030524	TNRC6C	100	86.280	Cebus_capucinus
ENSPSIG00000018069	TNRC6C	100	84.004	ENSCATG00000033135	TNRC6C	100	86.399	Cercocebus_atys
ENSPSIG00000018069	TNRC6C	100	84.828	ENSCLAG00000011139	TNRC6C	92	85.172	Chinchilla_lanigera
ENSPSIG00000018069	TNRC6C	99	84.261	ENSCSAG00000005167	TNRC6C	92	84.317	Chlorocebus_sabaeus
ENSPSIG00000018069	TNRC6C	76	88.676	ENSCHOG00000000088	TNRC6C	75	89.533	Choloepus_hoffmanni
ENSPSIG00000018069	TNRC6C	100	94.934	ENSCPBG00000027960	TNRC6C	100	95.021	Chrysemys_picta_bellii
ENSPSIG00000018069	TNRC6C	100	83.557	ENSCANG00000041771	TNRC6C	100	86.162	Colobus_angolensis_palliatus
ENSPSIG00000018069	TNRC6C	100	82.780	ENSCGRG00001022686	Tnrc6c	100	82.214	Cricetulus_griseus_chok1gshd
ENSPSIG00000018069	TNRC6C	100	83.161	ENSCGRG00000018041	Tnrc6c	100	82.214	Cricetulus_griseus_crigri
ENSPSIG00000018069	TNRC6C	99	48.114	ENSCSEG00000012744	tnrc6c1	93	48.732	Cynoglossus_semilaevis
ENSPSIG00000018069	TNRC6C	99	53.624	ENSDARG00000076847	tnrc6c1	96	55.822	Danio_rerio
ENSPSIG00000018069	TNRC6C	100	84.045	ENSDNOG00000003247	TNRC6C	94	84.157	Dasypus_novemcinctus
ENSPSIG00000018069	TNRC6C	100	80.149	ENSDORG00000004558	Tnrc6c	100	80.506	Dipodomys_ordii
ENSPSIG00000018069	TNRC6C	90	78.068	ENSETEG00000005527	TNRC6C	89	78.540	Echinops_telfairi
ENSPSIG00000018069	TNRC6C	97	85.198	ENSEASG00005004799	TNRC6C	100	85.198	Equus_asinus_asinus
ENSPSIG00000018069	TNRC6C	100	85.336	ENSECAG00000012486	TNRC6C	92	85.049	Equus_caballus
ENSPSIG00000018069	TNRC6C	96	84.264	ENSEEUG00000010008	TNRC6C	96	84.264	Erinaceus_europaeus
ENSPSIG00000018069	TNRC6C	100	81.544	ENSFCAG00000028358	TNRC6C	100	83.619	Felis_catus
ENSPSIG00000018069	TNRC6C	97	87.166	ENSFALG00000000848	TNRC6C	100	87.280	Ficedula_albicollis
ENSPSIG00000018069	TNRC6C	100	84.598	ENSFDAG00000010368	TNRC6C	100	85.000	Fukomys_damarensis
ENSPSIG00000018069	TNRC6C	99	47.541	ENSFHEG00000002936	tnrc6c1	97	47.833	Fundulus_heteroclitus
ENSPSIG00000018069	TNRC6C	100	90.304	ENSGALG00000001725	TNRC6C	100	92.285	Gallus_gallus
ENSPSIG00000018069	TNRC6C	99	49.084	ENSGAFG00000019019	tnrc6c1	97	50.631	Gambusia_affinis
ENSPSIG00000018069	TNRC6C	88	55.656	ENSGACG00000012320	tnrc6c1	90	49.036	Gasterosteus_aculeatus
ENSPSIG00000018069	TNRC6C	100	94.534	ENSGAGG00000022043	TNRC6C	98	94.476	Gopherus_agassizii
ENSPSIG00000018069	TNRC6C	100	83.622	ENSGGOG00000011304	TNRC6C	100	85.638	Gorilla_gorilla
ENSPSIG00000018069	TNRC6C	99	48.399	ENSHBUG00000010846	tnrc6c1	96	53.476	Haplochromis_burtoni
ENSPSIG00000018069	TNRC6C	100	85.000	ENSHGLG00000004809	TNRC6C	92	85.402	Heterocephalus_glaber_female
ENSPSIG00000018069	TNRC6C	100	84.211	ENSHGLG00100012597	TNRC6C	92	84.897	Heterocephalus_glaber_male
ENSPSIG00000018069	TNRC6C	99	53.115	ENSIPUG00000000818	tnrc6c1	92	53.118	Ictalurus_punctatus
ENSPSIG00000018069	TNRC6C	100	84.328	ENSSTOG00000009101	TNRC6C	100	84.673	Ictidomys_tridecemlineatus
ENSPSIG00000018069	TNRC6C	100	82.245	ENSJJAG00000017055	Tnrc6c	91	82.073	Jaculus_jaculus
ENSPSIG00000018069	TNRC6C	99	48.059	ENSKMAG00000021023	tnrc6c1	97	51.497	Kryptolebias_marmoratus
ENSPSIG00000018069	TNRC6C	100	76.857	ENSLACG00000015283	TNRC6C	100	77.029	Latimeria_chalumnae
ENSPSIG00000018069	TNRC6C	100	57.343	ENSLOCG00000013377	tnrc6c1	92	57.818	Lepisosteus_oculatus
ENSPSIG00000018069	TNRC6C	100	85.665	ENSLAFG00000011122	TNRC6C	93	85.493	Loxodonta_africana
ENSPSIG00000018069	TNRC6C	100	84.060	ENSMFAG00000043943	TNRC6C	100	86.458	Macaca_fascicularis
ENSPSIG00000018069	TNRC6C	100	84.438	ENSMMUG00000011924	TNRC6C	100	86.458	Macaca_mulatta
ENSPSIG00000018069	TNRC6C	100	84.004	ENSMNEG00000030405	TNRC6C	100	86.399	Macaca_nemestrina
ENSPSIG00000018069	TNRC6C	100	84.060	ENSMLEG00000033436	TNRC6C	100	86.458	Mandrillus_leucophaeus
ENSPSIG00000018069	TNRC6C	94	53.659	ENSMAMG00000023613	tnrc6c1	100	49.944	Mastacembelus_armatus
ENSPSIG00000018069	TNRC6C	99	48.287	ENSMZEG00005010920	tnrc6c1	96	53.352	Maylandia_zebra
ENSPSIG00000018069	TNRC6C	100	82.073	ENSMGAG00000003906	TNRC6C	93	81.737	Meleagris_gallopavo
ENSPSIG00000018069	TNRC6C	97	82.568	ENSMAUG00000021618	Tnrc6c	100	82.744	Mesocricetus_auratus
ENSPSIG00000018069	TNRC6C	100	84.107	ENSMICG00000003952	TNRC6C	100	86.213	Microcebus_murinus
ENSPSIG00000018069	TNRC6C	100	84.310	ENSMOCG00000015879	Tnrc6c	100	84.598	Microtus_ochrogaster
ENSPSIG00000018069	TNRC6C	84	55.916	ENSMMOG00000005203	tnrc6c1	97	52.174	Mola_mola
ENSPSIG00000018069	TNRC6C	100	87.200	ENSMODG00000001785	TNRC6C	92	86.514	Monodelphis_domestica
ENSPSIG00000018069	TNRC6C	100	83.851	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	84.080	Mus_caroli
ENSPSIG00000018069	TNRC6C	100	83.678	ENSMUSG00000025571	Tnrc6c	100	83.908	Mus_musculus
ENSPSIG00000018069	TNRC6C	100	83.966	MGP_PahariEiJ_G0018593	Tnrc6c	100	84.195	Mus_pahari
ENSPSIG00000018069	TNRC6C	100	83.736	MGP_SPRETEiJ_G0018309	Tnrc6c	100	83.966	Mus_spretus
ENSPSIG00000018069	TNRC6C	99	81.465	ENSMPUG00000013348	TNRC6C	91	81.972	Mustela_putorius_furo
ENSPSIG00000018069	TNRC6C	100	76.923	ENSMLUG00000014431	TNRC6C	91	77.455	Myotis_lucifugus
ENSPSIG00000018069	TNRC6C	100	83.744	ENSNGAG00000012203	Tnrc6c	92	83.915	Nannospalax_galili
ENSPSIG00000018069	TNRC6C	99	48.398	ENSNBRG00000005344	tnrc6c1	96	53.402	Neolamprologus_brichardi
ENSPSIG00000018069	TNRC6C	99	82.073	ENSNLEG00000000047	TNRC6C	92	81.961	Nomascus_leucogenys
ENSPSIG00000018069	TNRC6C	98	81.695	ENSMEUG00000005104	TNRC6C	100	81.460	Notamacropus_eugenii
ENSPSIG00000018069	TNRC6C	97	85.148	ENSODEG00000012499	TNRC6C	100	85.562	Octodon_degus
ENSPSIG00000018069	TNRC6C	91	51.106	ENSONIG00000002210	tnrc6c1	94	55.649	Oreochromis_niloticus
ENSPSIG00000018069	TNRC6C	100	87.234	ENSOANG00000009758	-	92	87.234	Ornithorhynchus_anatinus
ENSPSIG00000018069	TNRC6C	99	48.130	ENSORLG00000009837	tnrc6c1	100	68.773	Oryzias_latipes
ENSPSIG00000018069	TNRC6C	99	46.769	ENSORLG00020016510	tnrc6c1	100	48.972	Oryzias_latipes_hni
ENSPSIG00000018069	TNRC6C	81	43.019	ENSORLG00015000171	tnrc6c1	98	44.152	Oryzias_latipes_hsok
ENSPSIG00000018069	TNRC6C	99	48.186	ENSOMEG00000000357	tnrc6c1	97	49.080	Oryzias_melastigma
ENSPSIG00000018069	TNRC6C	97	82.591	ENSOGAG00000007197	TNRC6C	100	82.418	Otolemur_garnettii
ENSPSIG00000018069	TNRC6C	96	77.582	ENSOARG00000006041	TNRC6C	90	77.817	Ovis_aries
ENSPSIG00000018069	TNRC6C	100	84.004	ENSPPAG00000027160	TNRC6C	100	86.339	Pan_paniscus
ENSPSIG00000018069	TNRC6C	100	81.655	ENSPPRG00000018881	TNRC6C	100	83.737	Panthera_pardus
ENSPSIG00000018069	TNRC6C	90	84.946	ENSPTIG00000008791	TNRC6C	86	84.965	Panthera_tigris_altaica
ENSPSIG00000018069	TNRC6C	100	84.004	ENSPTRG00000009699	TNRC6C	100	86.339	Pan_troglodytes
ENSPSIG00000018069	TNRC6C	100	84.060	ENSPANG00000019994	TNRC6C	100	86.339	Papio_anubis
ENSPSIG00000018069	TNRC6C	93	51.473	ENSPKIG00000005428	tnrc6c1	98	51.486	Paramormyrops_kingsleyae
ENSPSIG00000018069	TNRC6C	63	55.484	ENSPMGG00000022911	tnrc6c1	97	64.898	Periophthalmus_magnuspinnatus
ENSPSIG00000018069	TNRC6C	100	83.581	ENSPEMG00000009785	Tnrc6c	100	81.567	Peromyscus_maniculatus_bairdii
ENSPSIG00000018069	TNRC6C	56	83.077	ENSPCIG00000017421	-	99	82.769	Phascolarctos_cinereus
ENSPSIG00000018069	TNRC6C	99	48.898	ENSPFOG00000012560	tnrc6c1	96	55.367	Poecilia_formosa
ENSPSIG00000018069	TNRC6C	91	50.265	ENSPLAG00000021055	tnrc6c1	97	50.659	Poecilia_latipinna
ENSPSIG00000018069	TNRC6C	100	84.607	ENSPPYG00000008679	TNRC6C	91	84.663	Pongo_abelii
ENSPSIG00000018069	TNRC6C	93	90.995	ENSPCAG00000012510	TNRC6C	94	90.995	Procavia_capensis
ENSPSIG00000018069	TNRC6C	97	86.280	ENSPCOG00000021451	TNRC6C	100	86.576	Propithecus_coquereli
ENSPSIG00000018069	TNRC6C	96	87.288	ENSPVAG00000002008	TNRC6C	95	87.288	Pteropus_vampyrus
ENSPSIG00000018069	TNRC6C	99	47.802	ENSPNYG00000014477	tnrc6c1	97	52.209	Pundamilia_nyererei
ENSPSIG00000018069	TNRC6C	97	83.392	ENSRNOG00000022395	Tnrc6c	100	83.688	Rattus_norvegicus
ENSPSIG00000018069	TNRC6C	100	84.172	ENSRBIG00000027777	TNRC6C	100	86.576	Rhinopithecus_bieti
ENSPSIG00000018069	TNRC6C	100	84.172	ENSRROG00000042912	TNRC6C	100	86.576	Rhinopithecus_roxellana
ENSPSIG00000018069	TNRC6C	100	83.782	ENSSBOG00000023981	TNRC6C	100	83.584	Saimiri_boliviensis_boliviensis
ENSPSIG00000018069	TNRC6C	51	89.924	ENSSHAG00000018330	-	100	89.166	Sarcophilus_harrisii
ENSPSIG00000018069	TNRC6C	61	56.284	ENSSFOG00015004735	-	99	62.663	Scleropages_formosus
ENSPSIG00000018069	TNRC6C	72	61.699	ENSSFOG00015006475	tnrc6c1	94	53.442	Scleropages_formosus
ENSPSIG00000018069	TNRC6C	99	48.380	ENSSMAG00000012761	tnrc6c1	99	50.756	Scophthalmus_maximus
ENSPSIG00000018069	TNRC6C	99	50.501	ENSSDUG00000002366	tnrc6c1	96	51.411	Seriola_dumerili
ENSPSIG00000018069	TNRC6C	91	50.266	ENSSLDG00000025613	tnrc6c1	97	50.741	Seriola_lalandi_dorsalis
ENSPSIG00000018069	TNRC6C	91	89.916	ENSSARG00000006816	TNRC6C	91	89.916	Sorex_araneus
ENSPSIG00000018069	TNRC6C	82	85.887	ENSSPUG00000007341	TNRC6C	94	85.685	Sphenodon_punctatus
ENSPSIG00000018069	TNRC6C	76	53.617	ENSSPAG00000014977	tnrc6c1	96	49.431	Stegastes_partitus
ENSPSIG00000018069	TNRC6C	94	84.901	ENSSSCG00000034373	TNRC6C	100	84.691	Sus_scrofa
ENSPSIG00000018069	TNRC6C	100	91.878	ENSTGUG00000007733	TNRC6C	100	91.935	Taeniopygia_guttata
ENSPSIG00000018069	TNRC6C	77	54.029	ENSTRUG00000011685	tnrc6c1	100	49.272	Takifugu_rubripes
ENSPSIG00000018069	TNRC6C	77	55.425	ENSTNIG00000005273	tnrc6c1	100	60.555	Tetraodon_nigroviridis
ENSPSIG00000018069	TNRC6C	61	88.281	ENSTBEG00000005046	TNRC6C	95	88.281	Tupaia_belangeri
ENSPSIG00000018069	TNRC6C	100	85.402	ENSTTRG00000010828	TNRC6C	99	85.287	Tursiops_truncatus
ENSPSIG00000018069	TNRC6C	99	83.638	ENSUMAG00000013614	TNRC6C	92	83.696	Ursus_maritimus
ENSPSIG00000018069	TNRC6C	50	76.316	ENSVPAG00000006765	-	99	76.180	Vicugna_pacos
ENSPSIG00000018069	TNRC6C	97	85.790	ENSVVUG00000015268	TNRC6C	100	85.850	Vulpes_vulpes
ENSPSIG00000018069	TNRC6C	97	75.206	ENSXETG00000019470	tnrc6c	100	74.897	Xenopus_tropicalis
ENSPSIG00000018069	TNRC6C	99	49.442	ENSXMAG00000025971	tnrc6c1	97	50.373	Xiphophorus_maculatus