EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000004537 (Gene tree)
Gene ID: 102957664
Gene Symbol: SNRPN
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 13232 bases
Position: chrKE722366.1:4597793-4611024
Accession: 102957664
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000001797	LSM	PF01423.22	6.6e-20	1	1
ENSPTIP00000001775	LSM	PF01423.22	7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000005081	SNRPN-202	1382	XM_007098949	ENSPTIP00000001797	240 (aa)	XP_007099011	UPI00042BB3D1
ENSPTIT00000005043	SNRPN-201	1484	-	ENSPTIP00000001775	250 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000004537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000004537's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000004537	SNRPN	92	91.818	ENSPTIG00000007468	SNRPB	99	91.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000004537	SNRPN	100	99.167	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSPTIG00000004537	SNRPN	99	99.582	ENSAMEG00000007034	SNRPN	98	99.582	Ailuropoda_melanoleuca
ENSPTIG00000004537	SNRPN	100	99.167	ENSANAG00000034241	SNRPN	100	99.167	Aotus_nancymaae
ENSPTIG00000004537	SNRPN	100	98.750	ENSBTAG00000008251	SNRPN	100	98.750	Bos_taurus
ENSPTIG00000004537	SNRPN	95	98.684	ENSCJAG00000042622	-	96	97.826	Callithrix_jacchus
ENSPTIG00000004537	SNRPN	100	99.167	ENSCJAG00000003759	-	100	99.167	Callithrix_jacchus
ENSPTIG00000004537	SNRPN	100	99.583	ENSCAFG00000010127	SNRPN	100	99.583	Canis_familiaris
ENSPTIG00000004537	SNRPN	100	99.583	ENSCAFG00020024075	SNRPN	100	99.583	Canis_lupus_dingo
ENSPTIG00000004537	SNRPN	100	98.750	ENSCHIG00000017477	SNRPN	100	98.750	Capra_hircus
ENSPTIG00000004537	SNRPN	100	99.167	ENSTSYG00000005248	SNRPN	100	99.167	Carlito_syrichta
ENSPTIG00000004537	SNRPN	100	99.167	ENSCAPG00000003047	SNRPN	100	99.167	Cavia_aperea
ENSPTIG00000004537	SNRPN	100	99.167	ENSCPOG00000020270	SNRPN	100	99.167	Cavia_porcellus
ENSPTIG00000004537	SNRPN	100	99.167	ENSCCAG00000024231	SNRPN	100	99.167	Cebus_capucinus
ENSPTIG00000004537	SNRPN	100	99.167	ENSCATG00000032518	SNRPN	100	99.167	Cercocebus_atys
ENSPTIG00000004537	SNRPN	100	99.167	ENSCLAG00000011376	SNRPN	100	99.167	Chinchilla_lanigera
ENSPTIG00000004537	SNRPN	100	99.167	ENSCSAG00000006406	SNRPN	100	99.167	Chlorocebus_sabaeus
ENSPTIG00000004537	SNRPN	98	97.863	ENSCHOG00000001846	SNRPN	88	97.863	Choloepus_hoffmanni
ENSPTIG00000004537	SNRPN	100	99.167	ENSCANG00000041156	SNRPN	100	99.167	Colobus_angolensis_palliatus
ENSPTIG00000004537	SNRPN	100	98.750	ENSCGRG00001004136	Snrpn	100	98.750	Cricetulus_griseus_chok1gshd
ENSPTIG00000004537	SNRPN	100	98.333	ENSCGRG00000001621	Snrpn	100	98.333	Cricetulus_griseus_crigri
ENSPTIG00000004537	SNRPN	72	92.486	ENSCVAG00000014193	SNRPN	61	96.622	Cyprinodon_variegatus
ENSPTIG00000004537	SNRPN	99	98.326	ENSDNOG00000037060	SNRPN	98	98.326	Dasypus_novemcinctus
ENSPTIG00000004537	SNRPN	100	98.750	ENSDORG00000004527	Snrpn	100	98.750	Dipodomys_ordii
ENSPTIG00000004537	SNRPN	100	99.583	ENSEASG00005017871	SNRPN	100	99.583	Equus_asinus_asinus
ENSPTIG00000004537	SNRPN	100	99.583	ENSECAG00000018148	SNRPN	100	99.583	Equus_caballus
ENSPTIG00000004537	SNRPN	99	98.745	ENSEEUG00000007440	-	100	98.745	Erinaceus_europaeus
ENSPTIG00000004537	SNRPN	100	99.583	ENSFCAG00000022298	-	100	99.583	Felis_catus
ENSPTIG00000004537	SNRPN	100	98.750	ENSFDAG00000016578	-	100	98.750	Fukomys_damarensis
ENSPTIG00000004537	SNRPN	76	85.246	ENSFDAG00000010528	-	86	82.796	Fukomys_damarensis
ENSPTIG00000004537	SNRPN	100	99.167	ENSGGOG00000003988	SNRPN	100	99.167	Gorilla_gorilla
ENSPTIG00000004537	SNRPN	90	73.023	ENSGGOG00000024469	-	69	83.942	Gorilla_gorilla
ENSPTIG00000004537	SNRPN	89	89.671	ENSHGLG00000019812	-	89	91.080	Heterocephalus_glaber_female
ENSPTIG00000004537	SNRPN	100	99.167	ENSHGLG00000011924	SNRPN	100	99.167	Heterocephalus_glaber_female
ENSPTIG00000004537	SNRPN	100	84.583	ENSHGLG00000002327	-	95	84.716	Heterocephalus_glaber_female
ENSPTIG00000004537	SNRPN	90	80.930	ENSHGLG00000020936	-	88	81.221	Heterocephalus_glaber_female
ENSPTIG00000004537	SNRPN	100	82.917	ENSHGLG00100004881	-	95	81.659	Heterocephalus_glaber_male
ENSPTIG00000004537	SNRPN	89	89.671	ENSHGLG00100021056	-	89	91.080	Heterocephalus_glaber_male
ENSPTIG00000004537	SNRPN	100	99.167	ENSHGLG00100016559	SNRPN	100	99.167	Heterocephalus_glaber_male
ENSPTIG00000004537	SNRPN	100	99.167	ENSSTOG00000001339	SNRPN	100	99.167	Ictidomys_tridecemlineatus
ENSPTIG00000004537	SNRPN	99	98.745	ENSLAFG00000009458	SNRPN	99	98.745	Loxodonta_africana
ENSPTIG00000004537	SNRPN	100	99.167	ENSMFAG00000042235	SNRPN	100	99.167	Macaca_fascicularis
ENSPTIG00000004537	SNRPN	100	99.167	ENSMMUG00000023139	SNURF	100	99.167	Macaca_mulatta
ENSPTIG00000004537	SNRPN	100	99.167	ENSMNEG00000031291	SNRPN	100	99.167	Macaca_nemestrina
ENSPTIG00000004537	SNRPN	100	99.167	ENSMLEG00000038837	SNRPN	100	99.167	Mandrillus_leucophaeus
ENSPTIG00000004537	SNRPN	92	85.000	ENSMGAG00000008696	SNRPN	95	85.088	Meleagris_gallopavo
ENSPTIG00000004537	SNRPN	100	99.167	ENSMAUG00000000051	Snrpn	100	99.167	Mesocricetus_auratus
ENSPTIG00000004537	SNRPN	100	99.167	ENSMICG00000042356	SNRPN	100	99.167	Microcebus_murinus
ENSPTIG00000004537	SNRPN	100	99.167	ENSMOCG00000015350	Snrpn	100	99.167	Microtus_ochrogaster
ENSPTIG00000004537	SNRPN	92	93.213	ENSMODG00000013926	-	95	93.013	Monodelphis_domestica
ENSPTIG00000004537	SNRPN	100	99.167	MGP_CAROLIEiJ_G0029815	Snrpn	100	99.167	Mus_caroli
ENSPTIG00000004537	SNRPN	100	99.167	ENSMUSG00000102252	Snrpn	100	99.167	Mus_musculus
ENSPTIG00000004537	SNRPN	100	99.167	MGP_PahariEiJ_G0013040	Snrpn	100	99.167	Mus_pahari
ENSPTIG00000004537	SNRPN	100	99.167	MGP_SPRETEiJ_G0030918	Snrpn	100	99.167	Mus_spretus
ENSPTIG00000004537	SNRPN	100	99.583	ENSMPUG00000014638	-	100	99.583	Mustela_putorius_furo
ENSPTIG00000004537	SNRPN	88	50.711	ENSMPUG00000007115	-	64	70.423	Mustela_putorius_furo
ENSPTIG00000004537	SNRPN	99	99.163	ENSMLUG00000023361	-	98	99.163	Myotis_lucifugus
ENSPTIG00000004537	SNRPN	85	60.294	ENSMLUG00000025849	-	58	69.841	Myotis_lucifugus
ENSPTIG00000004537	SNRPN	95	61.842	ENSMLUG00000024428	-	64	70.504	Myotis_lucifugus
ENSPTIG00000004537	SNRPN	100	99.167	ENSNGAG00000000181	Snrpn	100	99.167	Nannospalax_galili
ENSPTIG00000004537	SNRPN	100	82.917	ENSNLEG00000001376	SNRPN	99	82.917	Nomascus_leucogenys
ENSPTIG00000004537	SNRPN	100	98.750	ENSODEG00000013478	-	100	98.750	Octodon_degus
ENSPTIG00000004537	SNRPN	98	81.197	ENSODEG00000016065	-	87	82.126	Octodon_degus
ENSPTIG00000004537	SNRPN	100	95.000	ENSODEG00000019708	-	97	97.826	Octodon_degus
ENSPTIG00000004537	SNRPN	100	98.333	ENSODEG00000020110	-	100	98.333	Octodon_degus
ENSPTIG00000004537	SNRPN	100	98.755	ENSOCUG00000003532	-	100	98.755	Oryctolagus_cuniculus
ENSPTIG00000004537	SNRPN	73	92.045	ENSORLG00020007490	SNRPN	69	94.643	Oryzias_latipes_hni
ENSPTIG00000004537	SNRPN	73	92.045	ENSORLG00015003332	SNRPN	69	94.643	Oryzias_latipes_hsok
ENSPTIG00000004537	SNRPN	73	92.614	ENSOMEG00000002066	SNRPN	69	95.238	Oryzias_melastigma
ENSPTIG00000004537	SNRPN	100	99.167	ENSOGAG00000007392	SNRPN	100	99.167	Otolemur_garnettii
ENSPTIG00000004537	SNRPN	100	98.750	ENSOARG00000009080	SNRPN	100	98.750	Ovis_aries
ENSPTIG00000004537	SNRPN	100	99.167	ENSPPAG00000027650	SNRPN	100	99.167	Pan_paniscus
ENSPTIG00000004537	SNRPN	97	68.803	ENSPPAG00000034049	-	86	71.770	Pan_paniscus
ENSPTIG00000004537	SNRPN	100	99.583	ENSPPRG00000019878	-	100	99.583	Panthera_pardus
ENSPTIG00000004537	SNRPN	85	63.902	ENSPPRG00000006957	-	73	70.199	Panthera_pardus
ENSPTIG00000004537	SNRPN	97	69.231	ENSPTRG00000052400	-	65	80.420	Pan_troglodytes
ENSPTIG00000004537	SNRPN	100	99.167	ENSPTRG00000006826	SNRPN	100	99.167	Pan_troglodytes
ENSPTIG00000004537	SNRPN	100	99.167	ENSPANG00000020142	SNRPN	100	99.167	Papio_anubis
ENSPTIG00000004537	SNRPN	100	99.167	ENSPEMG00000012911	-	100	99.167	Peromyscus_maniculatus_bairdii
ENSPTIG00000004537	SNRPN	92	85.973	ENSPEMG00000013920	-	95	86.900	Peromyscus_maniculatus_bairdii
ENSPTIG00000004537	SNRPN	95	94.737	ENSPEMG00000020979	-	95	94.737	Peromyscus_maniculatus_bairdii
ENSPTIG00000004537	SNRPN	92	94.091	ENSPCIG00000004699	-	73	93.860	Phascolarctos_cinereus
ENSPTIG00000004537	SNRPN	72	93.642	ENSPMEG00000020674	SNRPN	69	94.643	Poecilia_mexicana
ENSPTIG00000004537	SNRPN	100	99.167	ENSPPYG00000006269	SNURF	100	99.167	Pongo_abelii
ENSPTIG00000004537	SNRPN	100	99.167	ENSPCOG00000014231	SNRPN	100	99.167	Propithecus_coquereli
ENSPTIG00000004537	SNRPN	100	99.167	ENSRNOG00000059764	Snrpn	100	99.167	Rattus_norvegicus
ENSPTIG00000004537	SNRPN	100	99.167	ENSRBIG00000041765	SNRPN	100	99.167	Rhinopithecus_bieti
ENSPTIG00000004537	SNRPN	100	99.167	ENSRROG00000035157	SNRPN	100	99.167	Rhinopithecus_roxellana
ENSPTIG00000004537	SNRPN	100	99.167	ENSSBOG00000000110	-	100	99.167	Saimiri_boliviensis_boliviensis
ENSPTIG00000004537	SNRPN	100	98.333	ENSSBOG00000024929	-	100	98.333	Saimiri_boliviensis_boliviensis
ENSPTIG00000004537	SNRPN	92	93.665	ENSSHAG00000010257	-	93	93.860	Sarcophilus_harrisii
ENSPTIG00000004537	SNRPN	99	77.824	ENSSARG00000000072	SNRPN	100	77.824	Sorex_araneus
ENSPTIG00000004537	SNRPN	100	99.167	ENSSSCG00000028124	SNRPN	100	99.167	Sus_scrofa
ENSPTIG00000004537	SNRPN	100	98.750	ENSTTRG00000010966	SNRPN	89	98.750	Tursiops_truncatus
ENSPTIG00000004537	SNRPN	98	97.541	ENSUAMG00000016284	SNRPN	85	97.541	Ursus_americanus
ENSPTIG00000004537	SNRPN	100	99.583	ENSUMAG00000025589	SNRPN	100	99.583	Ursus_maritimus
ENSPTIG00000004537	SNRPN	95	99.563	ENSVVUG00000017971	SNRPN	99	97.510	Vulpes_vulpes