EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000000915 (Gene tree)
Gene ID: 102954942
Gene Symbol: SMARCA1
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 70360 bases
Position: chrKE721818.1:3393106-3463465
Accession: 102954942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000000509	ResIII	PF04851.15	1.5e-12	1	1
ENSPTIP00000000509	DEAD	PF00270.29	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000001407	SMARCA1-201	3099	XM_007085436	ENSPTIP00000000509	1032 (aa)	XP_007085498	-

Gene Model

Click here to download ENSPTIG00000000915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000000915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000000915	SMARCA1	54	45.522	ENSPTIG00000007647	HELLS	76	45.522
ENSPTIG00000000915	SMARCA1	96	83.968	ENSPTIG00000020959	SMARCA5	94	83.968

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000000915	SMARCA1	98	97.151	ENSG00000102038	SMARCA1	95	97.151	Homo_sapiens
ENSPTIG00000000915	SMARCA1	96	81.974	ENSAPOG00000016035	smarca5	98	82.277	Acanthochromis_polyacanthus
ENSPTIG00000000915	SMARCA1	98	97.453	ENSAMEG00000015218	SMARCA1	95	97.453	Ailuropoda_melanoleuca
ENSPTIG00000000915	SMARCA1	89	82.174	ENSACIG00000016982	smarca5	99	82.256	Amphilophus_citrinellus
ENSPTIG00000000915	SMARCA1	96	81.974	ENSAOCG00000015578	smarca5	95	81.033	Amphiprion_ocellaris
ENSPTIG00000000915	SMARCA1	96	81.974	ENSAPEG00000011117	smarca5	99	82.197	Amphiprion_percula
ENSPTIG00000000915	SMARCA1	96	81.481	ENSATEG00000012894	smarca5	95	80.933	Anabas_testudineus
ENSPTIG00000000915	SMARCA1	96	91.091	ENSAPLG00000013149	SMARCA1	100	91.091	Anas_platyrhynchos
ENSPTIG00000000915	SMARCA1	98	89.479	ENSACAG00000011376	SMARCA1	95	89.479	Anolis_carolinensis
ENSPTIG00000000915	SMARCA1	98	92.885	ENSANAG00000023098	SMARCA1	94	92.892	Aotus_nancymaae
ENSPTIG00000000915	SMARCA1	96	81.882	ENSACLG00000025356	smarca5	95	81.467	Astatotilapia_calliptera
ENSPTIG00000000915	SMARCA1	91	86.272	ENSAMXG00000011227	smarca1	99	87.648	Astyanax_mexicanus
ENSPTIG00000000915	SMARCA1	96	82.258	ENSAMXG00000005709	smarca5	94	82.258	Astyanax_mexicanus
ENSPTIG00000000915	SMARCA1	98	96.749	ENSBTAG00000002292	SMARCA1	94	96.985	Bos_taurus
ENSPTIG00000000915	SMARCA1	96	61.768	WBGene00002169	isw-1	97	61.768	Caenorhabditis_elegans
ENSPTIG00000000915	SMARCA1	98	96.955	ENSCJAG00000002868	SMARCA1	95	96.955	Callithrix_jacchus
ENSPTIG00000000915	SMARCA1	98	88.258	ENSCAFG00000018673	SMARCA1	99	87.082	Canis_familiaris
ENSPTIG00000000915	SMARCA1	98	97.738	ENSCAFG00020001751	SMARCA1	95	97.738	Canis_lupus_dingo
ENSPTIG00000000915	SMARCA1	98	96.952	ENSCHIG00000009837	SMARCA1	94	97.085	Capra_hircus
ENSPTIG00000000915	SMARCA1	98	96.562	ENSTSYG00000004240	SMARCA1	98	95.604	Carlito_syrichta
ENSPTIG00000000915	SMARCA1	98	95.015	ENSCPOG00000013601	SMARCA1	95	95.779	Cavia_porcellus
ENSPTIG00000000915	SMARCA1	98	93.805	ENSCCAG00000030817	SMARCA1	94	93.811	Cebus_capucinus
ENSPTIG00000000915	SMARCA1	98	97.151	ENSCATG00000015921	SMARCA1	95	97.151	Cercocebus_atys
ENSPTIG00000000915	SMARCA1	98	95.477	ENSCLAG00000002171	SMARCA1	95	95.477	Chinchilla_lanigera
ENSPTIG00000000915	SMARCA1	98	96.755	ENSCSAG00000008460	SMARCA1	95	96.755	Chlorocebus_sabaeus
ENSPTIG00000000915	SMARCA1	98	90.954	ENSCPBG00000001146	SMARCA1	94	90.954	Chrysemys_picta_bellii
ENSPTIG00000000915	SMARCA1	96	71.358	ENSCING00000004110	swi/snf	98	71.358	Ciona_intestinalis
ENSPTIG00000000915	SMARCA1	96	71.443	ENSCSAVG00000004620	-	100	72.350	Ciona_savignyi
ENSPTIG00000000915	SMARCA1	98	97.053	ENSCANG00000007183	SMARCA1	95	97.053	Colobus_angolensis_palliatus
ENSPTIG00000000915	SMARCA1	98	94.390	ENSCGRG00001010776	Smarca1	94	94.467	Cricetulus_griseus_chok1gshd
ENSPTIG00000000915	SMARCA1	96	94.266	ENSCGRG00000015301	Smarca1	98	94.266	Cricetulus_griseus_crigri
ENSPTIG00000000915	SMARCA1	96	81.974	ENSCSEG00000000328	smarca5	95	81.231	Cynoglossus_semilaevis
ENSPTIG00000000915	SMARCA1	96	81.281	ENSCVAG00000008668	smarca5	99	81.640	Cyprinodon_variegatus
ENSPTIG00000000915	SMARCA1	97	83.479	ENSDARG00000012776	smarca1	97	83.479	Danio_rerio
ENSPTIG00000000915	SMARCA1	97	80.915	ENSDARG00000052348	smarca5	95	80.915	Danio_rerio
ENSPTIG00000000915	SMARCA1	96	95.070	ENSDNOG00000004315	SMARCA1	94	95.070	Dasypus_novemcinctus
ENSPTIG00000000915	SMARCA1	96	94.769	ENSDORG00000009270	Smarca1	94	94.769	Dipodomys_ordii
ENSPTIG00000000915	SMARCA1	93	72.531	FBgn0011604	Iswi	98	70.833	Drosophila_melanogaster
ENSPTIG00000000915	SMARCA1	80	92.857	ENSETEG00000017426	SMARCA1	85	92.857	Echinops_telfairi
ENSPTIG00000000915	SMARCA1	96	78.916	ENSEBUG00000001239	smarca5	96	78.916	Eptatretus_burgeri
ENSPTIG00000000915	SMARCA1	98	91.707	ENSEASG00005008218	SMARCA1	100	91.857	Equus_asinus_asinus
ENSPTIG00000000915	SMARCA1	98	97.345	ENSECAG00000012106	SMARCA1	94	97.345	Equus_caballus
ENSPTIG00000000915	SMARCA1	77	98.013	ENSEEUG00000014927	SMARCA1	82	98.013	Erinaceus_europaeus
ENSPTIG00000000915	SMARCA1	98	84.412	ENSELUG00000010515	smarca1	98	84.477	Esox_lucius
ENSPTIG00000000915	SMARCA1	98	97.839	ENSFCAG00000018496	SMARCA1	95	97.839	Felis_catus
ENSPTIG00000000915	SMARCA1	90	90.968	ENSFALG00000000209	SMARCA1	98	91.066	Ficedula_albicollis
ENSPTIG00000000915	SMARCA1	96	96.181	ENSFDAG00000009818	SMARCA1	97	96.181	Fukomys_damarensis
ENSPTIG00000000915	SMARCA1	96	81.682	ENSFHEG00000007687	smarca5	94	81.132	Fundulus_heteroclitus
ENSPTIG00000000915	SMARCA1	94	91.095	ENSGALG00000008431	SMARCA1	97	90.827	Gallus_gallus
ENSPTIG00000000915	SMARCA1	96	81.682	ENSGAFG00000017731	smarca5	95	81.132	Gambusia_affinis
ENSPTIG00000000915	SMARCA1	95	91.507	ENSGAGG00000023575	SMARCA1	100	91.507	Gopherus_agassizii
ENSPTIG00000000915	SMARCA1	72	96.000	ENSGGOG00000012841	-	95	96.000	Gorilla_gorilla
ENSPTIG00000000915	SMARCA1	98	94.887	ENSHGLG00000003080	SMARCA1	95	94.887	Heterocephalus_glaber_female
ENSPTIG00000000915	SMARCA1	98	94.499	ENSHGLG00100001102	SMARCA1	100	94.499	Heterocephalus_glaber_male
ENSPTIG00000000915	SMARCA1	96	81.809	ENSHCOG00000005458	smarca5	95	81.132	Hippocampus_comes
ENSPTIG00000000915	SMARCA1	97	80.957	ENSIPUG00000005229	SMARCA5	97	80.957	Ictalurus_punctatus
ENSPTIG00000000915	SMARCA1	97	84.341	ENSIPUG00000016905	Smarca1	99	84.940	Ictalurus_punctatus
ENSPTIG00000000915	SMARCA1	98	96.264	ENSSTOG00000014524	SMARCA1	95	96.264	Ictidomys_tridecemlineatus
ENSPTIG00000000915	SMARCA1	98	94.423	ENSJJAG00000002593	Smarca1	95	94.423	Jaculus_jaculus
ENSPTIG00000000915	SMARCA1	96	81.910	ENSKMAG00000003777	smarca5	95	81.231	Kryptolebias_marmoratus
ENSPTIG00000000915	SMARCA1	91	82.068	ENSLBEG00000013295	SMARCA1	100	82.797	Labrus_bergylta
ENSPTIG00000000915	SMARCA1	97	80.933	ENSLBEG00000018112	smarca5	95	80.933	Labrus_bergylta
ENSPTIG00000000915	SMARCA1	98	88.102	ENSLACG00000016697	SMARCA1	98	88.102	Latimeria_chalumnae
ENSPTIG00000000915	SMARCA1	98	86.871	ENSLOCG00000014591	smarca1	97	86.871	Lepisosteus_oculatus
ENSPTIG00000000915	SMARCA1	98	94.526	ENSLAFG00000000896	SMARCA1	100	94.526	Loxodonta_africana
ENSPTIG00000000915	SMARCA1	98	97.151	ENSMFAG00000002117	SMARCA1	97	96.586	Macaca_fascicularis
ENSPTIG00000000915	SMARCA1	98	97.151	ENSMMUG00000008818	SMARCA1	99	96.193	Macaca_mulatta
ENSPTIG00000000915	SMARCA1	98	97.151	ENSMNEG00000041768	SMARCA1	97	96.586	Macaca_nemestrina
ENSPTIG00000000915	SMARCA1	98	97.053	ENSMLEG00000043198	SMARCA1	95	97.053	Mandrillus_leucophaeus
ENSPTIG00000000915	SMARCA1	96	81.982	ENSMAMG00000014294	smarca5	96	80.924	Mastacembelus_armatus
ENSPTIG00000000915	SMARCA1	96	81.882	ENSMZEG00005009369	smarca5	95	81.467	Maylandia_zebra
ENSPTIG00000000915	SMARCA1	98	90.462	ENSMGAG00000007042	SMARCA1	99	90.462	Meleagris_gallopavo
ENSPTIG00000000915	SMARCA1	96	94.970	ENSMAUG00000008133	Smarca1	94	94.975	Mesocricetus_auratus
ENSPTIG00000000915	SMARCA1	98	96.955	ENSMICG00000015768	SMARCA1	95	96.955	Microcebus_murinus
ENSPTIG00000000915	SMARCA1	98	94.406	ENSMOCG00000009464	Smarca1	95	94.227	Microtus_ochrogaster
ENSPTIG00000000915	SMARCA1	97	79.444	ENSMMOG00000005547	smarca5	99	79.444	Mola_mola
ENSPTIG00000000915	SMARCA1	97	90.139	ENSMODG00000013187	-	96	89.577	Monodelphis_domestica
ENSPTIG00000000915	SMARCA1	96	81.608	ENSMALG00000002081	smarca5	97	81.193	Monopterus_albus
ENSPTIG00000000915	SMARCA1	98	94.521	MGP_CAROLIEiJ_G0033034	Smarca1	95	94.521	Mus_caroli
ENSPTIG00000000915	SMARCA1	98	94.618	ENSMUSG00000031099	Smarca1	95	94.618	Mus_musculus
ENSPTIG00000000915	SMARCA1	98	94.423	MGP_PahariEiJ_G0031579	Smarca1	95	94.423	Mus_pahari
ENSPTIG00000000915	SMARCA1	98	94.618	MGP_SPRETEiJ_G0034192	Smarca1	95	94.618	Mus_spretus
ENSPTIG00000000915	SMARCA1	98	97.839	ENSMPUG00000017423	SMARCA1	89	97.839	Mustela_putorius_furo
ENSPTIG00000000915	SMARCA1	98	95.575	ENSMLUG00000029614	SMARCA1	95	95.575	Myotis_lucifugus
ENSPTIG00000000915	SMARCA1	96	96.080	ENSNGAG00000006492	Smarca1	94	96.080	Nannospalax_galili
ENSPTIG00000000915	SMARCA1	96	81.982	ENSNBRG00000004463	smarca5	99	81.430	Neolamprologus_brichardi
ENSPTIG00000000915	SMARCA1	98	96.365	ENSNLEG00000015179	SMARCA1	98	95.687	Nomascus_leucogenys
ENSPTIG00000000915	SMARCA1	92	81.191	ENSMEUG00000008819	SMARCA1	100	81.191	Notamacropus_eugenii
ENSPTIG00000000915	SMARCA1	96	95.176	ENSODEG00000012163	SMARCA1	94	95.176	Octodon_degus
ENSPTIG00000000915	SMARCA1	96	81.982	ENSONIG00000009993	smarca5	95	81.566	Oreochromis_niloticus
ENSPTIG00000000915	SMARCA1	95	91.608	ENSOANG00000002862	SMARCA1	100	91.608	Ornithorhynchus_anatinus
ENSPTIG00000000915	SMARCA1	98	95.182	ENSOCUG00000001047	SMARCA1	95	95.182	Oryctolagus_cuniculus
ENSPTIG00000000915	SMARCA1	96	81.910	ENSORLG00000021998	smarca5	95	81.231	Oryzias_latipes
ENSPTIG00000000915	SMARCA1	96	82.010	ENSORLG00020017679	smarca5	95	81.331	Oryzias_latipes_hni
ENSPTIG00000000915	SMARCA1	96	81.910	ENSORLG00015017210	smarca5	95	81.132	Oryzias_latipes_hsok
ENSPTIG00000000915	SMARCA1	96	81.910	ENSOMEG00000000086	smarca5	95	81.132	Oryzias_melastigma
ENSPTIG00000000915	SMARCA1	96	96.583	ENSOGAG00000004399	SMARCA1	94	96.583	Otolemur_garnettii
ENSPTIG00000000915	SMARCA1	98	97.247	ENSOARG00000014638	SMARCA1	100	97.247	Ovis_aries
ENSPTIG00000000915	SMARCA1	98	97.151	ENSPPAG00000034647	SMARCA1	95	97.151	Pan_paniscus
ENSPTIG00000000915	SMARCA1	98	98.035	ENSPPRG00000008929	SMARCA1	95	98.035	Panthera_pardus
ENSPTIG00000000915	SMARCA1	98	97.151	ENSPTRG00000049876	SMARCA1	95	97.151	Pan_troglodytes
ENSPTIG00000000915	SMARCA1	98	97.151	ENSPANG00000003871	SMARCA1	95	97.151	Papio_anubis
ENSPTIG00000000915	SMARCA1	93	84.959	ENSPKIG00000013411	smarca1	98	84.811	Paramormyrops_kingsleyae
ENSPTIG00000000915	SMARCA1	98	90.963	ENSPSIG00000010101	SMARCA1	100	91.203	Pelodiscus_sinensis
ENSPTIG00000000915	SMARCA1	96	95.770	ENSPEMG00000017503	Smarca1	94	95.678	Peromyscus_maniculatus_bairdii
ENSPTIG00000000915	SMARCA1	98	90.265	ENSPCIG00000015460	SMARCA1	98	90.265	Phascolarctos_cinereus
ENSPTIG00000000915	SMARCA1	96	81.910	ENSPFOG00000007649	smarca5	95	81.132	Poecilia_formosa
ENSPTIG00000000915	SMARCA1	96	81.910	ENSPLAG00000003363	smarca5	95	81.132	Poecilia_latipinna
ENSPTIG00000000915	SMARCA1	96	81.809	ENSPMEG00000019849	smarca5	95	81.033	Poecilia_mexicana
ENSPTIG00000000915	SMARCA1	96	81.809	ENSPREG00000023250	smarca5	95	81.033	Poecilia_reticulata
ENSPTIG00000000915	SMARCA1	98	94.002	ENSPPYG00000020703	SMARCA1	95	94.002	Pongo_abelii
ENSPTIG00000000915	SMARCA1	79	89.189	ENSPCOG00000020722	SMARCA1	94	90.544	Propithecus_coquereli
ENSPTIG00000000915	SMARCA1	90	95.658	ENSPVAG00000003805	SMARCA1	88	95.658	Pteropus_vampyrus
ENSPTIG00000000915	SMARCA1	58	84.658	ENSPNYG00000012299	smarca5	94	83.467	Pundamilia_nyererei
ENSPTIG00000000915	SMARCA1	98	95.084	ENSRNOG00000003762	Smarca1	95	95.084	Rattus_norvegicus
ENSPTIG00000000915	SMARCA1	98	97.053	ENSRROG00000034167	SMARCA1	95	97.053	Rhinopithecus_roxellana
ENSPTIG00000000915	SMARCA1	98	97.053	ENSSBOG00000020641	SMARCA1	100	96.790	Saimiri_boliviensis_boliviensis
ENSPTIG00000000915	SMARCA1	95	84.545	ENSSHAG00000013518	SMARCA1	99	84.545	Sarcophilus_harrisii
ENSPTIG00000000915	SMARCA1	98	85.714	ENSSFOG00015009043	smarca1	98	85.714	Scleropages_formosus
ENSPTIG00000000915	SMARCA1	98	80.550	ENSSFOG00015016794	smarca5	100	81.864	Scleropages_formosus
ENSPTIG00000000915	SMARCA1	97	80.777	ENSSMAG00000004801	smarca5	95	80.777	Scophthalmus_maximus
ENSPTIG00000000915	SMARCA1	96	81.481	ENSSDUG00000020690	smarca5	96	80.933	Seriola_dumerili
ENSPTIG00000000915	SMARCA1	96	81.481	ENSSLDG00000025190	smarca5	96	80.933	Seriola_lalandi_dorsalis
ENSPTIG00000000915	SMARCA1	88	87.296	ENSSARG00000000842	SMARCA1	91	87.296	Sorex_araneus
ENSPTIG00000000915	SMARCA1	96	90.232	ENSSPUG00000000590	SMARCA1	94	90.232	Sphenodon_punctatus
ENSPTIG00000000915	SMARCA1	96	81.582	ENSSPAG00000002894	smarca5	97	82.277	Stegastes_partitus
ENSPTIG00000000915	SMARCA1	96	97.082	ENSSSCG00000012649	SMARCA1	97	94.912	Sus_scrofa
ENSPTIG00000000915	SMARCA1	96	90.591	ENSTGUG00000003899	-	100	90.591	Taeniopygia_guttata
ENSPTIG00000000915	SMARCA1	96	81.682	ENSTRUG00000014094	smarca5	95	81.132	Takifugu_rubripes
ENSPTIG00000000915	SMARCA1	96	80.967	ENSTNIG00000017717	smarca5	94	80.139	Tetraodon_nigroviridis
ENSPTIG00000000915	SMARCA1	96	89.347	ENSTBEG00000014973	SMARCA1	99	89.347	Tupaia_belangeri
ENSPTIG00000000915	SMARCA1	95	94.034	ENSTTRG00000006168	SMARCA1	99	94.034	Tursiops_truncatus
ENSPTIG00000000915	SMARCA1	98	97.345	ENSUAMG00000020201	SMARCA1	95	97.345	Ursus_americanus
ENSPTIG00000000915	SMARCA1	98	93.222	ENSUMAG00000004073	SMARCA1	97	99.757	Ursus_maritimus
ENSPTIG00000000915	SMARCA1	75	99.675	ENSVPAG00000010492	-	80	99.675	Vicugna_pacos
ENSPTIG00000000915	SMARCA1	98	97.640	ENSVVUG00000008878	SMARCA1	99	97.640	Vulpes_vulpes
ENSPTIG00000000915	SMARCA1	97	87.735	ENSXETG00000001526	smarca1	99	87.735	Xenopus_tropicalis
ENSPTIG00000000915	SMARCA1	96	81.582	ENSXCOG00000011170	smarca5	98	81.033	Xiphophorus_couchianus
ENSPTIG00000000915	SMARCA1	96	81.582	ENSXMAG00000009678	smarca5	97	82.992	Xiphophorus_maculatus