EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000002680 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 7105 bases
Position: chrKE721567.1:1005863-1012967
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000001012	zf-C2H2	PF00096.26	3.2e-22	1	4
ENSPTIP00000001012	zf-C2H2	PF00096.26	3.2e-22	2	4
ENSPTIP00000001012	zf-C2H2	PF00096.26	3.2e-22	3	4
ENSPTIP00000001012	zf-C2H2	PF00096.26	3.2e-22	4	4
ENSPTIP00000001012	zf-met	PF12874.7	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000002940	-	408	-	ENSPTIP00000001012	135 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000002680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000002680's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000002680	-	99	48.113	ENSPTIG00000014852	ZNF234	79	48.113
ENSPTIG00000002680	-	87	46.591	ENSPTIG00000016461	ZNF317	73	46.591
ENSPTIG00000002680	-	84	50.562	ENSPTIG00000016395	-	63	50.562
ENSPTIG00000002680	-	93	46.154	ENSPTIG00000009156	ZNF770	54	46.154
ENSPTIG00000002680	-	98	46.789	ENSPTIG00000010807	PRDM5	73	46.789
ENSPTIG00000002680	-	97	47.664	ENSPTIG00000017612	ZNF81	60	47.664
ENSPTIG00000002680	-	92	48.864	ENSPTIG00000009259	-	78	48.864
ENSPTIG00000002680	-	93	48.673	ENSPTIG00000002831	ZNF112	65	48.673
ENSPTIG00000002680	-	91	44.860	ENSPTIG00000009499	-	93	44.860
ENSPTIG00000002680	-	91	46.018	ENSPTIG00000009517	-	97	46.018
ENSPTIG00000002680	-	86	46.939	ENSPTIG00000012277	-	93	44.144
ENSPTIG00000002680	-	100	51.220	ENSPTIG00000019160	ZFP69B	51	51.220
ENSPTIG00000002680	-	99	48.246	ENSPTIG00000017831	ZNF226	73	48.246
ENSPTIG00000002680	-	96	48.864	ENSPTIG00000009310	-	72	48.864
ENSPTIG00000002680	-	84	62.500	ENSPTIG00000007736	ZNF768	52	62.500
ENSPTIG00000002680	-	95	48.598	ENSPTIG00000021573	ZNF235	63	48.598
ENSPTIG00000002680	-	87	49.425	ENSPTIG00000009843	ZFP1	69	49.425
ENSPTIG00000002680	-	86	42.609	ENSPTIG00000013306	-	82	42.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000002680	-	99	88.722	ENSAMEG00000013858	-	92	88.722	Ailuropoda_melanoleuca
ENSPTIG00000002680	-	88	70.940	ENSACIG00000002180	-	99	70.940	Amphilophus_citrinellus
ENSPTIG00000002680	-	88	80.342	ENSACLG00000001258	-	91	80.342	Astatotilapia_calliptera
ENSPTIG00000002680	-	99	82.707	ENSAMXG00000006669	GFI1	54	82.707	Astyanax_mexicanus
ENSPTIG00000002680	-	81	83.636	ENSAMXG00000015228	-	51	83.636	Astyanax_mexicanus
ENSPTIG00000002680	-	84	100.000	ENSCAPG00000016268	-	100	100.000	Cavia_aperea
ENSPTIG00000002680	-	99	88.722	ENSCPBG00000015742	-	99	88.722	Chrysemys_picta_bellii
ENSPTIG00000002680	-	85	80.702	ENSCING00000011342	-	92	80.702	Ciona_intestinalis
ENSPTIG00000002680	-	87	79.487	ENSCSAVG00000005904	-	72	79.487	Ciona_savignyi
ENSPTIG00000002680	-	99	88.722	ENSCGRG00000013485	-	99	88.722	Cricetulus_griseus_crigri
ENSPTIG00000002680	-	99	88.722	ENSDORG00000023443	-	99	88.722	Dipodomys_ordii
ENSPTIG00000002680	-	96	81.395	ENSEBUG00000008075	gfi1ab	57	81.395	Eptatretus_burgeri
ENSPTIG00000002680	-	99	88.722	ENSFDAG00000019296	-	99	88.722	Fukomys_damarensis
ENSPTIG00000002680	-	99	88.722	ENSGAGG00000015899	GFI1	99	88.722	Gopherus_agassizii
ENSPTIG00000002680	-	99	87.218	ENSHBUG00000011969	gfi1ab	50	87.218	Haplochromis_burtoni
ENSPTIG00000002680	-	99	86.466	ENSHCOG00000019555	GFI1	52	86.466	Hippocampus_comes
ENSPTIG00000002680	-	87	79.167	ENSIPUG00000021407	-	52	79.167	Ictalurus_punctatus
ENSPTIG00000002680	-	84	100.000	ENSJJAG00000022622	-	100	100.000	Jaculus_jaculus
ENSPTIG00000002680	-	81	92.661	ENSLACG00000017590	-	51	92.661	Latimeria_chalumnae
ENSPTIG00000002680	-	99	88.722	ENSMMUG00000005068	GFI1	99	88.722	Macaca_mulatta
ENSPTIG00000002680	-	99	88.722	ENSMAUG00000021273	-	99	88.722	Mesocricetus_auratus
ENSPTIG00000002680	-	99	88.722	ENSMOCG00000004478	-	99	88.722	Microtus_ochrogaster
ENSPTIG00000002680	-	99	88.722	MGP_CAROLIEiJ_G0027508	Gfi1	99	88.722	Mus_caroli
ENSPTIG00000002680	-	99	88.722	MGP_PahariEiJ_G0017280	Gfi1	99	88.722	Mus_pahari
ENSPTIG00000002680	-	99	88.722	ENSNGAG00000002549	-	99	88.722	Nannospalax_galili
ENSPTIG00000002680	-	81	79.817	ENSNBRG00000001834	-	94	79.817	Neolamprologus_brichardi
ENSPTIG00000002680	-	81	82.727	ENSNBRG00000010351	-	88	82.727	Neolamprologus_brichardi
ENSPTIG00000002680	-	99	88.722	ENSODEG00000006410	-	99	88.722	Octodon_degus
ENSPTIG00000002680	-	98	88.636	ENSOANG00000022289	-	77	88.636	Ornithorhynchus_anatinus
ENSPTIG00000002680	-	99	86.466	ENSORLG00020002817	GFI1	52	86.466	Oryzias_latipes_hni
ENSPTIG00000002680	-	96	85.385	ENSPMGG00000011041	GFI1	53	85.385	Periophthalmus_magnuspinnatus
ENSPTIG00000002680	-	99	87.218	ENSPLAG00000010879	gfi1ab	52	87.218	Poecilia_latipinna
ENSPTIG00000002680	-	83	82.143	ENSPNYG00000001775	-	88	82.143	Pundamilia_nyererei
ENSPTIG00000002680	-	81	82.727	ENSPNAG00000014299	-	54	82.727	Pygocentrus_nattereri
ENSPTIG00000002680	-	84	83.186	ENSSFOG00015008114	-	52	83.186	Scleropages_formosus
ENSPTIG00000002680	-	87	76.923	ENSSLDG00000017614	-	88	76.923	Seriola_lalandi_dorsalis
ENSPTIG00000002680	-	99	87.218	ENSSPAG00000009140	gfi1ab	54	87.218	Stegastes_partitus
ENSPTIG00000002680	-	99	88.722	ENSUMAG00000011251	-	99	88.722	Ursus_maritimus
ENSPTIG00000002680	-	92	85.600	ENSXCOG00000009186	-	100	85.600	Xiphophorus_couchianus
ENSPTIG00000002680	-	90	74.380	ENSXCOG00000013213	-	51	74.380	Xiphophorus_couchianus
ENSPTIG00000002680	-	95	79.817	ENSXMAG00000006527	-	55	79.817	Xiphophorus_maculatus