EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000004613 (Gene tree)
Gene ID: 102960471
Gene Symbol: LSM10
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 372 bases
Position: chrKE721996.1:5741338-5741709
Accession: 102960471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000001798	LSM	PF01423.22	5.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000005082	LSM10-201	372	XM_007092476	ENSPTIP00000001798	123 (aa)	XP_007092538	UPI00042B9765

Gene Model

Click here to download ENSPTIG00000004613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000004613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000004613	LSM10	55	30.000	ENSPTIG00000010303	LSM2	74	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000004613	LSM10	100	91.870	ENSG00000181817	LSM10	100	91.870	Homo_sapiens
ENSPTIG00000004613	LSM10	100	94.309	ENSAMEG00000019854	LSM10	100	94.309	Ailuropoda_melanoleuca
ENSPTIG00000004613	LSM10	94	68.103	ENSACIG00000015420	oscp1a	77	68.103	Amphilophus_citrinellus
ENSPTIG00000004613	LSM10	96	68.644	ENSAOCG00000015618	LSM10	98	68.644	Amphiprion_ocellaris
ENSPTIG00000004613	LSM10	96	68.644	ENSAOCG00000014654	-	98	68.644	Amphiprion_ocellaris
ENSPTIG00000004613	LSM10	90	66.667	ENSAOCG00000015607	LSM10	86	66.667	Amphiprion_ocellaris
ENSPTIG00000004613	LSM10	90	66.667	ENSAPEG00000021851	LSM10	86	66.667	Amphiprion_percula
ENSPTIG00000004613	LSM10	96	68.644	ENSAPEG00000021845	-	98	68.644	Amphiprion_percula
ENSPTIG00000004613	LSM10	94	62.069	ENSATEG00000006310	oscp1a	86	62.069	Anabas_testudineus
ENSPTIG00000004613	LSM10	100	68.293	ENSACAG00000001231	LSM10	100	68.293	Anolis_carolinensis
ENSPTIG00000004613	LSM10	98	92.500	ENSANAG00000031489	-	98	92.500	Aotus_nancymaae
ENSPTIG00000004613	LSM10	100	92.683	ENSANAG00000018759	-	100	92.683	Aotus_nancymaae
ENSPTIG00000004613	LSM10	96	66.949	ENSACLG00000004728	oscp1a	96	66.949	Astatotilapia_calliptera
ENSPTIG00000004613	LSM10	96	68.644	ENSAMXG00000025301	oscp1a	98	68.644	Astyanax_mexicanus
ENSPTIG00000004613	LSM10	98	93.333	ENSBTAG00000024096	LSM10	98	93.333	Bos_taurus
ENSPTIG00000004613	LSM10	100	91.870	ENSCJAG00000044880	LSM10	100	91.870	Callithrix_jacchus
ENSPTIG00000004613	LSM10	100	97.561	ENSCAFG00000003382	LSM10	100	97.561	Canis_familiaris
ENSPTIG00000004613	LSM10	100	97.561	ENSCAFG00020008920	LSM10	100	97.561	Canis_lupus_dingo
ENSPTIG00000004613	LSM10	98	93.333	ENSCHIG00000009398	LSM10	98	93.333	Capra_hircus
ENSPTIG00000004613	LSM10	100	92.683	ENSCAPG00000012567	LSM10	100	92.683	Cavia_aperea
ENSPTIG00000004613	LSM10	100	92.683	ENSCPOG00000039302	LSM10	100	92.683	Cavia_porcellus
ENSPTIG00000004613	LSM10	98	92.500	ENSCCAG00000008378	-	98	92.500	Cebus_capucinus
ENSPTIG00000004613	LSM10	100	92.683	ENSCCAG00000018913	-	100	92.683	Cebus_capucinus
ENSPTIG00000004613	LSM10	100	92.683	ENSCATG00000006589	LSM10	100	92.683	Cercocebus_atys
ENSPTIG00000004613	LSM10	100	95.122	ENSCLAG00000008633	LSM10	100	95.122	Chinchilla_lanigera
ENSPTIG00000004613	LSM10	100	92.683	ENSCSAG00000000134	LSM10	100	92.683	Chlorocebus_sabaeus
ENSPTIG00000004613	LSM10	100	92.000	ENSCHOG00000008615	LSM10	100	92.000	Choloepus_hoffmanni
ENSPTIG00000004613	LSM10	83	31.373	ENSCSAVG00000001896	-	87	31.373	Ciona_savignyi
ENSPTIG00000004613	LSM10	100	92.683	ENSCANG00000019928	LSM10	100	92.683	Colobus_angolensis_palliatus
ENSPTIG00000004613	LSM10	98	95.041	ENSCGRG00001004317	-	99	95.041	Cricetulus_griseus_chok1gshd
ENSPTIG00000004613	LSM10	93	85.470	ENSCGRG00001022673	-	94	85.470	Cricetulus_griseus_chok1gshd
ENSPTIG00000004613	LSM10	93	85.470	ENSCGRG00000015514	-	94	85.470	Cricetulus_griseus_crigri
ENSPTIG00000004613	LSM10	98	95.041	ENSCGRG00000014935	-	99	95.041	Cricetulus_griseus_crigri
ENSPTIG00000004613	LSM10	96	63.559	ENSCSEG00000010374	oscp1a	79	63.559	Cynoglossus_semilaevis
ENSPTIG00000004613	LSM10	97	65.546	ENSCVAG00000001536	oscp1a	90	65.546	Cyprinodon_variegatus
ENSPTIG00000004613	LSM10	98	71.901	ENSDARG00000101222	oscp1a	100	71.901	Danio_rerio
ENSPTIG00000004613	LSM10	69	71.765	ENSDARG00000109563	CABZ01074453.1	99	71.765	Danio_rerio
ENSPTIG00000004613	LSM10	99	96.721	ENSDNOG00000036662	LSM10	99	96.721	Dasypus_novemcinctus
ENSPTIG00000004613	LSM10	100	94.309	ENSDORG00000007579	Lsm10	100	94.309	Dipodomys_ordii
ENSPTIG00000004613	LSM10	100	91.870	ENSETEG00000005703	LSM10	100	91.870	Echinops_telfairi
ENSPTIG00000004613	LSM10	95	52.991	ENSEBUG00000001312	oscp1a	96	52.991	Eptatretus_burgeri
ENSPTIG00000004613	LSM10	100	97.561	ENSEASG00005012194	LSM10	100	97.561	Equus_asinus_asinus
ENSPTIG00000004613	LSM10	100	98.374	ENSECAG00000005071	LSM10	100	98.374	Equus_caballus
ENSPTIG00000004613	LSM10	100	95.935	ENSEEUG00000012032	LSM10	100	95.935	Erinaceus_europaeus
ENSPTIG00000004613	LSM10	98	68.595	ENSELUG00000007452	oscp1a	99	68.595	Esox_lucius
ENSPTIG00000004613	LSM10	100	72.358	ENSFALG00000000851	LSM10	100	72.358	Ficedula_albicollis
ENSPTIG00000004613	LSM10	100	91.870	ENSFDAG00000021056	LSM10	100	91.870	Fukomys_damarensis
ENSPTIG00000004613	LSM10	89	67.273	ENSFHEG00000001058	oscp1a	95	67.273	Fundulus_heteroclitus
ENSPTIG00000004613	LSM10	86	66.981	ENSGMOG00000019832	oscp1a	89	66.981	Gadus_morhua
ENSPTIG00000004613	LSM10	100	75.610	ENSGALG00000002127	LSM10	100	75.610	Gallus_gallus
ENSPTIG00000004613	LSM10	91	60.870	ENSGAFG00000016445	oscp1a	93	60.870	Gambusia_affinis
ENSPTIG00000004613	LSM10	96	64.407	ENSGACG00000002329	oscp1a	97	64.407	Gasterosteus_aculeatus
ENSPTIG00000004613	LSM10	100	73.171	ENSGAGG00000024848	LSM10	100	73.171	Gopherus_agassizii
ENSPTIG00000004613	LSM10	100	92.683	ENSGGOG00000003556	LSM10	100	92.683	Gorilla_gorilla
ENSPTIG00000004613	LSM10	96	66.949	ENSHBUG00000001722	oscp1a	96	66.949	Haplochromis_burtoni
ENSPTIG00000004613	LSM10	100	92.683	ENSHGLG00000011625	LSM10	100	92.683	Heterocephalus_glaber_female
ENSPTIG00000004613	LSM10	100	92.683	ENSHGLG00100001769	LSM10	100	92.683	Heterocephalus_glaber_male
ENSPTIG00000004613	LSM10	85	69.524	ENSIPUG00000005808	oscp1a	91	69.524	Ictalurus_punctatus
ENSPTIG00000004613	LSM10	100	95.122	ENSSTOG00000000606	LSM10	100	95.122	Ictidomys_tridecemlineatus
ENSPTIG00000004613	LSM10	98	65.289	ENSKMAG00000012143	oscp1a	99	65.289	Kryptolebias_marmoratus
ENSPTIG00000004613	LSM10	98	63.333	ENSLBEG00000017764	oscp1a	98	63.333	Labrus_bergylta
ENSPTIG00000004613	LSM10	100	75.610	ENSLACG00000015904	LSM10	95	75.610	Latimeria_chalumnae
ENSPTIG00000004613	LSM10	98	71.667	ENSLOCG00000018277	oscp1a	98	71.667	Lepisosteus_oculatus
ENSPTIG00000004613	LSM10	100	94.309	ENSLAFG00000009600	LSM10	100	94.309	Loxodonta_africana
ENSPTIG00000004613	LSM10	100	92.683	ENSMFAG00000009115	LSM10	100	92.683	Macaca_fascicularis
ENSPTIG00000004613	LSM10	100	92.683	ENSMMUG00000017338	LSM10	100	92.683	Macaca_mulatta
ENSPTIG00000004613	LSM10	100	92.683	ENSMNEG00000020023	LSM10	100	92.683	Macaca_nemestrina
ENSPTIG00000004613	LSM10	100	92.683	ENSMLEG00000025150	LSM10	100	92.683	Mandrillus_leucophaeus
ENSPTIG00000004613	LSM10	98	65.000	ENSMAMG00000004427	oscp1a	98	65.000	Mastacembelus_armatus
ENSPTIG00000004613	LSM10	96	66.949	ENSMZEG00005026307	oscp1a	96	66.949	Maylandia_zebra
ENSPTIG00000004613	LSM10	100	74.797	ENSMGAG00000015707	LSM10	100	74.797	Meleagris_gallopavo
ENSPTIG00000004613	LSM10	98	92.562	ENSMAUG00000016624	Lsm10	99	92.562	Mesocricetus_auratus
ENSPTIG00000004613	LSM10	98	93.388	ENSMOCG00000021943	Lsm10	99	93.388	Microtus_ochrogaster
ENSPTIG00000004613	LSM10	95	64.957	ENSMMOG00000013597	oscp1a	87	64.957	Mola_mola
ENSPTIG00000004613	LSM10	100	86.179	ENSMODG00000023328	LSM10	100	86.179	Monodelphis_domestica
ENSPTIG00000004613	LSM10	58	59.211	ENSMALG00000012661	oscp1a	60	59.211	Monopterus_albus
ENSPTIG00000004613	LSM10	98	93.388	MGP_CAROLIEiJ_G0026467	Lsm10	100	93.548	Mus_caroli
ENSPTIG00000004613	LSM10	98	94.215	ENSMUSG00000050188	Lsm10	100	94.624	Mus_musculus
ENSPTIG00000004613	LSM10	98	94.215	MGP_PahariEiJ_G0028798	Lsm10	100	94.624	Mus_pahari
ENSPTIG00000004613	LSM10	98	94.215	MGP_SPRETEiJ_G0027446	Lsm10	100	94.624	Mus_spretus
ENSPTIG00000004613	LSM10	100	97.561	ENSMPUG00000018593	LSM10	100	97.561	Mustela_putorius_furo
ENSPTIG00000004613	LSM10	100	90.244	ENSMLUG00000023895	LSM10	100	90.244	Myotis_lucifugus
ENSPTIG00000004613	LSM10	100	94.309	ENSNGAG00000015011	Lsm10	100	94.309	Nannospalax_galili
ENSPTIG00000004613	LSM10	96	67.797	ENSNBRG00000014306	oscp1a	96	67.797	Neolamprologus_brichardi
ENSPTIG00000004613	LSM10	100	93.496	ENSNLEG00000033754	LSM10	100	93.496	Nomascus_leucogenys
ENSPTIG00000004613	LSM10	100	86.179	ENSMEUG00000006313	LSM10	100	86.179	Notamacropus_eugenii
ENSPTIG00000004613	LSM10	100	91.057	ENSOPRG00000001699	LSM10	100	91.057	Ochotona_princeps
ENSPTIG00000004613	LSM10	100	95.122	ENSODEG00000019161	LSM10	100	95.122	Octodon_degus
ENSPTIG00000004613	LSM10	96	67.797	ENSONIG00000020904	oscp1a	97	67.797	Oreochromis_niloticus
ENSPTIG00000004613	LSM10	100	78.862	ENSOANG00000002066	LSM10	100	78.862	Ornithorhynchus_anatinus
ENSPTIG00000004613	LSM10	100	90.244	ENSOCUG00000005333	LSM10	100	90.244	Oryctolagus_cuniculus
ENSPTIG00000004613	LSM10	97	66.387	ENSORLG00000009504	oscp1a	98	66.387	Oryzias_latipes
ENSPTIG00000004613	LSM10	97	66.387	ENSORLG00020016201	oscp1a	98	66.387	Oryzias_latipes_hni
ENSPTIG00000004613	LSM10	97	66.387	ENSORLG00015007794	oscp1a	98	66.387	Oryzias_latipes_hsok
ENSPTIG00000004613	LSM10	100	95.122	ENSOGAG00000002653	LSM10	100	95.122	Otolemur_garnettii
ENSPTIG00000004613	LSM10	98	93.333	ENSOARG00000009596	LSM10	98	93.333	Ovis_aries
ENSPTIG00000004613	LSM10	100	91.870	ENSPPAG00000023465	LSM10	100	91.870	Pan_paniscus
ENSPTIG00000004613	LSM10	100	100.000	ENSPPRG00000014619	LSM10	100	100.000	Panthera_pardus
ENSPTIG00000004613	LSM10	100	91.870	ENSPTRG00000000539	LSM10	100	91.870	Pan_troglodytes
ENSPTIG00000004613	LSM10	100	92.683	ENSPANG00000023172	LSM10	100	92.683	Papio_anubis
ENSPTIG00000004613	LSM10	98	65.833	ENSPKIG00000003728	oscp1a	97	65.833	Paramormyrops_kingsleyae
ENSPTIG00000004613	LSM10	100	73.171	ENSPSIG00000000590	LSM10	100	73.171	Pelodiscus_sinensis
ENSPTIG00000004613	LSM10	62	65.789	ENSPMGG00000015718	oscp1a	99	65.789	Periophthalmus_magnuspinnatus
ENSPTIG00000004613	LSM10	84	87.379	ENSPCIG00000014865	LSM10	76	87.379	Phascolarctos_cinereus
ENSPTIG00000004613	LSM10	91	67.857	ENSPFOG00000020490	oscp1a	95	67.857	Poecilia_formosa
ENSPTIG00000004613	LSM10	91	67.857	ENSPLAG00000016537	oscp1a	85	67.857	Poecilia_latipinna
ENSPTIG00000004613	LSM10	88	68.519	ENSPMEG00000000174	oscp1a	94	68.519	Poecilia_mexicana
ENSPTIG00000004613	LSM10	91	66.964	ENSPREG00000009899	oscp1a	85	66.964	Poecilia_reticulata
ENSPTIG00000004613	LSM10	100	92.683	ENSPPYG00000001539	LSM10	100	92.683	Pongo_abelii
ENSPTIG00000004613	LSM10	100	91.057	ENSPCAG00000002520	LSM10	100	91.057	Procavia_capensis
ENSPTIG00000004613	LSM10	100	93.496	ENSPVAG00000008644	LSM10	100	93.496	Pteropus_vampyrus
ENSPTIG00000004613	LSM10	96	66.949	ENSPNYG00000003138	oscp1a	96	66.949	Pundamilia_nyererei
ENSPTIG00000004613	LSM10	95	67.521	ENSPNAG00000028829	oscp1a	97	67.521	Pygocentrus_nattereri
ENSPTIG00000004613	LSM10	98	95.041	ENSRNOG00000025716	Lsm10	99	95.041	Rattus_norvegicus
ENSPTIG00000004613	LSM10	100	92.683	ENSRBIG00000001561	LSM10	100	92.683	Rhinopithecus_bieti
ENSPTIG00000004613	LSM10	100	92.683	ENSRROG00000011414	LSM10	100	92.683	Rhinopithecus_roxellana
ENSPTIG00000004613	LSM10	100	92.683	ENSSBOG00000036413	-	100	92.683	Saimiri_boliviensis_boliviensis
ENSPTIG00000004613	LSM10	100	85.366	ENSSHAG00000018056	LSM10	100	85.366	Sarcophilus_harrisii
ENSPTIG00000004613	LSM10	98	66.942	ENSSFOG00015019954	lsm10	99	66.942	Scleropages_formosus
ENSPTIG00000004613	LSM10	93	66.087	ENSSMAG00000001297	oscp1a	98	66.087	Scophthalmus_maximus
ENSPTIG00000004613	LSM10	98	64.463	ENSSDUG00000007090	oscp1a	98	64.463	Seriola_dumerili
ENSPTIG00000004613	LSM10	94	65.517	ENSSLDG00000000800	oscp1a	96	65.517	Seriola_lalandi_dorsalis
ENSPTIG00000004613	LSM10	100	95.200	ENSSARG00000004211	LSM10	100	95.200	Sorex_araneus
ENSPTIG00000004613	LSM10	94	66.379	ENSSPAG00000009229	oscp1a	96	66.379	Stegastes_partitus
ENSPTIG00000004613	LSM10	100	92.683	ENSSSCG00000038916	LSM10	100	92.683	Sus_scrofa
ENSPTIG00000004613	LSM10	99	72.951	ENSTGUG00000001602	-	100	72.951	Taeniopygia_guttata
ENSPTIG00000004613	LSM10	99	72.951	ENSTGUG00000001600	-	100	72.951	Taeniopygia_guttata
ENSPTIG00000004613	LSM10	97	67.227	ENSTRUG00000010531	oscp1a	96	67.227	Takifugu_rubripes
ENSPTIG00000004613	LSM10	100	93.496	ENSTBEG00000016674	LSM10	100	93.496	Tupaia_belangeri
ENSPTIG00000004613	LSM10	100	95.122	ENSUAMG00000020265	LSM10	100	95.122	Ursus_americanus
ENSPTIG00000004613	LSM10	100	95.122	ENSUMAG00000001438	LSM10	57	95.122	Ursus_maritimus
ENSPTIG00000004613	LSM10	100	97.561	ENSVVUG00000023209	LSM10	100	97.561	Vulpes_vulpes
ENSPTIG00000004613	LSM10	100	70.732	ENSXETG00000027631	lsm10	100	70.732	Xenopus_tropicalis
ENSPTIG00000004613	LSM10	96	60.800	ENSXCOG00000018776	oscp1a	79	60.800	Xiphophorus_couchianus
ENSPTIG00000004613	LSM10	88	65.741	ENSXMAG00000019963	oscp1a	86	65.741	Xiphophorus_maculatus