EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000000844 (Gene tree)
Gene ID: 102962728
Gene Symbol: SF3A1
Alias: -
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 17043 bases
Position: chrKE721765.1:4541522-4558564
Accession: 102962728
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000000354	PRP21_like_P	PF12230.8	8.8e-52	1	1
ENSPTIP00000000354	Surp	PF01805.20	5.8e-46	1	2
ENSPTIP00000000354	Surp	PF01805.20	5.8e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000000988	SF3A1-201	2707	XM_007082605	ENSPTIP00000000354	772 (aa)	XP_007082667	-

Gene Model

Click here to download ENSPTIG00000000844's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000000844's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000000844	SF3A1	100	98.705	ENSG00000099995	SF3A1	97	98.705	Homo_sapiens
ENSPTIG00000000844	SF3A1	99	85.359	ENSAPOG00000020465	sf3a1	99	85.161	Acanthochromis_polyacanthus
ENSPTIG00000000844	SF3A1	100	99.611	ENSAMEG00000007737	SF3A1	97	99.611	Ailuropoda_melanoleuca
ENSPTIG00000000844	SF3A1	99	85.548	ENSACIG00000020672	sf3a1	98	85.547	Amphilophus_citrinellus
ENSPTIG00000000844	SF3A1	99	84.645	ENSAOCG00000003060	sf3a1	99	85.161	Amphiprion_ocellaris
ENSPTIG00000000844	SF3A1	99	84.774	ENSAPEG00000010735	sf3a1	99	85.290	Amphiprion_percula
ENSPTIG00000000844	SF3A1	99	85.677	ENSATEG00000021201	sf3a1	98	85.161	Anabas_testudineus
ENSPTIG00000000844	SF3A1	98	94.055	ENSAPLG00000009057	SF3A1	99	93.506	Anas_platyrhynchos
ENSPTIG00000000844	SF3A1	99	87.229	ENSACAG00000009415	SF3A1	97	88.310	Anolis_carolinensis
ENSPTIG00000000844	SF3A1	100	98.964	ENSANAG00000032045	SF3A1	97	98.964	Aotus_nancymaae
ENSPTIG00000000844	SF3A1	99	85.788	ENSACLG00000012622	sf3a1	99	85.659	Astatotilapia_calliptera
ENSPTIG00000000844	SF3A1	99	84.735	ENSAMXG00000005382	sf3a1	98	84.864	Astyanax_mexicanus
ENSPTIG00000000844	SF3A1	100	99.352	ENSBTAG00000003390	SF3A1	97	99.352	Bos_taurus
ENSPTIG00000000844	SF3A1	87	43.268	WBGene00004188	prp-21	90	44.677	Caenorhabditis_elegans
ENSPTIG00000000844	SF3A1	100	99.093	ENSCJAG00000010370	SF3A1	97	99.093	Callithrix_jacchus
ENSPTIG00000000844	SF3A1	100	99.611	ENSCAFG00000012559	SF3A1	97	99.611	Canis_familiaris
ENSPTIG00000000844	SF3A1	100	99.611	ENSCAFG00020000838	SF3A1	97	99.611	Canis_lupus_dingo
ENSPTIG00000000844	SF3A1	100	99.223	ENSCHIG00000018642	SF3A1	97	99.223	Capra_hircus
ENSPTIG00000000844	SF3A1	100	99.223	ENSTSYG00000004739	SF3A1	97	99.223	Carlito_syrichta
ENSPTIG00000000844	SF3A1	97	81.308	ENSCAPG00000015414	SF3A1	98	81.308	Cavia_aperea
ENSPTIG00000000844	SF3A1	100	99.093	ENSCPOG00000014589	SF3A1	97	99.093	Cavia_porcellus
ENSPTIG00000000844	SF3A1	100	98.964	ENSCCAG00000032006	SF3A1	97	98.964	Cebus_capucinus
ENSPTIG00000000844	SF3A1	100	98.964	ENSCATG00000029241	SF3A1	97	98.964	Cercocebus_atys
ENSPTIG00000000844	SF3A1	100	98.446	ENSCLAG00000006508	SF3A1	97	98.446	Chinchilla_lanigera
ENSPTIG00000000844	SF3A1	100	98.834	ENSCSAG00000009470	SF3A1	97	98.834	Chlorocebus_sabaeus
ENSPTIG00000000844	SF3A1	63	99.262	ENSCHOG00000005201	SF3A1	69	99.262	Choloepus_hoffmanni
ENSPTIG00000000844	SF3A1	99	92.418	ENSCPBG00000007595	SF3A1	97	92.198	Chrysemys_picta_bellii
ENSPTIG00000000844	SF3A1	97	51.984	ENSCING00000008526	-	66	58.046	Ciona_intestinalis
ENSPTIG00000000844	SF3A1	99	51.355	ENSCSAVG00000005608	-	92	61.017	Ciona_savignyi
ENSPTIG00000000844	SF3A1	100	98.834	ENSCANG00000033564	SF3A1	97	98.834	Colobus_angolensis_palliatus
ENSPTIG00000000844	SF3A1	100	98.316	ENSCGRG00001008933	Sf3a1	97	98.316	Cricetulus_griseus_chok1gshd
ENSPTIG00000000844	SF3A1	100	98.316	ENSCGRG00000006127	Sf3a1	97	98.316	Cricetulus_griseus_crigri
ENSPTIG00000000844	SF3A1	99	82.687	ENSCSEG00000010792	sf3a1	98	82.835	Cynoglossus_semilaevis
ENSPTIG00000000844	SF3A1	99	84.115	ENSCVAG00000004560	sf3a1	98	83.854	Cyprinodon_variegatus
ENSPTIG00000000844	SF3A1	99	84.224	ENSDARG00000041887	sf3a1	97	84.615	Danio_rerio
ENSPTIG00000000844	SF3A1	100	99.096	ENSDNOG00000010629	SF3A1	97	99.096	Dasypus_novemcinctus
ENSPTIG00000000844	SF3A1	100	99.223	ENSDORG00000005613	Sf3a1	97	99.223	Dipodomys_ordii
ENSPTIG00000000844	SF3A1	81	61.278	FBgn0266917	Sf3a1	85	59.279	Drosophila_melanogaster
ENSPTIG00000000844	SF3A1	87	98.054	ENSETEG00000017194	SF3A1	95	98.054	Echinops_telfairi
ENSPTIG00000000844	SF3A1	99	66.300	ENSEBUG00000001285	sf3a1	96	67.160	Eptatretus_burgeri
ENSPTIG00000000844	SF3A1	100	99.352	ENSEASG00005010254	SF3A1	97	99.352	Equus_asinus_asinus
ENSPTIG00000000844	SF3A1	100	99.352	ENSECAG00000023962	SF3A1	97	99.352	Equus_caballus
ENSPTIG00000000844	SF3A1	75	95.082	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSPTIG00000000844	SF3A1	99	83.854	ENSELUG00000022578	sf3a1	97	83.615	Esox_lucius
ENSPTIG00000000844	SF3A1	100	99.870	ENSFCAG00000011932	SF3A1	97	99.870	Felis_catus
ENSPTIG00000000844	SF3A1	98	92.989	ENSFALG00000006944	SF3A1	97	92.626	Ficedula_albicollis
ENSPTIG00000000844	SF3A1	100	98.964	ENSFDAG00000009560	SF3A1	97	98.964	Fukomys_damarensis
ENSPTIG00000000844	SF3A1	99	85.547	ENSFHEG00000010866	sf3a1	98	85.026	Fundulus_heteroclitus
ENSPTIG00000000844	SF3A1	99	82.723	ENSGMOG00000016024	sf3a1	97	81.193	Gadus_morhua
ENSPTIG00000000844	SF3A1	98	94.048	ENSGALG00000007937	SF3A1	97	93.402	Gallus_gallus
ENSPTIG00000000844	SF3A1	99	84.967	ENSGAFG00000009111	sf3a1	97	84.444	Gambusia_affinis
ENSPTIG00000000844	SF3A1	99	83.901	ENSGACG00000011893	sf3a1	97	83.246	Gasterosteus_aculeatus
ENSPTIG00000000844	SF3A1	95	93.033	ENSGAGG00000000762	SF3A1	97	92.391	Gopherus_agassizii
ENSPTIG00000000844	SF3A1	100	98.705	ENSGGOG00000012631	SF3A1	97	98.705	Gorilla_gorilla
ENSPTIG00000000844	SF3A1	99	85.788	ENSHBUG00000015795	sf3a1	99	85.659	Haplochromis_burtoni
ENSPTIG00000000844	SF3A1	100	99.223	ENSHGLG00000007907	SF3A1	97	99.223	Heterocephalus_glaber_female
ENSPTIG00000000844	SF3A1	100	99.223	ENSHGLG00100013799	SF3A1	97	99.223	Heterocephalus_glaber_male
ENSPTIG00000000844	SF3A1	100	81.266	ENSHCOG00000015423	sf3a1	99	80.491	Hippocampus_comes
ENSPTIG00000000844	SF3A1	99	82.422	ENSIPUG00000002470	sf3a1	98	82.682	Ictalurus_punctatus
ENSPTIG00000000844	SF3A1	100	99.352	ENSSTOG00000013892	SF3A1	97	99.352	Ictidomys_tridecemlineatus
ENSPTIG00000000844	SF3A1	100	99.223	ENSJJAG00000022566	Sf3a1	97	99.223	Jaculus_jaculus
ENSPTIG00000000844	SF3A1	99	84.375	ENSKMAG00000002400	sf3a1	98	84.505	Kryptolebias_marmoratus
ENSPTIG00000000844	SF3A1	100	83.333	ENSLBEG00000022974	sf3a1	98	83.333	Labrus_bergylta
ENSPTIG00000000844	SF3A1	99	88.411	ENSLACG00000003565	SF3A1	97	88.151	Latimeria_chalumnae
ENSPTIG00000000844	SF3A1	99	86.753	ENSLOCG00000008251	sf3a1	97	86.883	Lepisosteus_oculatus
ENSPTIG00000000844	SF3A1	100	98.575	ENSLAFG00000000448	SF3A1	97	98.575	Loxodonta_africana
ENSPTIG00000000844	SF3A1	99	62.211	ENSLAFG00000026032	-	97	62.339	Loxodonta_africana
ENSPTIG00000000844	SF3A1	100	98.705	ENSMFAG00000031979	SF3A1	97	98.705	Macaca_fascicularis
ENSPTIG00000000844	SF3A1	100	98.705	ENSMMUG00000005547	SF3A1	97	98.705	Macaca_mulatta
ENSPTIG00000000844	SF3A1	100	98.575	ENSMNEG00000037229	SF3A1	97	98.575	Macaca_nemestrina
ENSPTIG00000000844	SF3A1	100	98.834	ENSMLEG00000041908	SF3A1	97	98.834	Mandrillus_leucophaeus
ENSPTIG00000000844	SF3A1	99	85.511	ENSMAMG00000006460	sf3a1	97	85.640	Mastacembelus_armatus
ENSPTIG00000000844	SF3A1	99	85.788	ENSMZEG00005009633	sf3a1	99	85.659	Maylandia_zebra
ENSPTIG00000000844	SF3A1	98	94.048	ENSMGAG00000001330	SF3A1	99	93.498	Meleagris_gallopavo
ENSPTIG00000000844	SF3A1	95	94.809	ENSMAUG00000020317	Sf3a1	94	94.809	Mesocricetus_auratus
ENSPTIG00000000844	SF3A1	100	98.705	ENSMICG00000010038	SF3A1	97	98.705	Microcebus_murinus
ENSPTIG00000000844	SF3A1	100	98.446	ENSMOCG00000008438	Sf3a1	97	98.446	Microtus_ochrogaster
ENSPTIG00000000844	SF3A1	99	83.073	ENSMMOG00000015588	sf3a1	97	82.422	Mola_mola
ENSPTIG00000000844	SF3A1	100	97.927	ENSMODG00000009270	SF3A1	97	97.927	Monodelphis_domestica
ENSPTIG00000000844	SF3A1	99	86.126	ENSMALG00000000148	sf3a1	99	85.831	Monopterus_albus
ENSPTIG00000000844	SF3A1	100	98.187	MGP_CAROLIEiJ_G0016029	Sf3a1	97	98.187	Mus_caroli
ENSPTIG00000000844	SF3A1	100	98.187	ENSMUSG00000002129	Sf3a1	97	98.187	Mus_musculus
ENSPTIG00000000844	SF3A1	100	98.057	MGP_PahariEiJ_G0016862	Sf3a1	97	98.057	Mus_pahari
ENSPTIG00000000844	SF3A1	100	98.187	MGP_SPRETEiJ_G0016870	Sf3a1	97	98.187	Mus_spretus
ENSPTIG00000000844	SF3A1	100	99.482	ENSMPUG00000013144	SF3A1	97	99.482	Mustela_putorius_furo
ENSPTIG00000000844	SF3A1	100	99.352	ENSMLUG00000002139	SF3A1	97	99.352	Myotis_lucifugus
ENSPTIG00000000844	SF3A1	100	98.705	ENSNGAG00000016977	Sf3a1	97	98.705	Nannospalax_galili
ENSPTIG00000000844	SF3A1	98	86.693	ENSNBRG00000016642	sf3a1	96	86.561	Neolamprologus_brichardi
ENSPTIG00000000844	SF3A1	100	98.834	ENSNLEG00000003686	SF3A1	97	98.834	Nomascus_leucogenys
ENSPTIG00000000844	SF3A1	95	87.772	ENSMEUG00000008741	SF3A1	97	87.821	Notamacropus_eugenii
ENSPTIG00000000844	SF3A1	100	98.575	ENSOPRG00000016636	SF3A1	97	98.575	Ochotona_princeps
ENSPTIG00000000844	SF3A1	100	98.834	ENSODEG00000002571	SF3A1	97	98.834	Octodon_degus
ENSPTIG00000000844	SF3A1	99	85.677	ENSONIG00000010848	sf3a1	99	85.032	Oreochromis_niloticus
ENSPTIG00000000844	SF3A1	100	98.964	ENSOCUG00000007633	SF3A1	97	98.964	Oryctolagus_cuniculus
ENSPTIG00000000844	SF3A1	95	83.743	ENSORLG00000013050	sf3a1	98	83.693	Oryzias_latipes
ENSPTIG00000000844	SF3A1	95	84.563	ENSORLG00020003236	sf3a1	93	83.671	Oryzias_latipes_hni
ENSPTIG00000000844	SF3A1	100	83.204	ENSORLG00015017411	sf3a1	98	83.721	Oryzias_latipes_hsok
ENSPTIG00000000844	SF3A1	100	83.592	ENSOMEG00000013362	sf3a1	98	83.333	Oryzias_melastigma
ENSPTIG00000000844	SF3A1	100	98.834	ENSOGAG00000012931	SF3A1	97	98.834	Otolemur_garnettii
ENSPTIG00000000844	SF3A1	100	97.409	ENSOARG00000006849	SF3A1	97	97.409	Ovis_aries
ENSPTIG00000000844	SF3A1	100	97.668	ENSPPAG00000041790	SF3A1	97	97.668	Pan_paniscus
ENSPTIG00000000844	SF3A1	100	99.870	ENSPPRG00000004391	SF3A1	97	99.870	Panthera_pardus
ENSPTIG00000000844	SF3A1	100	98.705	ENSPTRG00000014240	SF3A1	97	98.705	Pan_troglodytes
ENSPTIG00000000844	SF3A1	100	98.834	ENSPANG00000020772	SF3A1	97	98.834	Papio_anubis
ENSPTIG00000000844	SF3A1	85	93.407	ENSPSIG00000012803	SF3A1	96	94.350	Pelodiscus_sinensis
ENSPTIG00000000844	SF3A1	99	84.031	ENSPMGG00000023096	sf3a1	100	84.031	Periophthalmus_magnuspinnatus
ENSPTIG00000000844	SF3A1	100	98.575	ENSPEMG00000009494	Sf3a1	97	98.575	Peromyscus_maniculatus_bairdii
ENSPTIG00000000844	SF3A1	66	81.128	ENSPMAG00000007139	-	89	79.434	Petromyzon_marinus
ENSPTIG00000000844	SF3A1	99	97.789	ENSPCIG00000022692	SF3A1	97	97.789	Phascolarctos_cinereus
ENSPTIG00000000844	SF3A1	95	79.048	ENSPFOG00000016768	sf3a1	93	78.503	Poecilia_formosa
ENSPTIG00000000844	SF3A1	99	85.229	ENSPLAG00000017268	sf3a1	97	84.706	Poecilia_latipinna
ENSPTIG00000000844	SF3A1	86	85.542	ENSPMEG00000019811	sf3a1	98	84.789	Poecilia_mexicana
ENSPTIG00000000844	SF3A1	99	85.359	ENSPREG00000010347	sf3a1	97	85.098	Poecilia_reticulata
ENSPTIG00000000844	SF3A1	100	98.834	ENSPPYG00000011707	SF3A1	97	98.834	Pongo_abelii
ENSPTIG00000000844	SF3A1	59	98.340	ENSPCAG00000003266	SF3A1	57	98.340	Procavia_capensis
ENSPTIG00000000844	SF3A1	100	98.964	ENSPCOG00000026630	SF3A1	97	98.964	Propithecus_coquereli
ENSPTIG00000000844	SF3A1	97	98.926	ENSPVAG00000017719	SF3A1	94	98.926	Pteropus_vampyrus
ENSPTIG00000000844	SF3A1	99	85.788	ENSPNYG00000018706	sf3a1	99	85.659	Pundamilia_nyererei
ENSPTIG00000000844	SF3A1	99	84.525	ENSPNAG00000003721	sf3a1	98	85.306	Pygocentrus_nattereri
ENSPTIG00000000844	SF3A1	100	98.446	ENSRNOG00000005218	Sf3a1	97	98.446	Rattus_norvegicus
ENSPTIG00000000844	SF3A1	100	98.834	ENSRBIG00000032167	SF3A1	97	98.834	Rhinopithecus_bieti
ENSPTIG00000000844	SF3A1	100	98.834	ENSRROG00000044908	SF3A1	97	98.834	Rhinopithecus_roxellana
ENSPTIG00000000844	SF3A1	100	94.961	ENSSBOG00000021960	SF3A1	100	99.114	Saimiri_boliviensis_boliviensis
ENSPTIG00000000844	SF3A1	99	95.319	ENSSHAG00000003666	SF3A1	97	95.319	Sarcophilus_harrisii
ENSPTIG00000000844	SF3A1	100	84.596	ENSSFOG00015004579	sf3a1	98	85.237	Scleropages_formosus
ENSPTIG00000000844	SF3A1	99	83.399	ENSSMAG00000004275	sf3a1	97	82.614	Scophthalmus_maximus
ENSPTIG00000000844	SF3A1	99	85.290	ENSSDUG00000022219	sf3a1	99	84.774	Seriola_dumerili
ENSPTIG00000000844	SF3A1	99	85.290	ENSSLDG00000012642	sf3a1	99	84.774	Seriola_lalandi_dorsalis
ENSPTIG00000000844	SF3A1	100	95.725	ENSSARG00000005960	SF3A1	100	95.725	Sorex_araneus
ENSPTIG00000000844	SF3A1	99	91.839	ENSSPUG00000018863	SF3A1	97	92.337	Sphenodon_punctatus
ENSPTIG00000000844	SF3A1	99	86.405	ENSSPAG00000011856	sf3a1	98	85.013	Stegastes_partitus
ENSPTIG00000000844	SF3A1	100	99.223	ENSSSCG00000010002	SF3A1	97	99.223	Sus_scrofa
ENSPTIG00000000844	SF3A1	98	93.931	ENSTGUG00000010547	SF3A1	99	93.385	Taeniopygia_guttata
ENSPTIG00000000844	SF3A1	99	83.137	ENSTRUG00000006118	sf3a1	97	82.092	Takifugu_rubripes
ENSPTIG00000000844	SF3A1	66	80.297	ENSTNIG00000005713	sf3a1	89	85.714	Tetraodon_nigroviridis
ENSPTIG00000000844	SF3A1	100	91.321	ENSTBEG00000012771	SF3A1	97	91.321	Tupaia_belangeri
ENSPTIG00000000844	SF3A1	100	98.965	ENSTTRG00000001535	SF3A1	97	98.965	Tursiops_truncatus
ENSPTIG00000000844	SF3A1	99	98.825	ENSUAMG00000006750	SF3A1	96	98.825	Ursus_americanus
ENSPTIG00000000844	SF3A1	100	99.482	ENSUMAG00000016665	SF3A1	98	99.482	Ursus_maritimus
ENSPTIG00000000844	SF3A1	100	99.611	ENSVVUG00000003075	SF3A1	97	99.611	Vulpes_vulpes
ENSPTIG00000000844	SF3A1	98	88.173	ENSXETG00000016144	sf3a1	97	86.883	Xenopus_tropicalis
ENSPTIG00000000844	SF3A1	99	84.706	ENSXCOG00000015653	sf3a1	97	84.183	Xiphophorus_couchianus
ENSPTIG00000000844	SF3A1	99	84.837	ENSXMAG00000002753	sf3a1	97	84.314	Xiphophorus_maculatus