EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000001243 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 1950 bases
Position: chrKE721868.1:2343690-2345639
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000000487	KH_1	PF00013.29	3.8e-14	1	1
ENSPTIP00000000487	DEAD	PF00270.29	4.7e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000001335	-	1950	-	ENSPTIP00000000487	649 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000001243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000001243's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000001243	-	68	44.719	ENSPTIG00000008733	DDX17	88	44.772
ENSPTIG00000001243	-	53	35.795	ENSPTIG00000011259	DDX49	71	35.795
ENSPTIG00000001243	-	53	30.641	ENSPTIG00000000185	-	71	30.641
ENSPTIG00000001243	-	59	31.593	ENSPTIG00000011207	EIF4A2	92	32.059
ENSPTIG00000001243	-	53	36.313	ENSPTIG00000008454	DDX50	50	37.047
ENSPTIG00000001243	-	55	37.017	ENSPTIG00000019604	DDX47	76	36.986
ENSPTIG00000001243	-	56	30.730	ENSPTIG00000006444	DDX28	74	30.457
ENSPTIG00000001243	-	60	37.280	ENSPTIG00000011662	DDX27	51	37.280
ENSPTIG00000001243	-	54	31.285	ENSPTIG00000017287	DDX39A	82	31.285
ENSPTIG00000001243	-	62	39.320	ENSPTIG00000007748	DDX4	69	38.653
ENSPTIG00000001243	-	55	35.040	ENSPTIG00000004868	DDX18	51	35.311
ENSPTIG00000001243	-	55	32.133	ENSPTIG00000012373	-	89	32.507
ENSPTIG00000001243	-	62	35.280	ENSPTIG00000007021	DDX59	64	35.280
ENSPTIG00000001243	-	53	30.362	ENSPTIG00000008190	DDX19A	72	30.362
ENSPTIG00000001243	-	53	33.430	ENSPTIG00000009646	EIF4A3	92	33.626
ENSPTIG00000001243	-	55	30.471	ENSPTIG00000017669	DDX39B	83	30.471
ENSPTIG00000001243	-	59	35.038	ENSPTIG00000013697	DDX52	66	35.038
ENSPTIG00000001243	-	67	44.470	ENSPTIG00000010353	DDX5	74	43.197
ENSPTIG00000001243	-	57	40.617	ENSPTIG00000014814	DDX3X	63	40.494
ENSPTIG00000001243	-	55	32.584	ENSPTIG00000018551	DDX6	72	32.584
ENSPTIG00000001243	-	55	38.462	ENSPTIG00000013158	DDX24	60	33.010
ENSPTIG00000001243	-	90	72.337	ENSPTIG00000017842	-	90	72.337
ENSPTIG00000001243	-	59	40.695	ENSPTIG00000016749	DDX3Y	61	40.146
ENSPTIG00000001243	-	58	38.363	ENSPTIG00000020225	DDX41	62	38.363
ENSPTIG00000001243	-	50	31.579	ENSPTIG00000011490	DDX55	56	31.579
ENSPTIG00000001243	-	59	41.063	ENSPTIG00000018873	DDX23	50	41.063

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000001243	-	90	82.683	ENSAMEG00000019953	-	96	83.048	Ailuropoda_melanoleuca
ENSPTIG00000001243	-	94	74.795	ENSBTAG00000046635	-	94	76.884	Bos_taurus
ENSPTIG00000001243	-	59	81.365	ENSCAFG00020005312	-	82	80.940	Canis_lupus_dingo
ENSPTIG00000001243	-	97	74.606	ENSCHIG00000020582	-	92	79.859	Capra_hircus
ENSPTIG00000001243	-	99	67.325	ENSCPOG00000013960	-	89	72.109	Cavia_porcellus
ENSPTIG00000001243	-	87	72.260	ENSCLAG00000017424	-	87	72.260	Chinchilla_lanigera
ENSPTIG00000001243	-	89	79.376	ENSEASG00005001728	-	95	74.495	Equus_asinus_asinus
ENSPTIG00000001243	-	89	79.203	ENSECAG00000037015	DDX53	99	74.339	Equus_caballus
ENSPTIG00000001243	-	89	78.966	ENSECAG00000035665	-	99	74.415	Equus_caballus
ENSPTIG00000001243	-	76	71.197	ENSFDAG00000020660	-	96	71.197	Fukomys_damarensis
ENSPTIG00000001243	-	64	69.976	ENSFDAG00000018215	-	85	72.774	Fukomys_damarensis
ENSPTIG00000001243	-	96	71.689	ENSSTOG00000027719	-	77	77.226	Ictidomys_tridecemlineatus
ENSPTIG00000001243	-	99	71.472	ENSLAFG00000011531	-	92	76.804	Loxodonta_africana
ENSPTIG00000001243	-	90	85.034	ENSMPUG00000019441	-	96	85.034	Mustela_putorius_furo
ENSPTIG00000001243	-	99	68.092	ENSMLUG00000022321	-	99	68.855	Myotis_lucifugus
ENSPTIG00000001243	-	90	73.424	ENSMLUG00000022233	-	96	73.424	Myotis_lucifugus
ENSPTIG00000001243	-	87	75.972	ENSOCUG00000004437	-	89	75.972	Oryctolagus_cuniculus
ENSPTIG00000001243	-	98	70.736	ENSOGAG00000026282	-	92	74.099	Otolemur_garnettii
ENSPTIG00000001243	-	97	74.960	ENSOARG00000016525	-	92	80.284	Ovis_aries
ENSPTIG00000001243	-	100	99.231	ENSPPRG00000011327	-	100	99.231	Panthera_pardus
ENSPTIG00000001243	-	90	79.522	ENSPVAG00000001484	-	99	73.926	Pteropus_vampyrus
ENSPTIG00000001243	-	99	75.920	ENSSSCG00000012169	-	99	76.352	Sus_scrofa
ENSPTIG00000001243	-	90	75.514	ENSTBEG00000014650	-	92	75.514	Tupaia_belangeri
ENSPTIG00000001243	-	55	51.124	ENSTBEG00000001513	-	85	52.568	Tupaia_belangeri
ENSPTIG00000001243	-	100	67.994	ENSTTRG00000016514	-	99	67.381	Tursiops_truncatus
ENSPTIG00000001243	-	90	84.941	ENSUAMG00000000177	-	91	85.886	Ursus_americanus
ENSPTIG00000001243	-	57	87.936	ENSUMAG00000011448	-	84	87.936	Ursus_maritimus
ENSPTIG00000001243	-	100	75.576	ENSVPAG00000007860	-	99	74.962	Vicugna_pacos
ENSPTIG00000001243	-	93	80.763	ENSVVUG00000012789	-	96	81.695	Vulpes_vulpes