EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000018258 (Gene tree)
Gene ID: 102453890
Gene Symbol: TSR1
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 9588 bases
Position: chrJH207368.1:145543-155130
Accession: 102453890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000020640	AARP2CN	PF08142.12	2.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000020737	TSR1-201	2106	XM_006118024	ENSPSIP00000020640	701 (aa)	XP_006118086	K7GK29

Gene Model

Click here to download ENSPSIG00000018258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000018258's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000018258	TSR1	98	69.242	ENSG00000167721	TSR1	91	66.667	Homo_sapiens
ENSPSIG00000018258	TSR1	99	56.071	ENSAPOG00000020891	tsr1	87	55.890	Acanthochromis_polyacanthus
ENSPSIG00000018258	TSR1	100	68.156	ENSAMEG00000007599	TSR1	87	67.927	Ailuropoda_melanoleuca
ENSPSIG00000018258	TSR1	99	56.723	ENSACIG00000007090	tsr1	87	56.443	Amphilophus_citrinellus
ENSPSIG00000018258	TSR1	99	55.647	ENSAOCG00000023284	tsr1	86	56.389	Amphiprion_ocellaris
ENSPSIG00000018258	TSR1	99	55.785	ENSAPEG00000008452	tsr1	93	56.528	Amphiprion_percula
ENSPSIG00000018258	TSR1	99	55.041	ENSATEG00000021961	tsr1	87	56.540	Anabas_testudineus
ENSPSIG00000018258	TSR1	100	76.056	ENSAPLG00000013422	TSR1	96	76.869	Anas_platyrhynchos
ENSPSIG00000018258	TSR1	70	62.970	ENSACAG00000000859	TSR1	81	62.574	Anolis_carolinensis
ENSPSIG00000018258	TSR1	98	69.472	ENSANAG00000031071	TSR1	86	69.472	Aotus_nancymaae
ENSPSIG00000018258	TSR1	99	55.433	ENSACLG00000007595	tsr1	87	56.552	Astatotilapia_calliptera
ENSPSIG00000018258	TSR1	99	70.397	ENSBTAG00000004225	TSR1	87	69.645	Bos_taurus
ENSPSIG00000018258	TSR1	93	43.263	WBGene00006497	tag-151	80	42.836	Caenorhabditis_elegans
ENSPSIG00000018258	TSR1	98	69.109	ENSCJAG00000012456	TSR1	86	69.109	Callithrix_jacchus
ENSPSIG00000018258	TSR1	100	67.324	ENSCAFG00000002106	-	88	66.291	Canis_familiaris
ENSPSIG00000018258	TSR1	93	69.289	ENSCAFG00000019273	-	100	68.182	Canis_familiaris
ENSPSIG00000018258	TSR1	100	67.465	ENSCAFG00020009728	TSR1	88	66.432	Canis_lupus_dingo
ENSPSIG00000018258	TSR1	100	69.676	ENSCHIG00000023935	TSR1	88	69.209	Capra_hircus
ENSPSIG00000018258	TSR1	100	68.785	ENSTSYG00000005468	TSR1	88	68.927	Carlito_syrichta
ENSPSIG00000018258	TSR1	92	68.567	ENSCPOG00000014833	TSR1	86	68.721	Cavia_porcellus
ENSPSIG00000018258	TSR1	92	68.615	ENSCCAG00000028962	TSR1	85	68.615	Cebus_capucinus
ENSPSIG00000018258	TSR1	100	68.310	ENSCATG00000044262	TSR1	88	68.028	Cercocebus_atys
ENSPSIG00000018258	TSR1	100	68.079	ENSCLAG00000005567	TSR1	88	68.118	Chinchilla_lanigera
ENSPSIG00000018258	TSR1	100	68.592	ENSCSAG00000013788	TSR1	88	68.310	Chlorocebus_sabaeus
ENSPSIG00000018258	TSR1	100	88.244	ENSCPBG00000020363	TSR1	85	87.960	Chrysemys_picta_bellii
ENSPSIG00000018258	TSR1	96	48.132	ENSCING00000020658	-	86	47.475	Ciona_intestinalis
ENSPSIG00000018258	TSR1	96	46.715	ENSCSAVG00000001875	-	85	46.715	Ciona_savignyi
ENSPSIG00000018258	TSR1	98	62.787	ENSCANG00000033056	TSR1	85	62.069	Colobus_angolensis_palliatus
ENSPSIG00000018258	TSR1	100	68.265	ENSCGRG00001023942	Tsr1	88	68.406	Cricetulus_griseus_chok1gshd
ENSPSIG00000018258	TSR1	99	53.709	ENSCSEG00000013009	tsr1	87	54.621	Cynoglossus_semilaevis
ENSPSIG00000018258	TSR1	99	54.830	ENSCVAG00000000506	tsr1	87	55.679	Cyprinodon_variegatus
ENSPSIG00000018258	TSR1	99	54.672	ENSDARG00000007744	tsr1	87	54.951	Danio_rerio
ENSPSIG00000018258	TSR1	100	69.111	ENSDNOG00000004715	TSR1	100	70.219	Dasypus_novemcinctus
ENSPSIG00000018258	TSR1	91	63.807	ENSDORG00000023234	-	84	63.807	Dipodomys_ordii
ENSPSIG00000018258	TSR1	99	69.528	ENSDORG00000016371	-	87	69.242	Dipodomys_ordii
ENSPSIG00000018258	TSR1	94	45.760	FBgn0037073	Tsr1	82	45.322	Drosophila_melanogaster
ENSPSIG00000018258	TSR1	90	77.377	ENSETEG00000017534	TSR1	76	77.377	Echinops_telfairi
ENSPSIG00000018258	TSR1	97	53.120	ENSEBUG00000013731	TSR1	87	52.762	Eptatretus_burgeri
ENSPSIG00000018258	TSR1	100	69.676	ENSEASG00005009302	TSR1	85	68.927	Equus_asinus_asinus
ENSPSIG00000018258	TSR1	100	69.774	ENSECAG00000009114	TSR1	88	69.165	Equus_caballus
ENSPSIG00000018258	TSR1	100	54.856	ENSELUG00000020984	tsr1	84	54.993	Esox_lucius
ENSPSIG00000018258	TSR1	100	69.676	ENSFCAG00000006313	TSR1	88	68.785	Felis_catus
ENSPSIG00000018258	TSR1	100	76.761	ENSFALG00000006532	TSR1	87	77.324	Ficedula_albicollis
ENSPSIG00000018258	TSR1	100	68.458	ENSFDAG00000006038	TSR1	88	68.600	Fukomys_damarensis
ENSPSIG00000018258	TSR1	99	55.144	ENSFHEG00000003626	tsr1	87	55.890	Fundulus_heteroclitus
ENSPSIG00000018258	TSR1	99	54.114	ENSGMOG00000010336	tsr1	87	54.685	Gadus_morhua
ENSPSIG00000018258	TSR1	99	53.908	ENSGAFG00000012993	tsr1	89	55.220	Gambusia_affinis
ENSPSIG00000018258	TSR1	99	55.663	ENSGACG00000010843	tsr1	87	54.808	Gasterosteus_aculeatus
ENSPSIG00000018258	TSR1	100	88.385	ENSGAGG00000025619	-	88	88.102	Gopherus_agassizii
ENSPSIG00000018258	TSR1	98	69.242	ENSGGOG00000001704	TSR1	86	68.956	Gorilla_gorilla
ENSPSIG00000018258	TSR1	99	55.586	ENSHBUG00000017904	tsr1	94	56.731	Haplochromis_burtoni
ENSPSIG00000018258	TSR1	100	68.503	ENSHGLG00000012806	-	88	68.362	Heterocephalus_glaber_female
ENSPSIG00000018258	TSR1	100	60.057	ENSHGLG00000015688	-	89	59.773	Heterocephalus_glaber_female
ENSPSIG00000018258	TSR1	100	68.503	ENSHGLG00100015392	TSR1	88	68.362	Heterocephalus_glaber_male
ENSPSIG00000018258	TSR1	99	57.103	ENSHCOG00000001432	tsr1	86	56.841	Hippocampus_comes
ENSPSIG00000018258	TSR1	99	55.252	ENSIPUG00000004618	tsr1	87	55.389	Ictalurus_punctatus
ENSPSIG00000018258	TSR1	100	68.547	ENSSTOG00000011819	TSR1	88	68.644	Ictidomys_tridecemlineatus
ENSPSIG00000018258	TSR1	100	63.521	ENSJJAG00000019505	Tsr1	91	63.239	Jaculus_jaculus
ENSPSIG00000018258	TSR1	99	56.044	ENSKMAG00000005763	tsr1	87	56.414	Kryptolebias_marmoratus
ENSPSIG00000018258	TSR1	99	53.625	ENSLBEG00000021823	tsr1	87	54.595	Labrus_bergylta
ENSPSIG00000018258	TSR1	100	67.083	ENSLACG00000002197	TSR1	87	67.038	Latimeria_chalumnae
ENSPSIG00000018258	TSR1	94	57.675	ENSLOCG00000006491	TSR1	88	57.463	Lepisosteus_oculatus
ENSPSIG00000018258	TSR1	100	68.451	ENSMFAG00000021330	TSR1	88	68.169	Macaca_fascicularis
ENSPSIG00000018258	TSR1	100	68.169	ENSMMUG00000017519	TSR1	88	67.887	Macaca_mulatta
ENSPSIG00000018258	TSR1	100	68.169	ENSMNEG00000031382	TSR1	88	67.887	Macaca_nemestrina
ENSPSIG00000018258	TSR1	100	68.310	ENSMLEG00000036733	TSR1	88	68.028	Mandrillus_leucophaeus
ENSPSIG00000018258	TSR1	99	54.839	ENSMAMG00000017918	tsr1	87	55.707	Mastacembelus_armatus
ENSPSIG00000018258	TSR1	99	55.055	ENSMZEG00005007477	tsr1	87	56.061	Maylandia_zebra
ENSPSIG00000018258	TSR1	100	77.465	ENSMGAG00000005576	TSR1	88	77.465	Meleagris_gallopavo
ENSPSIG00000018258	TSR1	100	70.381	ENSMICG00000012943	TSR1	88	69.774	Microcebus_murinus
ENSPSIG00000018258	TSR1	100	68.406	ENSMOCG00000022764	Tsr1	88	68.547	Microtus_ochrogaster
ENSPSIG00000018258	TSR1	99	55.694	ENSMMOG00000014280	tsr1	87	56.128	Mola_mola
ENSPSIG00000018258	TSR1	96	71.072	ENSMODG00000010658	TSR1	84	70.778	Monodelphis_domestica
ENSPSIG00000018258	TSR1	99	55.677	ENSMALG00000011681	tsr1	87	56.224	Monopterus_albus
ENSPSIG00000018258	TSR1	100	68.079	MGP_CAROLIEiJ_G0016727	Tsr1	88	68.362	Mus_caroli
ENSPSIG00000018258	TSR1	100	68.785	ENSMUSG00000038335	Tsr1	88	68.785	Mus_musculus
ENSPSIG00000018258	TSR1	100	68.503	MGP_PahariEiJ_G0017864	Tsr1	88	68.785	Mus_pahari
ENSPSIG00000018258	TSR1	100	68.644	MGP_SPRETEiJ_G0017570	Tsr1	88	68.644	Mus_spretus
ENSPSIG00000018258	TSR1	93	71.212	ENSMPUG00000013000	TSR1	100	69.954	Mustela_putorius_furo
ENSPSIG00000018258	TSR1	98	70.487	ENSMLUG00000003505	TSR1	86	69.727	Myotis_lucifugus
ENSPSIG00000018258	TSR1	99	55.918	ENSNBRG00000020728	tsr1	87	57.221	Neolamprologus_brichardi
ENSPSIG00000018258	TSR1	98	66.857	ENSMEUG00000015828	TSR1	86	67.521	Notamacropus_eugenii
ENSPSIG00000018258	TSR1	99	56.241	ENSONIG00000013131	tsr1	87	56.708	Oreochromis_niloticus
ENSPSIG00000018258	TSR1	98	70.201	ENSOCUG00000014256	TSR1	86	70.014	Oryctolagus_cuniculus
ENSPSIG00000018258	TSR1	98	55.850	ENSORLG00000004926	tsr1	84	56.761	Oryzias_latipes
ENSPSIG00000018258	TSR1	98	56.067	ENSORLG00020008792	tsr1	84	56.841	Oryzias_latipes_hni
ENSPSIG00000018258	TSR1	98	55.850	ENSORLG00015013838	tsr1	84	56.761	Oryzias_latipes_hsok
ENSPSIG00000018258	TSR1	98	55.915	ENSOMEG00000004830	tsr1	84	58.310	Oryzias_melastigma
ENSPSIG00000018258	TSR1	100	68.671	ENSOGAG00000004492	TSR1	88	68.811	Otolemur_garnettii
ENSPSIG00000018258	TSR1	100	69.817	ENSOARG00000015437	TSR1	85	69.068	Ovis_aries
ENSPSIG00000018258	TSR1	98	69.385	ENSPPAG00000036355	TSR1	86	69.099	Pan_paniscus
ENSPSIG00000018258	TSR1	100	69.394	ENSPPRG00000015519	-	88	68.503	Panthera_pardus
ENSPSIG00000018258	TSR1	100	69.394	ENSPTIG00000010608	TSR1	88	68.503	Panthera_tigris_altaica
ENSPSIG00000018258	TSR1	98	69.385	ENSPTRG00000008547	TSR1	86	69.099	Pan_troglodytes
ENSPSIG00000018258	TSR1	100	64.930	ENSPANG00000024463	TSR1	87	65.070	Papio_anubis
ENSPSIG00000018258	TSR1	99	57.343	ENSPKIG00000013972	tsr1	86	56.540	Paramormyrops_kingsleyae
ENSPSIG00000018258	TSR1	99	57.872	ENSPMGG00000011577	tsr1	85	57.977	Periophthalmus_magnuspinnatus
ENSPSIG00000018258	TSR1	99	68.670	ENSPEMG00000018033	Tsr1	87	68.813	Peromyscus_maniculatus_bairdii
ENSPSIG00000018258	TSR1	98	69.814	ENSPCIG00000009357	TSR1	86	68.724	Phascolarctos_cinereus
ENSPSIG00000018258	TSR1	99	54.633	ENSPFOG00000004483	TSR1	87	56.033	Poecilia_formosa
ENSPSIG00000018258	TSR1	99	54.533	ENSPLAG00000022320	tsr1	87	55.130	Poecilia_latipinna
ENSPSIG00000018258	TSR1	99	54.434	ENSPMEG00000004577	tsr1	87	55.450	Poecilia_mexicana
ENSPSIG00000018258	TSR1	97	54.584	ENSPREG00000010354	tsr1	83	55.446	Poecilia_reticulata
ENSPSIG00000018258	TSR1	98	63.481	ENSPPYG00000007792	TSR1	87	63.195	Pongo_abelii
ENSPSIG00000018258	TSR1	100	69.676	ENSPCOG00000017928	TSR1	88	68.644	Propithecus_coquereli
ENSPSIG00000018258	TSR1	99	68.839	ENSPVAG00000002162	TSR1	87	68.369	Pteropus_vampyrus
ENSPSIG00000018258	TSR1	99	55.571	ENSPNYG00000016163	tsr1	87	56.690	Pundamilia_nyererei
ENSPSIG00000018258	TSR1	99	55.177	ENSPNAG00000008659	tsr1	87	55.450	Pygocentrus_nattereri
ENSPSIG00000018258	TSR1	100	68.970	ENSRNOG00000002980	Tsr1	88	69.252	Rattus_norvegicus
ENSPSIG00000018258	TSR1	100	68.592	ENSRBIG00000040016	TSR1	88	68.592	Rhinopithecus_bieti
ENSPSIG00000018258	TSR1	100	68.451	ENSRROG00000030361	TSR1	89	68.451	Rhinopithecus_roxellana
ENSPSIG00000018258	TSR1	92	32.296	YDL060W	-	82	31.278	Saccharomyces_cerevisiae
ENSPSIG00000018258	TSR1	98	69.187	ENSSBOG00000020785	TSR1	86	69.187	Saimiri_boliviensis_boliviensis
ENSPSIG00000018258	TSR1	100	69.101	ENSSHAG00000011394	TSR1	88	69.565	Sarcophilus_harrisii
ENSPSIG00000018258	TSR1	99	56.206	ENSSFOG00015005455	tsr1	86	55.961	Scleropages_formosus
ENSPSIG00000018258	TSR1	99	54.632	ENSSMAG00000009504	tsr1	87	55.068	Scophthalmus_maximus
ENSPSIG00000018258	TSR1	99	56.054	ENSSDUG00000012074	tsr1	87	57.279	Seriola_dumerili
ENSPSIG00000018258	TSR1	99	56.250	ENSSLDG00000002031	tsr1	87	57.045	Seriola_lalandi_dorsalis
ENSPSIG00000018258	TSR1	100	57.709	ENSSARG00000000759	TSR1	88	57.709	Sorex_araneus
ENSPSIG00000018258	TSR1	99	76.901	ENSSPUG00000007042	TSR1	87	77.183	Sphenodon_punctatus
ENSPSIG00000018258	TSR1	99	56.138	ENSSPAG00000021951	tsr1	86	56.690	Stegastes_partitus
ENSPSIG00000018258	TSR1	100	69.111	ENSSSCG00000038534	TSR1	88	68.644	Sus_scrofa
ENSPSIG00000018258	TSR1	98	78.940	ENSTGUG00000005883	TSR1	96	78.910	Taeniopygia_guttata
ENSPSIG00000018258	TSR1	99	57.103	ENSTRUG00000004665	tsr1	86	57.343	Takifugu_rubripes
ENSPSIG00000018258	TSR1	99	57.223	ENSTNIG00000016196	tsr1	87	57.083	Tetraodon_nigroviridis
ENSPSIG00000018258	TSR1	63	83.077	ENSTBEG00000015275	-	55	83.077	Tupaia_belangeri
ENSPSIG00000018258	TSR1	100	68.547	ENSTTRG00000001177	TSR1	88	67.938	Tursiops_truncatus
ENSPSIG00000018258	TSR1	100	68.547	ENSUAMG00000025160	TSR1	87	67.468	Ursus_americanus
ENSPSIG00000018258	TSR1	100	68.265	ENSUMAG00000009294	TSR1	89	67.373	Ursus_maritimus
ENSPSIG00000018258	TSR1	81	63.085	ENSVPAG00000000228	TSR1	85	62.326	Vicugna_pacos
ENSPSIG00000018258	TSR1	100	66.761	ENSVVUG00000021767	TSR1	88	65.726	Vulpes_vulpes
ENSPSIG00000018258	TSR1	99	59.467	ENSXETG00000023797	tsr1	95	59.021	Xenopus_tropicalis
ENSPSIG00000018258	TSR1	99	56.250	ENSXCOG00000009635	tsr1	87	56.825	Xiphophorus_couchianus
ENSPSIG00000018258	TSR1	99	55.281	ENSXMAG00000001397	tsr1	84	55.923	Xiphophorus_maculatus