EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000018198 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: cleavage and polyadenylation specificity factor subunit 4-like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 6497 bases
Position: chrJH207658.1:1528601-1535097
Accession: 102453133
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000020564	zf-CCCH	PF00642.24	2.4e-14	1	1
ENSPSIP00000020564	zf-CCHC	PF00098.23	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000020661	-	579	XM_006119081	ENSPSIP00000020564	192 (aa)	-	K7GJV3

Gene Model

Click here to download ENSPSIG00000018198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000018198's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000018198	-	99	57.407	ENSPSIG00000011229	CPSF4	100	58.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000018198	-	100	64.767	ENSG00000160917	CPSF4	100	84.821	Homo_sapiens
ENSPSIG00000018198	-	81	48.023	ENSAPOG00000004921	cpsf4	100	48.023	Acanthochromis_polyacanthus
ENSPSIG00000018198	-	100	57.798	ENSAMEG00000006252	CPSF4	81	58.904	Ailuropoda_melanoleuca
ENSPSIG00000018198	-	100	65.625	ENSACIG00000009248	cpsf4	79	65.625	Amphilophus_citrinellus
ENSPSIG00000018198	-	100	58.411	ENSAOCG00000019616	cpsf4	81	58.411	Amphiprion_ocellaris
ENSPSIG00000018198	-	100	58.411	ENSAPEG00000011679	cpsf4	81	58.411	Amphiprion_percula
ENSPSIG00000018198	-	100	63.500	ENSATEG00000007010	cpsf4	79	63.500	Anabas_testudineus
ENSPSIG00000018198	-	100	56.306	ENSACAG00000012941	CPSF4	72	58.257	Anolis_carolinensis
ENSPSIG00000018198	-	100	57.798	ENSANAG00000021360	CPSF4	81	58.904	Aotus_nancymaae
ENSPSIG00000018198	-	100	60.417	ENSACLG00000010374	cpsf4	81	59.813	Astatotilapia_calliptera
ENSPSIG00000018198	-	100	56.364	ENSAMXG00000031647	cpsf4	81	56.364	Astyanax_mexicanus
ENSPSIG00000018198	-	100	65.803	ENSBTAG00000002090	CPSF4	79	65.803	Bos_taurus
ENSPSIG00000018198	-	100	57.944	ENSCJAG00000015826	CPSF4	81	58.904	Callithrix_jacchus
ENSPSIG00000018198	-	100	58.257	ENSCAFG00000015036	CPSF4	70	84.211	Canis_familiaris
ENSPSIG00000018198	-	100	58.257	ENSCAFG00020014462	CPSF4	83	58.904	Canis_lupus_dingo
ENSPSIG00000018198	-	100	57.798	ENSCHIG00000014313	CPSF4	81	58.904	Capra_hircus
ENSPSIG00000018198	-	100	64.767	ENSTSYG00000005712	-	79	65.306	Carlito_syrichta
ENSPSIG00000018198	-	100	60.825	ENSTSYG00000008195	-	85	61.026	Carlito_syrichta
ENSPSIG00000018198	-	100	58.763	ENSTSYG00000014604	-	79	59.391	Carlito_syrichta
ENSPSIG00000018198	-	100	57.798	ENSCAPG00000013881	CPSF4	87	58.904	Cavia_aperea
ENSPSIG00000018198	-	100	65.285	ENSCPOG00000001783	CPSF4	79	65.306	Cavia_porcellus
ENSPSIG00000018198	-	100	57.798	ENSCCAG00000028291	CPSF4	81	58.904	Cebus_capucinus
ENSPSIG00000018198	-	100	63.542	ENSCATG00000038440	CPSF4	78	63.542	Cercocebus_atys
ENSPSIG00000018198	-	100	57.798	ENSCLAG00000007050	CPSF4	81	58.904	Chinchilla_lanigera
ENSPSIG00000018198	-	100	57.798	ENSCSAG00000017795	CPSF4	81	58.904	Chlorocebus_sabaeus
ENSPSIG00000018198	-	60	92.174	ENSCPBG00000010269	-	69	92.174	Chrysemys_picta_bellii
ENSPSIG00000018198	-	99	57.407	ENSCPBG00000020869	CPSF4	100	58.986	Chrysemys_picta_bellii
ENSPSIG00000018198	-	94	50.495	ENSCING00000021080	-	77	50.990	Ciona_intestinalis
ENSPSIG00000018198	-	94	46.288	ENSCSAVG00000011469	-	79	46.288	Ciona_savignyi
ENSPSIG00000018198	-	100	64.767	ENSCANG00000019384	CPSF4	78	64.767	Colobus_angolensis_palliatus
ENSPSIG00000018198	-	100	65.285	ENSCGRG00001024184	Cpsf4	79	65.306	Cricetulus_griseus_chok1gshd
ENSPSIG00000018198	-	100	57.798	ENSCGRG00000013892	Cpsf4	81	58.904	Cricetulus_griseus_crigri
ENSPSIG00000018198	-	100	59.813	ENSCSEG00000019055	cpsf4	81	59.813	Cynoglossus_semilaevis
ENSPSIG00000018198	-	100	58.411	ENSCVAG00000016528	cpsf4	81	58.411	Cyprinodon_variegatus
ENSPSIG00000018198	-	100	55.856	ENSDARG00000020217	cpsf4	81	57.919	Danio_rerio
ENSPSIG00000018198	-	100	57.798	ENSDNOG00000006344	CPSF4	81	58.904	Dasypus_novemcinctus
ENSPSIG00000018198	-	99	57.870	ENSDORG00000000742	Cpsf4	99	58.986	Dipodomys_ordii
ENSPSIG00000018198	-	98	49.153	FBgn0015621	Clp	79	49.576	Drosophila_melanogaster
ENSPSIG00000018198	-	98	63.830	ENSEBUG00000012552	cpsf4	76	63.830	Eptatretus_burgeri
ENSPSIG00000018198	-	100	65.285	ENSEASG00005002487	CPSF4	79	65.306	Equus_asinus_asinus
ENSPSIG00000018198	-	100	57.798	ENSECAG00000007525	CPSF4	81	58.904	Equus_caballus
ENSPSIG00000018198	-	100	58.559	ENSELUG00000011481	cpsf4	81	57.919	Esox_lucius
ENSPSIG00000018198	-	100	57.798	ENSFCAG00000015070	CPSF4	81	58.904	Felis_catus
ENSPSIG00000018198	-	54	69.369	ENSFALG00000012906	-	73	69.369	Ficedula_albicollis
ENSPSIG00000018198	-	100	65.285	ENSFALG00000013799	CPSF4	79	65.285	Ficedula_albicollis
ENSPSIG00000018198	-	100	57.798	ENSFDAG00000014092	CPSF4	90	58.904	Fukomys_damarensis
ENSPSIG00000018198	-	100	59.535	ENSFHEG00000010880	cpsf4	81	59.535	Fundulus_heteroclitus
ENSPSIG00000018198	-	100	61.137	ENSGMOG00000002330	cpsf4	79	61.137	Gadus_morhua
ENSPSIG00000018198	-	81	37.097	ENSGALG00000004441	-	92	37.097	Gallus_gallus
ENSPSIG00000018198	-	100	65.285	ENSGALG00000004714	CPSF4	79	65.285	Gallus_gallus
ENSPSIG00000018198	-	100	59.813	ENSGAFG00000010580	cpsf4	81	59.813	Gambusia_affinis
ENSPSIG00000018198	-	100	61.692	ENSGACG00000007792	cpsf4	79	61.692	Gasterosteus_aculeatus
ENSPSIG00000018198	-	100	57.339	ENSGAGG00000021835	CPSF4	81	58.904	Gopherus_agassizii
ENSPSIG00000018198	-	59	91.228	ENSGAGG00000020579	-	64	91.228	Gopherus_agassizii
ENSPSIG00000018198	-	100	57.798	ENSGGOG00000015131	CPSF4	81	58.904	Gorilla_gorilla
ENSPSIG00000018198	-	100	59.813	ENSHBUG00000013699	cpsf4	81	59.813	Haplochromis_burtoni
ENSPSIG00000018198	-	100	57.727	ENSHGLG00000017150	CPSF4	81	58.371	Heterocephalus_glaber_female
ENSPSIG00000018198	-	64	49.180	ENSHGLG00100017302	-	70	40.104	Heterocephalus_glaber_male
ENSPSIG00000018198	-	98	57.407	ENSHGLG00100009215	-	93	58.065	Heterocephalus_glaber_male
ENSPSIG00000018198	-	100	59.535	ENSHCOG00000004397	cpsf4	81	59.535	Hippocampus_comes
ENSPSIG00000018198	-	100	57.273	ENSIPUG00000017147	cpsf4	81	57.014	Ictalurus_punctatus
ENSPSIG00000018198	-	100	66.321	ENSSTOG00000001688	CPSF4	79	66.321	Ictidomys_tridecemlineatus
ENSPSIG00000018198	-	100	57.798	ENSJJAG00000019426	Cpsf4	81	58.904	Jaculus_jaculus
ENSPSIG00000018198	-	100	57.944	ENSKMAG00000015642	cpsf4	81	57.944	Kryptolebias_marmoratus
ENSPSIG00000018198	-	100	57.658	ENSLACG00000010938	CPSF4	81	57.658	Latimeria_chalumnae
ENSPSIG00000018198	-	100	63.918	ENSLACG00000018470	-	79	63.918	Latimeria_chalumnae
ENSPSIG00000018198	-	100	56.054	ENSLOCG00000004814	cpsf4	81	56.621	Lepisosteus_oculatus
ENSPSIG00000018198	-	100	58.257	ENSLAFG00000000159	CPSF4	100	52.332	Loxodonta_africana
ENSPSIG00000018198	-	100	64.767	ENSMFAG00000001462	CPSF4	100	65.464	Macaca_fascicularis
ENSPSIG00000018198	-	100	57.798	ENSMMUG00000019191	CPSF4	81	58.904	Macaca_mulatta
ENSPSIG00000018198	-	100	64.767	ENSMNEG00000032306	CPSF4	78	64.767	Macaca_nemestrina
ENSPSIG00000018198	-	100	63.542	ENSMLEG00000034721	CPSF4	78	63.542	Mandrillus_leucophaeus
ENSPSIG00000018198	-	100	59.535	ENSMAMG00000006244	cpsf4	81	59.535	Mastacembelus_armatus
ENSPSIG00000018198	-	100	59.813	ENSMZEG00005007515	cpsf4	81	59.813	Maylandia_zebra
ENSPSIG00000018198	-	100	65.285	ENSMGAG00000004235	CPSF4	92	65.285	Meleagris_gallopavo
ENSPSIG00000018198	-	100	57.798	ENSMAUG00000021253	Cpsf4	81	58.904	Mesocricetus_auratus
ENSPSIG00000018198	-	100	57.798	ENSMICG00000017429	CPSF4	81	58.904	Microcebus_murinus
ENSPSIG00000018198	-	100	57.798	ENSMOCG00000014901	Cpsf4	81	58.904	Microtus_ochrogaster
ENSPSIG00000018198	-	100	59.535	ENSMMOG00000001813	cpsf4	71	79.167	Mola_mola
ENSPSIG00000018198	-	100	57.798	ENSMODG00000001367	CPSF4	81	58.904	Monodelphis_domestica
ENSPSIG00000018198	-	100	57.209	ENSMALG00000012611	cpsf4	85	57.277	Monopterus_albus
ENSPSIG00000018198	-	100	66.321	MGP_CAROLIEiJ_G0028012	Cpsf4	79	66.321	Mus_caroli
ENSPSIG00000018198	-	100	66.321	ENSMUSG00000029625	Cpsf4	79	66.321	Mus_musculus
ENSPSIG00000018198	-	100	66.321	MGP_PahariEiJ_G0024581	Cpsf4	79	66.321	Mus_pahari
ENSPSIG00000018198	-	100	66.321	MGP_SPRETEiJ_G0029013	Cpsf4	79	66.321	Mus_spretus
ENSPSIG00000018198	-	100	57.798	ENSMPUG00000016508	CPSF4	81	58.904	Mustela_putorius_furo
ENSPSIG00000018198	-	100	66.321	ENSMLUG00000010980	CPSF4	92	66.321	Myotis_lucifugus
ENSPSIG00000018198	-	100	57.798	ENSNGAG00000001567	Cpsf4	81	58.904	Nannospalax_galili
ENSPSIG00000018198	-	100	59.813	ENSNBRG00000003943	cpsf4	87	59.813	Neolamprologus_brichardi
ENSPSIG00000018198	-	100	64.767	ENSNLEG00000011074	CPSF4	79	65.306	Nomascus_leucogenys
ENSPSIG00000018198	-	100	57.798	ENSMEUG00000006955	CPSF4	81	58.904	Notamacropus_eugenii
ENSPSIG00000018198	-	100	57.798	ENSOPRG00000013663	CPSF4	81	58.904	Ochotona_princeps
ENSPSIG00000018198	-	100	49.239	ENSODEG00000009779	-	78	49.239	Octodon_degus
ENSPSIG00000018198	-	95	62.500	ENSODEG00000018283	-	74	63.784	Octodon_degus
ENSPSIG00000018198	-	100	57.798	ENSODEG00000011181	-	81	58.904	Octodon_degus
ENSPSIG00000018198	-	100	59.813	ENSONIG00000008495	cpsf4	81	59.813	Oreochromis_niloticus
ENSPSIG00000018198	-	100	57.604	ENSOANG00000007729	CPSF4	93	57.604	Ornithorhynchus_anatinus
ENSPSIG00000018198	-	97	55.656	ENSOANG00000009568	-	81	55.656	Ornithorhynchus_anatinus
ENSPSIG00000018198	-	100	57.798	ENSOCUG00000002437	CPSF4	57	58.904	Oryctolagus_cuniculus
ENSPSIG00000018198	-	100	57.944	ENSORLG00000022798	cpsf4	81	57.944	Oryzias_latipes
ENSPSIG00000018198	-	100	57.944	ENSORLG00020008548	cpsf4	81	57.944	Oryzias_latipes_hni
ENSPSIG00000018198	-	100	57.944	ENSORLG00015019575	cpsf4	81	57.944	Oryzias_latipes_hsok
ENSPSIG00000018198	-	100	58.411	ENSOMEG00000005176	cpsf4	81	58.411	Oryzias_melastigma
ENSPSIG00000018198	-	100	57.798	ENSOGAG00000010884	CPSF4	81	58.904	Otolemur_garnettii
ENSPSIG00000018198	-	97	53.241	ENSOARG00000018668	CPSF4	79	53.241	Ovis_aries
ENSPSIG00000018198	-	100	57.798	ENSPPAG00000043355	CPSF4	81	58.904	Pan_paniscus
ENSPSIG00000018198	-	100	57.798	ENSPPRG00000003134	CPSF4	81	58.904	Panthera_pardus
ENSPSIG00000018198	-	100	57.798	ENSPTIG00000005604	CPSF4	81	58.904	Panthera_tigris_altaica
ENSPSIG00000018198	-	100	57.798	ENSPTRG00000019453	CPSF4	81	58.904	Pan_troglodytes
ENSPSIG00000018198	-	100	64.767	ENSPANG00000023123	CPSF4	78	64.767	Papio_anubis
ENSPSIG00000018198	-	100	56.951	ENSPKIG00000014278	cpsf4	81	56.951	Paramormyrops_kingsleyae
ENSPSIG00000018198	-	100	65.104	ENSPMGG00000017735	cpsf4	81	65.104	Periophthalmus_magnuspinnatus
ENSPSIG00000018198	-	100	57.798	ENSPEMG00000004508	Cpsf4	81	58.904	Peromyscus_maniculatus_bairdii
ENSPSIG00000018198	-	100	57.798	ENSPCIG00000024776	CPSF4	81	58.904	Phascolarctos_cinereus
ENSPSIG00000018198	-	100	59.813	ENSPFOG00000014912	cpsf4	81	59.813	Poecilia_formosa
ENSPSIG00000018198	-	100	62.051	ENSPLAG00000009599	cpsf4	79	62.051	Poecilia_latipinna
ENSPSIG00000018198	-	100	59.813	ENSPMEG00000009790	cpsf4	81	59.813	Poecilia_mexicana
ENSPSIG00000018198	-	100	59.346	ENSPREG00000018166	cpsf4	81	59.346	Poecilia_reticulata
ENSPSIG00000018198	-	100	57.339	ENSPPYG00000017378	CPSF4	93	58.447	Pongo_abelii
ENSPSIG00000018198	-	99	58.333	ENSPCAG00000001892	CPSF4	80	59.447	Procavia_capensis
ENSPSIG00000018198	-	100	57.798	ENSPCOG00000012771	CPSF4	84	58.904	Propithecus_coquereli
ENSPSIG00000018198	-	99	57.870	ENSPVAG00000007531	CPSF4	80	58.986	Pteropus_vampyrus
ENSPSIG00000018198	-	100	59.813	ENSPNYG00000018559	cpsf4	81	59.813	Pundamilia_nyererei
ENSPSIG00000018198	-	100	58.182	ENSPNAG00000003736	cpsf4	81	58.182	Pygocentrus_nattereri
ENSPSIG00000018198	-	100	66.321	ENSRNOG00000000985	Cpsf4	79	66.321	Rattus_norvegicus
ENSPSIG00000018198	-	100	57.798	ENSRBIG00000033886	CPSF4	93	58.904	Rhinopithecus_bieti
ENSPSIG00000018198	-	100	64.767	ENSRROG00000040431	CPSF4	79	65.306	Rhinopithecus_roxellana
ENSPSIG00000018198	-	99	64.921	ENSSBOG00000020493	CPSF4	100	65.464	Saimiri_boliviensis_boliviensis
ENSPSIG00000018198	-	100	57.798	ENSSHAG00000011533	CPSF4	81	58.904	Sarcophilus_harrisii
ENSPSIG00000018198	-	100	55.556	ENSSFOG00015007883	cpsf4	82	56.444	Scleropages_formosus
ENSPSIG00000018198	-	100	62.069	ENSSMAG00000006374	cpsf4	79	62.069	Scophthalmus_maximus
ENSPSIG00000018198	-	100	58.796	ENSSDUG00000018887	cpsf4	81	58.796	Seriola_dumerili
ENSPSIG00000018198	-	100	58.796	ENSSLDG00000019078	cpsf4	81	58.796	Seriola_lalandi_dorsalis
ENSPSIG00000018198	-	100	57.798	ENSSARG00000012416	CPSF4	93	58.904	Sorex_araneus
ENSPSIG00000018198	-	97	62.032	ENSSPUG00000014803	-	77	62.032	Sphenodon_punctatus
ENSPSIG00000018198	-	100	57.798	ENSSPUG00000003549	CPSF4	81	57.798	Sphenodon_punctatus
ENSPSIG00000018198	-	100	65.625	ENSSPAG00000006174	cpsf4	79	65.625	Stegastes_partitus
ENSPSIG00000018198	-	100	65.285	ENSSSCG00000026896	CPSF4	79	65.285	Sus_scrofa
ENSPSIG00000018198	-	99	65.445	ENSTGUG00000007552	CPSF4	78	65.445	Taeniopygia_guttata
ENSPSIG00000018198	-	100	59.346	ENSTRUG00000024220	cpsf4	81	59.346	Takifugu_rubripes
ENSPSIG00000018198	-	100	59.155	ENSTNIG00000006265	cpsf4	81	59.346	Tetraodon_nigroviridis
ENSPSIG00000018198	-	100	52.752	ENSTBEG00000011406	CPSF4	93	53.425	Tupaia_belangeri
ENSPSIG00000018198	-	64	81.148	ENSTTRG00000003007	CPSF4	52	74.286	Tursiops_truncatus
ENSPSIG00000018198	-	91	65.341	ENSUAMG00000008051	CPSF4	68	65.341	Ursus_americanus
ENSPSIG00000018198	-	100	66.321	ENSUMAG00000009474	CPSF4	79	66.321	Ursus_maritimus
ENSPSIG00000018198	-	100	64.767	ENSVVUG00000008824	CPSF4	79	65.306	Vulpes_vulpes
ENSPSIG00000018198	-	100	54.386	ENSXETG00000009892	cpsf4	82	55.022	Xenopus_tropicalis
ENSPSIG00000018198	-	98	56.542	ENSXETG00000004641	cpsf4l	80	56.542	Xenopus_tropicalis
ENSPSIG00000018198	-	100	59.813	ENSXCOG00000016040	cpsf4	81	59.813	Xiphophorus_couchianus
ENSPSIG00000018198	-	100	59.813	ENSXMAG00000024670	cpsf4	81	59.813	Xiphophorus_maculatus