EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000000744 (Gene tree)
Gene ID: 102957830
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 40720 bases
Position: chrKE721582.1:6383206-6423925
Accession: 102957830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000000445	SRP54	PF00448.22	4.2e-78	1	1
ENSPTIP00000000445	SRP54_N	PF02881.19	1.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000001222	SRP54-201	3705	XM_007073736	ENSPTIP00000000445	526 (aa)	XP_007073798	UPI000298AEB8

Gene Model

Click here to download ENSPTIG00000000744's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000000744's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000000744	SRP54	96	99.802	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSPTIG00000000744	SRP54	96	95.635	ENSAPOG00000011314	srp54	100	95.635	Acanthochromis_polyacanthus
ENSPTIG00000000744	SRP54	96	99.802	ENSAMEG00000015544	SRP54	100	99.802	Ailuropoda_melanoleuca
ENSPTIG00000000744	SRP54	85	94.878	ENSACIG00000022831	srp54	97	94.878	Amphilophus_citrinellus
ENSPTIG00000000744	SRP54	96	95.635	ENSAOCG00000019401	srp54	100	95.635	Amphiprion_ocellaris
ENSPTIG00000000744	SRP54	96	95.635	ENSAPEG00000001977	srp54	100	95.635	Amphiprion_percula
ENSPTIG00000000744	SRP54	96	96.032	ENSATEG00000013877	srp54	100	96.032	Anabas_testudineus
ENSPTIG00000000744	SRP54	90	98.523	ENSAPLG00000010125	SRP54	95	98.523	Anas_platyrhynchos
ENSPTIG00000000744	SRP54	96	98.413	ENSACAG00000002103	-	100	98.413	Anolis_carolinensis
ENSPTIG00000000744	SRP54	83	95.392	ENSACAG00000010631	-	100	95.392	Anolis_carolinensis
ENSPTIG00000000744	SRP54	62	81.873	ENSACAG00000001124	-	100	81.873	Anolis_carolinensis
ENSPTIG00000000744	SRP54	96	99.802	ENSANAG00000022133	SRP54	100	99.802	Aotus_nancymaae
ENSPTIG00000000744	SRP54	96	95.833	ENSACLG00000015866	srp54	100	95.833	Astatotilapia_calliptera
ENSPTIG00000000744	SRP54	96	95.833	ENSAMXG00000032669	SRP54	100	95.833	Astyanax_mexicanus
ENSPTIG00000000744	SRP54	96	99.802	ENSBTAG00000019085	SRP54	100	99.802	Bos_taurus
ENSPTIG00000000744	SRP54	94	71.486	WBGene00009012	F21D5.7	100	71.486	Caenorhabditis_elegans
ENSPTIG00000000744	SRP54	96	99.802	ENSCJAG00000006581	SRP54	100	99.802	Callithrix_jacchus
ENSPTIG00000000744	SRP54	96	99.802	ENSCAFG00000013331	SRP54	100	99.802	Canis_familiaris
ENSPTIG00000000744	SRP54	96	99.802	ENSCAFG00020023427	SRP54	100	99.802	Canis_lupus_dingo
ENSPTIG00000000744	SRP54	96	99.802	ENSCHIG00000026345	SRP54	100	99.802	Capra_hircus
ENSPTIG00000000744	SRP54	96	99.603	ENSTSYG00000002680	-	100	99.603	Carlito_syrichta
ENSPTIG00000000744	SRP54	90	88.421	ENSTSYG00000035333	-	93	88.421	Carlito_syrichta
ENSPTIG00000000744	SRP54	90	64.082	ENSCAPG00000008780	SRP54	100	64.082	Cavia_aperea
ENSPTIG00000000744	SRP54	96	99.405	ENSCPOG00000003691	SRP54	100	99.405	Cavia_porcellus
ENSPTIG00000000744	SRP54	86	99.524	ENSCCAG00000024179	SRP54	100	99.761	Cebus_capucinus
ENSPTIG00000000744	SRP54	96	99.802	ENSCATG00000034083	SRP54	100	99.802	Cercocebus_atys
ENSPTIG00000000744	SRP54	96	99.802	ENSCLAG00000015076	SRP54	100	99.802	Chinchilla_lanigera
ENSPTIG00000000744	SRP54	96	99.802	ENSCSAG00000015575	SRP54	100	99.802	Chlorocebus_sabaeus
ENSPTIG00000000744	SRP54	91	87.942	ENSCHOG00000008986	SRP54	100	87.942	Choloepus_hoffmanni
ENSPTIG00000000744	SRP54	96	99.008	ENSCPBG00000026195	SRP54	100	99.008	Chrysemys_picta_bellii
ENSPTIG00000000744	SRP54	96	81.548	ENSCING00000007380	-	100	81.548	Ciona_intestinalis
ENSPTIG00000000744	SRP54	96	99.802	ENSCANG00000028532	SRP54	100	99.802	Colobus_angolensis_palliatus
ENSPTIG00000000744	SRP54	96	99.802	ENSCGRG00001009525	-	100	99.802	Cricetulus_griseus_chok1gshd
ENSPTIG00000000744	SRP54	73	99.740	ENSCGRG00000009453	-	89	99.740	Cricetulus_griseus_crigri
ENSPTIG00000000744	SRP54	96	94.841	ENSCSEG00000012392	srp54	100	94.841	Cynoglossus_semilaevis
ENSPTIG00000000744	SRP54	96	95.635	ENSCVAG00000010395	srp54	100	95.635	Cyprinodon_variegatus
ENSPTIG00000000744	SRP54	96	95.833	ENSDARG00000098367	srp54	100	95.833	Danio_rerio
ENSPTIG00000000744	SRP54	96	99.802	ENSDNOG00000032525	SRP54	100	99.802	Dasypus_novemcinctus
ENSPTIG00000000744	SRP54	85	85.268	ENSDORG00000005159	-	97	85.268	Dipodomys_ordii
ENSPTIG00000000744	SRP54	92	77.732	FBgn0010747	Srp54k	98	77.309	Drosophila_melanogaster
ENSPTIG00000000744	SRP54	96	99.008	ENSETEG00000016307	-	100	99.008	Echinops_telfairi
ENSPTIG00000000744	SRP54	79	58.134	ENSETEG00000012102	-	99	58.134	Echinops_telfairi
ENSPTIG00000000744	SRP54	96	87.698	ENSEBUG00000009437	-	100	87.698	Eptatretus_burgeri
ENSPTIG00000000744	SRP54	96	99.802	ENSEASG00005002057	SRP54	100	99.802	Equus_asinus_asinus
ENSPTIG00000000744	SRP54	95	99.598	ENSECAG00000018042	SRP54	98	99.598	Equus_caballus
ENSPTIG00000000744	SRP54	96	83.135	ENSEEUG00000001511	SRP54	100	83.135	Erinaceus_europaeus
ENSPTIG00000000744	SRP54	96	95.040	ENSELUG00000003395	srp54	100	95.040	Esox_lucius
ENSPTIG00000000744	SRP54	96	100.000	ENSFCAG00000032033	SRP54	100	100.000	Felis_catus
ENSPTIG00000000744	SRP54	96	98.611	ENSFALG00000005995	SRP54	100	98.611	Ficedula_albicollis
ENSPTIG00000000744	SRP54	96	99.802	ENSFDAG00000016767	SRP54	100	99.802	Fukomys_damarensis
ENSPTIG00000000744	SRP54	96	95.238	ENSFHEG00000004263	srp54	100	95.238	Fundulus_heteroclitus
ENSPTIG00000000744	SRP54	91	89.958	ENSGMOG00000011391	srp54	100	89.958	Gadus_morhua
ENSPTIG00000000744	SRP54	96	98.611	ENSGALG00000023135	SRP54	100	98.611	Gallus_gallus
ENSPTIG00000000744	SRP54	96	95.833	ENSGAFG00000011586	srp54	100	95.833	Gambusia_affinis
ENSPTIG00000000744	SRP54	96	95.238	ENSGACG00000004181	srp54	100	95.238	Gasterosteus_aculeatus
ENSPTIG00000000744	SRP54	96	99.008	ENSGAGG00000014766	SRP54	100	99.008	Gopherus_agassizii
ENSPTIG00000000744	SRP54	96	99.802	ENSGGOG00000002926	SRP54	100	99.802	Gorilla_gorilla
ENSPTIG00000000744	SRP54	96	95.833	ENSHBUG00000005678	srp54	100	95.833	Haplochromis_burtoni
ENSPTIG00000000744	SRP54	96	99.802	ENSHGLG00000002850	SRP54	100	99.802	Heterocephalus_glaber_female
ENSPTIG00000000744	SRP54	96	99.802	ENSHGLG00100005263	SRP54	100	99.802	Heterocephalus_glaber_male
ENSPTIG00000000744	SRP54	96	68.911	ENSHGLG00100007281	-	100	68.911	Heterocephalus_glaber_male
ENSPTIG00000000744	SRP54	96	94.246	ENSHCOG00000021127	srp54	100	94.246	Hippocampus_comes
ENSPTIG00000000744	SRP54	96	95.040	ENSIPUG00000001420	srp54	100	95.040	Ictalurus_punctatus
ENSPTIG00000000744	SRP54	96	99.802	ENSSTOG00000016023	SRP54	100	99.802	Ictidomys_tridecemlineatus
ENSPTIG00000000744	SRP54	84	76.818	ENSJJAG00000016404	-	100	76.818	Jaculus_jaculus
ENSPTIG00000000744	SRP54	96	95.040	ENSJJAG00000013417	-	100	95.040	Jaculus_jaculus
ENSPTIG00000000744	SRP54	96	95.238	ENSKMAG00000007707	srp54	100	95.238	Kryptolebias_marmoratus
ENSPTIG00000000744	SRP54	96	95.635	ENSLBEG00000018690	srp54	100	95.635	Labrus_bergylta
ENSPTIG00000000744	SRP54	96	95.635	ENSLBEG00000021122	srp54	100	95.635	Labrus_bergylta
ENSPTIG00000000744	SRP54	96	95.833	ENSLACG00000017890	SRP54	100	95.833	Latimeria_chalumnae
ENSPTIG00000000744	SRP54	96	96.627	ENSLOCG00000009440	srp54	100	96.627	Lepisosteus_oculatus
ENSPTIG00000000744	SRP54	96	99.802	ENSLAFG00000012007	SRP54	100	99.802	Loxodonta_africana
ENSPTIG00000000744	SRP54	96	99.802	ENSMFAG00000044371	SRP54	100	99.802	Macaca_fascicularis
ENSPTIG00000000744	SRP54	96	99.802	ENSMMUG00000015073	FAM177A1	100	99.802	Macaca_mulatta
ENSPTIG00000000744	SRP54	96	99.802	ENSMNEG00000006947	SRP54	100	99.802	Macaca_nemestrina
ENSPTIG00000000744	SRP54	96	99.802	ENSMLEG00000042251	SRP54	100	99.802	Mandrillus_leucophaeus
ENSPTIG00000000744	SRP54	96	95.833	ENSMAMG00000004803	srp54	100	95.833	Mastacembelus_armatus
ENSPTIG00000000744	SRP54	96	95.833	ENSMZEG00005027528	srp54	100	95.833	Maylandia_zebra
ENSPTIG00000000744	SRP54	96	93.874	ENSMGAG00000012481	SRP54	100	93.874	Meleagris_gallopavo
ENSPTIG00000000744	SRP54	96	99.603	ENSMAUG00000014447	-	100	99.603	Mesocricetus_auratus
ENSPTIG00000000744	SRP54	96	99.802	ENSMICG00000010270	SRP54	100	99.802	Microcebus_murinus
ENSPTIG00000000744	SRP54	84	99.545	ENSMOCG00000000948	-	100	99.545	Microtus_ochrogaster
ENSPTIG00000000744	SRP54	85	93.960	ENSMMOG00000020303	srp54	98	93.960	Mola_mola
ENSPTIG00000000744	SRP54	96	99.603	ENSMODG00000023150	-	100	99.603	Monodelphis_domestica
ENSPTIG00000000744	SRP54	96	99.603	ENSMODG00000012925	-	100	99.603	Monodelphis_domestica
ENSPTIG00000000744	SRP54	85	94.420	ENSMALG00000009163	srp54	99	94.420	Monopterus_albus
ENSPTIG00000000744	SRP54	96	99.603	MGP_CAROLIEiJ_G0017754	-	100	99.603	Mus_caroli
ENSPTIG00000000744	SRP54	96	98.810	ENSMUSG00000079108	Srp54c	100	98.810	Mus_musculus
ENSPTIG00000000744	SRP54	96	99.603	ENSMUSG00000112449	Srp54b	100	99.603	Mus_musculus
ENSPTIG00000000744	SRP54	96	99.603	ENSMUSG00000073079	Srp54a	100	100.000	Mus_musculus
ENSPTIG00000000744	SRP54	96	99.603	MGP_PahariEiJ_G0029510	-	100	99.603	Mus_pahari
ENSPTIG00000000744	SRP54	96	99.802	ENSMPUG00000016302	SRP54	100	99.802	Mustela_putorius_furo
ENSPTIG00000000744	SRP54	96	99.206	ENSMLUG00000008958	SRP54	100	99.206	Myotis_lucifugus
ENSPTIG00000000744	SRP54	96	89.881	ENSNGAG00000019806	-	100	89.881	Nannospalax_galili
ENSPTIG00000000744	SRP54	84	95.455	ENSNBRG00000006000	srp54	100	95.455	Neolamprologus_brichardi
ENSPTIG00000000744	SRP54	96	99.802	ENSNLEG00000003496	SRP54	100	99.802	Nomascus_leucogenys
ENSPTIG00000000744	SRP54	64	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSPTIG00000000744	SRP54	55	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSPTIG00000000744	SRP54	96	99.802	ENSODEG00000004865	SRP54	100	99.802	Octodon_degus
ENSPTIG00000000744	SRP54	96	95.833	ENSONIG00000011768	srp54	100	95.833	Oreochromis_niloticus
ENSPTIG00000000744	SRP54	96	99.802	ENSOANG00000014051	SRP54	100	99.802	Ornithorhynchus_anatinus
ENSPTIG00000000744	SRP54	96	99.206	ENSOCUG00000007838	SRP54	100	99.206	Oryctolagus_cuniculus
ENSPTIG00000000744	SRP54	96	95.635	ENSORLG00000010027	srp54	100	95.635	Oryzias_latipes
ENSPTIG00000000744	SRP54	96	95.635	ENSORLG00020001878	srp54	100	95.635	Oryzias_latipes_hni
ENSPTIG00000000744	SRP54	96	95.635	ENSORLG00015021866	srp54	100	95.635	Oryzias_latipes_hsok
ENSPTIG00000000744	SRP54	96	95.833	ENSOMEG00000020952	srp54	100	95.833	Oryzias_melastigma
ENSPTIG00000000744	SRP54	96	99.802	ENSOGAG00000012188	SRP54	100	99.802	Otolemur_garnettii
ENSPTIG00000000744	SRP54	96	99.802	ENSOARG00000007160	SRP54	100	99.802	Ovis_aries
ENSPTIG00000000744	SRP54	96	99.802	ENSPPAG00000017434	SRP54	100	99.802	Pan_paniscus
ENSPTIG00000000744	SRP54	96	99.008	ENSPPRG00000014047	SRP54	100	99.008	Panthera_pardus
ENSPTIG00000000744	SRP54	96	99.802	ENSPTRG00000006259	FAM177A1	100	99.802	Pan_troglodytes
ENSPTIG00000000744	SRP54	96	99.802	ENSPANG00000023853	SRP54	100	99.802	Papio_anubis
ENSPTIG00000000744	SRP54	96	95.437	ENSPKIG00000001953	srp54	100	95.437	Paramormyrops_kingsleyae
ENSPTIG00000000744	SRP54	96	98.810	ENSPSIG00000006476	SRP54	100	98.810	Pelodiscus_sinensis
ENSPTIG00000000744	SRP54	87	92.826	ENSPMGG00000004127	srp54	99	92.826	Periophthalmus_magnuspinnatus
ENSPTIG00000000744	SRP54	96	86.706	ENSPEMG00000019634	-	100	86.706	Peromyscus_maniculatus_bairdii
ENSPTIG00000000744	SRP54	96	88.889	ENSPMAG00000006078	-	100	88.889	Petromyzon_marinus
ENSPTIG00000000744	SRP54	96	99.603	ENSPCIG00000016175	SRP54	100	99.603	Phascolarctos_cinereus
ENSPTIG00000000744	SRP54	96	95.833	ENSPFOG00000008870	srp54	100	95.833	Poecilia_formosa
ENSPTIG00000000744	SRP54	96	95.833	ENSPLAG00000009889	srp54	100	95.833	Poecilia_latipinna
ENSPTIG00000000744	SRP54	96	95.833	ENSPMEG00000008601	srp54	100	95.833	Poecilia_mexicana
ENSPTIG00000000744	SRP54	96	95.833	ENSPREG00000004505	srp54	100	95.833	Poecilia_reticulata
ENSPTIG00000000744	SRP54	96	94.643	ENSPPYG00000005739	SRP54	100	94.643	Pongo_abelii
ENSPTIG00000000744	SRP54	96	95.833	ENSPCAG00000006268	SRP54	100	95.833	Procavia_capensis
ENSPTIG00000000744	SRP54	96	97.822	ENSPCOG00000022473	SRP54	100	97.822	Propithecus_coquereli
ENSPTIG00000000744	SRP54	60	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSPTIG00000000744	SRP54	96	95.833	ENSPNYG00000009717	srp54	100	95.833	Pundamilia_nyererei
ENSPTIG00000000744	SRP54	96	95.635	ENSPNAG00000008544	srp54	100	95.635	Pygocentrus_nattereri
ENSPTIG00000000744	SRP54	96	99.405	ENSRNOG00000032776	Srp54a	100	99.405	Rattus_norvegicus
ENSPTIG00000000744	SRP54	96	99.802	ENSRROG00000041292	SRP54	100	99.802	Rhinopithecus_roxellana
ENSPTIG00000000744	SRP54	82	53.061	YPR088C	SRP54	95	48.276	Saccharomyces_cerevisiae
ENSPTIG00000000744	SRP54	90	99.789	ENSSBOG00000035145	SRP54	100	99.789	Saimiri_boliviensis_boliviensis
ENSPTIG00000000744	SRP54	65	99.708	ENSSHAG00000000671	SRP54	100	99.708	Sarcophilus_harrisii
ENSPTIG00000000744	SRP54	96	96.032	ENSSFOG00015013920	srp54	100	96.032	Scleropages_formosus
ENSPTIG00000000744	SRP54	96	89.700	ENSSMAG00000002441	srp54	100	89.700	Scophthalmus_maximus
ENSPTIG00000000744	SRP54	96	95.833	ENSSDUG00000018586	srp54	100	95.833	Seriola_dumerili
ENSPTIG00000000744	SRP54	96	95.635	ENSSLDG00000010476	srp54	100	95.635	Seriola_lalandi_dorsalis
ENSPTIG00000000744	SRP54	96	99.802	ENSSARG00000002744	SRP54	100	99.802	Sorex_araneus
ENSPTIG00000000744	SRP54	96	99.008	ENSSPUG00000013101	SRP54	100	99.008	Sphenodon_punctatus
ENSPTIG00000000744	SRP54	96	95.635	ENSSPAG00000002354	srp54	100	95.635	Stegastes_partitus
ENSPTIG00000000744	SRP54	96	99.802	ENSSSCG00000001955	SRP54	100	99.802	Sus_scrofa
ENSPTIG00000000744	SRP54	90	98.523	ENSTGUG00000011945	-	95	98.523	Taeniopygia_guttata
ENSPTIG00000000744	SRP54	96	95.238	ENSTRUG00000007057	srp54	100	95.238	Takifugu_rubripes
ENSPTIG00000000744	SRP54	96	94.841	ENSTNIG00000002589	srp54	100	94.841	Tetraodon_nigroviridis
ENSPTIG00000000744	SRP54	85	91.275	ENSTBEG00000011409	SRP54	100	91.275	Tupaia_belangeri
ENSPTIG00000000744	SRP54	96	89.881	ENSTTRG00000000928	SRP54	100	89.881	Tursiops_truncatus
ENSPTIG00000000744	SRP54	50	99.618	ENSUAMG00000012385	SRP54	100	99.618	Ursus_americanus
ENSPTIG00000000744	SRP54	96	99.802	ENSUMAG00000011234	SRP54	100	99.802	Ursus_maritimus
ENSPTIG00000000744	SRP54	90	99.578	ENSVPAG00000005668	SRP54	100	99.578	Vicugna_pacos
ENSPTIG00000000744	SRP54	96	99.802	ENSVVUG00000019962	SRP54	100	99.802	Vulpes_vulpes
ENSPTIG00000000744	SRP54	96	82.051	ENSXETG00000012290	srp54	100	82.051	Xenopus_tropicalis
ENSPTIG00000000744	SRP54	84	95.711	ENSXCOG00000004658	srp54	96	95.711	Xiphophorus_couchianus
ENSPTIG00000000744	SRP54	96	95.833	ENSXMAG00000018315	srp54	100	95.833	Xiphophorus_maculatus