EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000003974 (Gene tree)
Gene ID: 102965199
Gene Symbol: CELF1
Alias: -
Full Name: CUGBP Elav-like family member 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 37084 bases
Position: chrKE721762.1:1769538-1806621
Accession: 102965199
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000001644	RRM_1	PF00076.22	2e-52	1	3
ENSPTIP00000001644	RRM_1	PF00076.22	2e-52	2	3
ENSPTIP00000001644	RRM_1	PF00076.22	2e-52	3	3
ENSPTIP00000001650	RRM_1	PF00076.22	2.4e-52	1	3
ENSPTIP00000001650	RRM_1	PF00076.22	2.4e-52	2	3
ENSPTIP00000001650	RRM_1	PF00076.22	2.4e-52	3	3
ENSPTIP00000001642	RRM_1	PF00076.22	2.4e-52	1	3
ENSPTIP00000001642	RRM_1	PF00076.22	2.4e-52	2	3
ENSPTIP00000001642	RRM_1	PF00076.22	2.4e-52	3	3
ENSPTIP00000001654	RRM_1	PF00076.22	2.4e-52	1	3
ENSPTIP00000001654	RRM_1	PF00076.22	2.4e-52	2	3
ENSPTIP00000001654	RRM_1	PF00076.22	2.4e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000004686	CELF1-202	4161	XM_007082159	ENSPTIP00000001644	486 (aa)	XP_007082221	UPI0000EB16DF
ENSPTIT00000004705	CELF1-203	4066	XM_015537554	ENSPTIP00000001650	512 (aa)	XP_015393040	UPI000214A44E
ENSPTIT00000004711	CELF1-204	4430	XM_007082157	ENSPTIP00000001654	513 (aa)	XP_007082219	UPI00004BCD49
ENSPTIT00000004677	CELF1-201	5551	XM_015537553	ENSPTIP00000001642	513 (aa)	XP_015393039	UPI00004BCD49

Gene Model

Click here to download ENSPTIG00000003974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000003974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000003974	CELF1	50	38.158	ENSPTIG00000017925	RBMS2	50	38.158
ENSPTIG00000003974	CELF1	56	43.548	ENSPTIG00000013610	ELAVL3	70	42.105
ENSPTIG00000003974	CELF1	70	38.636	ENSPTIG00000005829	PABPC4	53	38.889
ENSPTIG00000003974	CELF1	62	36.232	ENSPTIG00000010106	PABPC4L	56	36.232
ENSPTIG00000003974	CELF1	55	45.679	ENSPTIG00000013602	ELAVL1	83	45.679
ENSPTIG00000003974	CELF1	97	73.318	ENSPTIG00000019418	CELF2	87	72.422
ENSPTIG00000003974	CELF1	69	41.975	ENSPTIG00000005627	ELAVL2	79	41.975
ENSPTIG00000003974	CELF1	83	34.053	ENSPTIG00000005338	CELF5	58	49.573
ENSPTIG00000003974	CELF1	97	47.082	ENSPTIG00000013450	CELF3	70	75.269
ENSPTIG00000003974	CELF1	61	40.741	ENSPTIG00000016727	ELAVL4	76	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000003974	CELF1	100	99.609	ENSG00000149187	CELF1	100	100.000	Homo_sapiens
ENSPTIG00000003974	CELF1	100	84.178	ENSAPOG00000024000	celf1	100	85.193	Acanthochromis_polyacanthus
ENSPTIG00000003974	CELF1	100	99.805	ENSAMEG00000007596	CELF1	100	99.805	Ailuropoda_melanoleuca
ENSPTIG00000003974	CELF1	100	82.172	ENSACIG00000023843	celf1	100	80.943	Amphilophus_citrinellus
ENSPTIG00000003974	CELF1	100	84.178	ENSAOCG00000001252	celf1	100	85.193	Amphiprion_ocellaris
ENSPTIG00000003974	CELF1	100	84.381	ENSAPEG00000002340	celf1	100	85.462	Amphiprion_percula
ENSPTIG00000003974	CELF1	100	83.162	ENSATEG00000010871	celf1	100	82.136	Anabas_testudineus
ENSPTIG00000003974	CELF1	100	95.697	ENSACAG00000002114	CELF1	100	94.932	Anolis_carolinensis
ENSPTIG00000003974	CELF1	100	99.610	ENSANAG00000031770	CELF1	100	99.610	Aotus_nancymaae
ENSPTIG00000003974	CELF1	100	85.409	ENSACLG00000010181	-	100	85.409	Astatotilapia_calliptera
ENSPTIG00000003974	CELF1	100	82.143	ENSAMXG00000020576	celf1	96	81.453	Astyanax_mexicanus
ENSPTIG00000003974	CELF1	100	99.220	ENSBTAG00000002520	CELF1	100	99.220	Bos_taurus
ENSPTIG00000003974	CELF1	100	99.416	ENSCJAG00000020133	CELF1	100	99.416	Callithrix_jacchus
ENSPTIG00000003974	CELF1	100	100.000	ENSCAFG00000008452	CELF1	100	100.000	Canis_familiaris
ENSPTIG00000003974	CELF1	100	100.000	ENSCAFG00020025487	CELF1	100	100.000	Canis_lupus_dingo
ENSPTIG00000003974	CELF1	100	99.415	ENSCHIG00000024582	CELF1	100	99.415	Capra_hircus
ENSPTIG00000003974	CELF1	100	99.609	ENSTSYG00000003866	CELF1	100	99.609	Carlito_syrichta
ENSPTIG00000003974	CELF1	99	73.125	ENSCAPG00000006787	CELF1	100	71.595	Cavia_aperea
ENSPTIG00000003974	CELF1	100	99.589	ENSCPOG00000036381	CELF1	100	99.589	Cavia_porcellus
ENSPTIG00000003974	CELF1	100	99.588	ENSCCAG00000033487	CELF1	100	99.588	Cebus_capucinus
ENSPTIG00000003974	CELF1	100	99.588	ENSCATG00000040143	CELF1	100	99.588	Cercocebus_atys
ENSPTIG00000003974	CELF1	100	99.588	ENSCLAG00000011791	CELF1	100	99.415	Chinchilla_lanigera
ENSPTIG00000003974	CELF1	100	99.415	ENSCSAG00000005786	CELF1	100	99.415	Chlorocebus_sabaeus
ENSPTIG00000003974	CELF1	62	100.000	ENSCHOG00000004196	-	68	100.000	Choloepus_hoffmanni
ENSPTIG00000003974	CELF1	100	97.131	ENSCPBG00000022914	CELF1	100	96.933	Chrysemys_picta_bellii
ENSPTIG00000003974	CELF1	100	99.609	ENSCANG00000032689	CELF1	100	99.609	Colobus_angolensis_palliatus
ENSPTIG00000003974	CELF1	100	99.025	ENSCGRG00001011274	Celf1	100	99.025	Cricetulus_griseus_chok1gshd
ENSPTIG00000003974	CELF1	100	99.025	ENSCGRG00000015357	Celf1	100	99.025	Cricetulus_griseus_crigri
ENSPTIG00000003974	CELF1	100	74.538	ENSCSEG00000008675	celf1	100	73.511	Cynoglossus_semilaevis
ENSPTIG00000003974	CELF1	100	83.004	ENSDARG00000005315	celf1	100	88.757	Danio_rerio
ENSPTIG00000003974	CELF1	100	99.610	ENSDNOG00000009523	CELF1	100	99.588	Dasypus_novemcinctus
ENSPTIG00000003974	CELF1	100	88.499	ENSDORG00000013721	Celf1	100	88.499	Dipodomys_ordii
ENSPTIG00000003974	CELF1	73	100.000	ENSETEG00000004507	CELF1	83	100.000	Echinops_telfairi
ENSPTIG00000003974	CELF1	100	92.593	ENSEASG00005010831	CELF1	100	92.203	Equus_asinus_asinus
ENSPTIG00000003974	CELF1	100	100.000	ENSECAG00000007741	CELF1	100	99.220	Equus_caballus
ENSPTIG00000003974	CELF1	100	81.276	ENSEEUG00000009782	CELF1	100	81.276	Erinaceus_europaeus
ENSPTIG00000003974	CELF1	100	83.573	ENSELUG00000023173	celf1	100	83.333	Esox_lucius
ENSPTIG00000003974	CELF1	100	100.000	ENSFCAG00000002535	CELF1	100	100.000	Felis_catus
ENSPTIG00000003974	CELF1	100	95.736	ENSFALG00000006402	CELF1	100	95.736	Ficedula_albicollis
ENSPTIG00000003974	CELF1	100	99.177	ENSFDAG00000008517	CELF1	100	98.973	Fukomys_damarensis
ENSPTIG00000003974	CELF1	100	83.673	ENSGMOG00000012783	celf1	99	83.130	Gadus_morhua
ENSPTIG00000003974	CELF1	100	96.124	ENSGALG00000008097	CELF1	100	96.124	Gallus_gallus
ENSPTIG00000003974	CELF1	100	78.373	ENSGACG00000014226	celf1	95	78.261	Gasterosteus_aculeatus
ENSPTIG00000003974	CELF1	100	97.131	ENSGAGG00000011562	CELF1	100	96.311	Gopherus_agassizii
ENSPTIG00000003974	CELF1	100	99.416	ENSGGOG00000004106	CELF1	100	99.416	Gorilla_gorilla
ENSPTIG00000003974	CELF1	100	85.409	ENSHBUG00000017881	celf1	100	85.409	Haplochromis_burtoni
ENSPTIG00000003974	CELF1	100	99.179	ENSHGLG00000006909	-	100	99.179	Heterocephalus_glaber_female
ENSPTIG00000003974	CELF1	100	90.965	ENSHGLG00000019214	-	100	90.554	Heterocephalus_glaber_female
ENSPTIG00000003974	CELF1	100	99.179	ENSHGLG00100013863	-	100	99.179	Heterocephalus_glaber_male
ENSPTIG00000003974	CELF1	100	94.045	ENSHGLG00100017423	-	100	93.634	Heterocephalus_glaber_male
ENSPTIG00000003974	CELF1	100	85.451	ENSHCOG00000000258	celf1	100	84.836	Hippocampus_comes
ENSPTIG00000003974	CELF1	100	81.980	ENSIPUG00000023708	celf1	100	82.376	Ictalurus_punctatus
ENSPTIG00000003974	CELF1	100	99.588	ENSSTOG00000000613	CELF1	100	99.415	Ictidomys_tridecemlineatus
ENSPTIG00000003974	CELF1	100	99.610	ENSJJAG00000020280	Celf1	100	99.610	Jaculus_jaculus
ENSPTIG00000003974	CELF1	70	85.546	ENSLBEG00000002047	-	98	83.776	Labrus_bergylta
ENSPTIG00000003974	CELF1	100	86.653	ENSLBEG00000018296	celf1	93	85.484	Labrus_bergylta
ENSPTIG00000003974	CELF1	71	81.522	ENSLACG00000018990	CELF1	92	81.793	Latimeria_chalumnae
ENSPTIG00000003974	CELF1	100	86.653	ENSLOCG00000005966	celf1	95	86.139	Lepisosteus_oculatus
ENSPTIG00000003974	CELF1	100	99.588	ENSLAFG00000003484	CELF1	100	99.220	Loxodonta_africana
ENSPTIG00000003974	CELF1	100	99.384	ENSMFAG00000003505	CELF1	100	99.384	Macaca_fascicularis
ENSPTIG00000003974	CELF1	100	99.609	ENSMMUG00000011657	CELF1	100	99.609	Macaca_mulatta
ENSPTIG00000003974	CELF1	100	99.588	ENSMNEG00000022558	CELF1	100	99.588	Macaca_nemestrina
ENSPTIG00000003974	CELF1	100	99.610	ENSMLEG00000040834	CELF1	100	99.610	Mandrillus_leucophaeus
ENSPTIG00000003974	CELF1	100	82.992	ENSMAMG00000010052	celf1	100	81.557	Mastacembelus_armatus
ENSPTIG00000003974	CELF1	100	85.409	ENSMZEG00005018307	celf1	100	85.409	Maylandia_zebra
ENSPTIG00000003974	CELF1	100	95.918	ENSMGAG00000010629	CELF1	98	94.059	Meleagris_gallopavo
ENSPTIG00000003974	CELF1	100	99.025	ENSMAUG00000009468	Celf1	100	99.025	Mesocricetus_auratus
ENSPTIG00000003974	CELF1	100	99.416	ENSMICG00000045113	CELF1	100	99.416	Microcebus_murinus
ENSPTIG00000003974	CELF1	100	99.220	ENSMOCG00000012633	Celf1	100	99.220	Microtus_ochrogaster
ENSPTIG00000003974	CELF1	100	82.582	ENSMMOG00000015460	celf1	95	82.582	Mola_mola
ENSPTIG00000003974	CELF1	100	97.942	ENSMODG00000019913	CELF1	100	97.942	Monodelphis_domestica
ENSPTIG00000003974	CELF1	100	99.220	MGP_CAROLIEiJ_G0023949	Celf1	100	99.220	Mus_caroli
ENSPTIG00000003974	CELF1	100	99.220	ENSMUSG00000005506	Celf1	100	99.220	Mus_musculus
ENSPTIG00000003974	CELF1	100	99.220	MGP_PahariEiJ_G0025385	Celf1	100	99.220	Mus_pahari
ENSPTIG00000003974	CELF1	100	99.025	MGP_SPRETEiJ_G0024859	Celf1	100	99.025	Mus_spretus
ENSPTIG00000003974	CELF1	100	100.000	ENSMPUG00000003960	CELF1	93	100.000	Mustela_putorius_furo
ENSPTIG00000003974	CELF1	100	98.646	ENSMLUG00000016631	CELF1	100	98.646	Myotis_lucifugus
ENSPTIG00000003974	CELF1	100	97.661	ENSNGAG00000017390	Celf1	100	97.661	Nannospalax_galili
ENSPTIG00000003974	CELF1	99	55.488	ENSNBRG00000023547	-	85	55.144	Neolamprologus_brichardi
ENSPTIG00000003974	CELF1	100	99.609	ENSNLEG00000014638	CELF1	100	99.609	Nomascus_leucogenys
ENSPTIG00000003974	CELF1	100	97.737	ENSMEUG00000007763	CELF1	100	97.737	Notamacropus_eugenii
ENSPTIG00000003974	CELF1	100	98.765	ENSOPRG00000003239	-	100	98.765	Ochotona_princeps
ENSPTIG00000003974	CELF1	100	99.588	ENSODEG00000015204	CELF1	100	99.415	Octodon_degus
ENSPTIG00000003974	CELF1	100	84.660	ENSONIG00000008300	celf1	100	84.660	Oreochromis_niloticus
ENSPTIG00000003974	CELF1	100	97.741	ENSOANG00000007896	CELF1	99	97.276	Ornithorhynchus_anatinus
ENSPTIG00000003974	CELF1	100	99.177	ENSOCUG00000001311	CELF1	100	99.025	Oryctolagus_cuniculus
ENSPTIG00000003974	CELF1	100	79.346	ENSOMEG00000002381	celf1	100	79.141	Oryzias_melastigma
ENSPTIG00000003974	CELF1	100	98.453	ENSOGAG00000011600	CELF1	100	98.453	Otolemur_garnettii
ENSPTIG00000003974	CELF1	100	99.383	ENSOARG00000006924	CELF1	100	99.383	Ovis_aries
ENSPTIG00000003974	CELF1	100	99.588	ENSPPAG00000033870	CELF1	100	99.588	Pan_paniscus
ENSPTIG00000003974	CELF1	100	100.000	ENSPPRG00000002376	CELF1	100	100.000	Panthera_pardus
ENSPTIG00000003974	CELF1	100	99.416	ENSPTRG00000052299	CELF1	100	99.416	Pan_troglodytes
ENSPTIG00000003974	CELF1	100	99.416	ENSPANG00000021676	CELF1	100	99.416	Papio_anubis
ENSPTIG00000003974	CELF1	100	86.885	ENSPKIG00000012324	celf1	100	85.861	Paramormyrops_kingsleyae
ENSPTIG00000003974	CELF1	100	94.683	ENSPSIG00000003922	CELF1	100	93.992	Pelodiscus_sinensis
ENSPTIG00000003974	CELF1	100	86.957	ENSPMGG00000013192	celf1	96	77.301	Periophthalmus_magnuspinnatus
ENSPTIG00000003974	CELF1	100	99.220	ENSPEMG00000015644	Celf1	100	99.220	Peromyscus_maniculatus_bairdii
ENSPTIG00000003974	CELF1	100	97.942	ENSPCIG00000022947	CELF1	100	97.809	Phascolarctos_cinereus
ENSPTIG00000003974	CELF1	70	70.118	ENSPFOG00000000961	-	100	67.456	Poecilia_formosa
ENSPTIG00000003974	CELF1	88	70.468	ENSPLAG00000019373	-	88	67.039	Poecilia_latipinna
ENSPTIG00000003974	CELF1	100	74.319	ENSPREG00000022185	-	100	72.266	Poecilia_reticulata
ENSPTIG00000003974	CELF1	100	98.638	ENSPPYG00000003302	CELF1	100	98.638	Pongo_abelii
ENSPTIG00000003974	CELF1	100	97.942	ENSPCAG00000002631	CELF1	100	97.942	Procavia_capensis
ENSPTIG00000003974	CELF1	100	94.747	ENSPCOG00000021865	CELF1	100	94.358	Propithecus_coquereli
ENSPTIG00000003974	CELF1	97	100.000	ENSPVAG00000007340	CELF1	100	100.000	Pteropus_vampyrus
ENSPTIG00000003974	CELF1	78	73.669	ENSPNYG00000023719	-	88	71.302	Pundamilia_nyererei
ENSPTIG00000003974	CELF1	100	82.376	ENSPNAG00000013418	celf1	96	82.061	Pygocentrus_nattereri
ENSPTIG00000003974	CELF1	100	98.768	ENSRNOG00000010379	Celf1	100	98.768	Rattus_norvegicus
ENSPTIG00000003974	CELF1	100	99.416	ENSRBIG00000042406	CELF1	100	99.416	Rhinopithecus_bieti
ENSPTIG00000003974	CELF1	100	99.610	ENSRROG00000032588	CELF1	100	99.610	Rhinopithecus_roxellana
ENSPTIG00000003974	CELF1	100	88.521	ENSSBOG00000021912	CELF1	100	88.521	Saimiri_boliviensis_boliviensis
ENSPTIG00000003974	CELF1	100	97.947	ENSSHAG00000017438	CELF1	100	97.947	Sarcophilus_harrisii
ENSPTIG00000003974	CELF1	100	87.910	ENSSFOG00015019353	celf1	97	85.069	Scleropages_formosus
ENSPTIG00000003974	CELF1	100	86.475	ENSSMAG00000013827	celf1	96	84.418	Scophthalmus_maximus
ENSPTIG00000003974	CELF1	100	85.861	ENSSDUG00000011558	celf1	96	83.826	Seriola_dumerili
ENSPTIG00000003974	CELF1	100	86.408	ENSSLDG00000012863	celf1	100	86.408	Seriola_lalandi_dorsalis
ENSPTIG00000003974	CELF1	100	94.033	ENSSARG00000003207	CELF1	100	94.033	Sorex_araneus
ENSPTIG00000003974	CELF1	100	96.728	ENSSPUG00000004228	CELF1	100	96.705	Sphenodon_punctatus
ENSPTIG00000003974	CELF1	100	84.178	ENSSPAG00000009569	celf1	100	85.193	Stegastes_partitus
ENSPTIG00000003974	CELF1	100	100.000	ENSSSCG00000013233	CELF1	100	100.000	Sus_scrofa
ENSPTIG00000003974	CELF1	100	96.721	ENSTGUG00000010377	CELF1	100	96.505	Taeniopygia_guttata
ENSPTIG00000003974	CELF1	100	66.871	ENSTRUG00000000617	celf1	100	66.871	Takifugu_rubripes
ENSPTIG00000003974	CELF1	83	99.338	ENSTBEG00000005140	CELF1	83	99.338	Tupaia_belangeri
ENSPTIG00000003974	CELF1	100	100.000	ENSTTRG00000014157	CELF1	100	100.000	Tursiops_truncatus
ENSPTIG00000003974	CELF1	90	100.000	ENSUAMG00000000223	CELF1	100	100.000	Ursus_americanus
ENSPTIG00000003974	CELF1	100	100.000	ENSUMAG00000009218	CELF1	100	100.000	Ursus_maritimus
ENSPTIG00000003974	CELF1	100	86.420	ENSVPAG00000000336	CELF1	100	86.420	Vicugna_pacos
ENSPTIG00000003974	CELF1	100	100.000	ENSVVUG00000023439	CELF1	100	100.000	Vulpes_vulpes
ENSPTIG00000003974	CELF1	100	87.928	ENSXETG00000009044	celf1	100	87.123	Xenopus_tropicalis
ENSPTIG00000003974	CELF1	87	59.882	ENSXCOG00000017706	-	87	60.117	Xiphophorus_couchianus
ENSPTIG00000003974	CELF1	100	73.101	ENSXMAG00000029339	-	100	71.869	Xiphophorus_maculatus