EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000005322 (Gene tree)
Gene ID: 102950338
Gene Symbol: YBX3
Alias: -
Full Name: Y-box-binding protein 3
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 23055 bases
Position: chrKE721674.1:2578071-2601125
Accession: 102950338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000002248	CSD	PF00313.22	1.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000005920	YBX3-201	1059	XM_007076331	ENSPTIP00000002248	352 (aa)	XP_007076393	-

Gene Model

Click here to download ENSPTIG00000005322's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000005322's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000005322	YBX3	80	50.000	ENSPTIG00000011422	YBX1	83	56.794

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000005322	YBX3	81	92.334	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSPTIG00000005322	YBX3	81	97.895	ENSAMEG00000009393	YBX3	81	97.895	Ailuropoda_melanoleuca
ENSPTIG00000005322	YBX3	80	70.175	ENSAPLG00000003147	YBX3	100	70.175	Anas_platyrhynchos
ENSPTIG00000005322	YBX3	81	92.334	ENSANAG00000024492	-	90	92.982	Aotus_nancymaae
ENSPTIG00000005322	YBX3	81	94.035	ENSBTAG00000009663	YBX3	75	91.166	Bos_taurus
ENSPTIG00000005322	YBX3	55	89.873	ENSCJAG00000033824	-	71	89.041	Callithrix_jacchus
ENSPTIG00000005322	YBX3	81	92.334	ENSCJAG00000021660	-	77	92.982	Callithrix_jacchus
ENSPTIG00000005322	YBX3	82	97.917	ENSCAFG00000013401	YBX3	87	99.267	Canis_familiaris
ENSPTIG00000005322	YBX3	81	95.439	ENSCAFG00020006412	YBX3	76	95.439	Canis_lupus_dingo
ENSPTIG00000005322	YBX3	81	94.035	ENSCHIG00000010863	YBX3	79	94.346	Capra_hircus
ENSPTIG00000005322	YBX3	93	54.103	ENSTSYG00000035821	-	72	53.401	Carlito_syrichta
ENSPTIG00000005322	YBX3	83	93.898	ENSTSYG00000004204	-	87	95.088	Carlito_syrichta
ENSPTIG00000005322	YBX3	84	88.552	ENSCAPG00000015039	YBX3	93	90.141	Cavia_aperea
ENSPTIG00000005322	YBX3	81	89.860	ENSCPOG00000011329	YBX3	84	90.141	Cavia_porcellus
ENSPTIG00000005322	YBX3	81	91.986	ENSCCAG00000016469	YBX3	77	92.632	Cebus_capucinus
ENSPTIG00000005322	YBX3	81	92.334	ENSCATG00000034411	YBX3	76	92.982	Cercocebus_atys
ENSPTIG00000005322	YBX3	83	90.476	ENSCLAG00000016030	YBX3	93	91.197	Chinchilla_lanigera
ENSPTIG00000005322	YBX3	81	91.986	ENSCSAG00000008744	YBX3	76	92.632	Chlorocebus_sabaeus
ENSPTIG00000005322	YBX3	81	80.769	ENSCPBG00000014147	YBX3	79	80.986	Chrysemys_picta_bellii
ENSPTIG00000005322	YBX3	81	91.986	ENSCANG00000036801	YBX3	90	92.632	Colobus_angolensis_palliatus
ENSPTIG00000005322	YBX3	81	93.357	ENSCGRG00001016148	Ybx3	78	93.662	Cricetulus_griseus_chok1gshd
ENSPTIG00000005322	YBX3	83	91.246	ENSCGRG00000004563	Ybx3	97	92.042	Cricetulus_griseus_crigri
ENSPTIG00000005322	YBX3	80	94.366	ENSDORG00000009103	Ybx3	80	94.366	Dipodomys_ordii
ENSPTIG00000005322	YBX3	80	84.965	ENSETEG00000002557	YBX3	99	83.099	Echinops_telfairi
ENSPTIG00000005322	YBX3	81	90.526	ENSEASG00005014726	YBX3	76	90.813	Equus_asinus_asinus
ENSPTIG00000005322	YBX3	81	94.386	ENSECAG00000013777	YBX3	77	94.386	Equus_caballus
ENSPTIG00000005322	YBX3	80	92.606	ENSEEUG00000010415	YBX3	100	92.958	Erinaceus_europaeus
ENSPTIG00000005322	YBX3	81	98.951	ENSFCAG00000027748	YBX3	77	98.951	Felis_catus
ENSPTIG00000005322	YBX3	80	66.899	ENSFALG00000003661	YBX3	100	64.111	Ficedula_albicollis
ENSPTIG00000005322	YBX3	83	86.735	ENSFDAG00000021192	YBX3	91	87.324	Fukomys_damarensis
ENSPTIG00000005322	YBX3	81	61.754	ENSGALG00000031890	YBX3	74	59.011	Gallus_gallus
ENSPTIG00000005322	YBX3	81	79.720	ENSGAGG00000017780	YBX3	79	79.930	Gopherus_agassizii
ENSPTIG00000005322	YBX3	81	92.334	ENSGGOG00000001352	YBX3	76	92.982	Gorilla_gorilla
ENSPTIG00000005322	YBX3	81	77.241	ENSHGLG00000014798	-	84	78.472	Heterocephalus_glaber_female
ENSPTIG00000005322	YBX3	75	80.075	ENSHGLG00000015495	-	77	77.947	Heterocephalus_glaber_female
ENSPTIG00000005322	YBX3	60	94.000	ENSHGLG00100003589	YBX3	86	64.789	Heterocephalus_glaber_male
ENSPTIG00000005322	YBX3	83	88.435	ENSSTOG00000002108	-	88	89.437	Ictidomys_tridecemlineatus
ENSPTIG00000005322	YBX3	81	89.860	ENSSTOG00000032577	-	80	90.141	Ictidomys_tridecemlineatus
ENSPTIG00000005322	YBX3	81	68.056	ENSJJAG00000014239	Ybx3	90	84.615	Jaculus_jaculus
ENSPTIG00000005322	YBX3	81	95.804	ENSLAFG00000017247	YBX3	83	91.815	Loxodonta_africana
ENSPTIG00000005322	YBX3	81	91.986	ENSMFAG00000039369	YBX3	77	92.632	Macaca_fascicularis
ENSPTIG00000005322	YBX3	81	91.986	ENSMMUG00000022469	YBX3	88	92.632	Macaca_mulatta
ENSPTIG00000005322	YBX3	81	91.986	ENSMNEG00000045109	YBX3	77	92.632	Macaca_nemestrina
ENSPTIG00000005322	YBX3	100	84.211	ENSMLEG00000033618	YBX3	99	85.042	Mandrillus_leucophaeus
ENSPTIG00000005322	YBX3	81	67.832	ENSMGAG00000014224	YBX3	99	67.719	Meleagris_gallopavo
ENSPTIG00000005322	YBX3	81	93.007	ENSMAUG00000012185	Ybx3	88	93.310	Mesocricetus_auratus
ENSPTIG00000005322	YBX3	76	76.238	ENSMICG00000031459	-	74	81.429	Microcebus_murinus
ENSPTIG00000005322	YBX3	81	95.804	ENSMICG00000038002	-	77	96.127	Microcebus_murinus
ENSPTIG00000005322	YBX3	81	93.357	ENSMOCG00000016291	Ybx3	93	93.662	Microtus_ochrogaster
ENSPTIG00000005322	YBX3	85	82.895	ENSMODG00000018248	YBX3	91	85.965	Monodelphis_domestica
ENSPTIG00000005322	YBX3	81	93.357	MGP_CAROLIEiJ_G0028947	Ybx3	78	93.662	Mus_caroli
ENSPTIG00000005322	YBX3	81	93.357	ENSMUSG00000030189	Ybx3	78	93.662	Mus_musculus
ENSPTIG00000005322	YBX3	81	93.357	MGP_PahariEiJ_G0022709	Ybx3	78	93.662	Mus_pahari
ENSPTIG00000005322	YBX3	81	93.706	MGP_SPRETEiJ_G0029994	Ybx3	78	94.014	Mus_spretus
ENSPTIG00000005322	YBX3	81	78.571	ENSMPUG00000011810	YBX3	77	79.310	Mustela_putorius_furo
ENSPTIG00000005322	YBX3	75	95.149	ENSMLUG00000007476	YBX3	100	95.149	Myotis_lucifugus
ENSPTIG00000005322	YBX3	80	88.380	ENSNGAG00000000710	Ybx3	62	88.380	Nannospalax_galili
ENSPTIG00000005322	YBX3	81	89.895	ENSNLEG00000034844	YBX3	81	88.772	Nomascus_leucogenys
ENSPTIG00000005322	YBX3	81	85.664	ENSODEG00000017957	YBX3	84	85.915	Octodon_degus
ENSPTIG00000005322	YBX3	81	89.510	ENSOCUG00000001889	YBX3	81	90.747	Oryctolagus_cuniculus
ENSPTIG00000005322	YBX3	81	92.833	ENSOGAG00000013245	YBX3	77	93.127	Otolemur_garnettii
ENSPTIG00000005322	YBX3	81	85.017	ENSOARG00000020919	YBX3	96	85.263	Ovis_aries
ENSPTIG00000005322	YBX3	81	92.334	ENSPPAG00000039068	YBX3	79	92.982	Pan_paniscus
ENSPTIG00000005322	YBX3	81	99.301	ENSPPRG00000005859	YBX3	77	99.301	Panthera_pardus
ENSPTIG00000005322	YBX3	81	92.334	ENSPTRG00000004681	YBX3	76	92.982	Pan_troglodytes
ENSPTIG00000005322	YBX3	81	92.334	ENSPANG00000010280	YBX3	77	92.982	Papio_anubis
ENSPTIG00000005322	YBX3	60	99.038	ENSPSIG00000009247	YBX3	90	100.000	Pelodiscus_sinensis
ENSPTIG00000005322	YBX3	57	98.864	ENSPEMG00000010391	-	81	67.845	Peromyscus_maniculatus_bairdii
ENSPTIG00000005322	YBX3	81	93.706	ENSPEMG00000012132	-	89	94.014	Peromyscus_maniculatus_bairdii
ENSPTIG00000005322	YBX3	73	82.558	ENSPCIG00000029949	YBX3	100	82.558	Phascolarctos_cinereus
ENSPTIG00000005322	YBX3	81	91.986	ENSPPYG00000004279	YBX3	77	92.632	Pongo_abelii
ENSPTIG00000005322	YBX3	59	94.686	ENSPCAG00000001397	YBX3	69	94.975	Procavia_capensis
ENSPTIG00000005322	YBX3	81	79.720	ENSPVAG00000006740	YBX3	77	79.720	Pteropus_vampyrus
ENSPTIG00000005322	YBX3	81	93.706	ENSRNOG00000005480	Ybx3	78	94.014	Rattus_norvegicus
ENSPTIG00000005322	YBX3	81	91.986	ENSRBIG00000039208	YBX3	77	92.632	Rhinopithecus_bieti
ENSPTIG00000005322	YBX3	81	91.986	ENSRROG00000029638	YBX3	77	92.632	Rhinopithecus_roxellana
ENSPTIG00000005322	YBX3	83	94.558	ENSSBOG00000030573	YBX3	84	92.982	Saimiri_boliviensis_boliviensis
ENSPTIG00000005322	YBX3	80	82.131	ENSSHAG00000003262	YBX3	98	83.162	Sarcophilus_harrisii
ENSPTIG00000005322	YBX3	52	72.667	ENSSPUG00000009911	-	60	75.000	Sphenodon_punctatus
ENSPTIG00000005322	YBX3	81	97.552	ENSSSCG00000000633	YBX3	75	97.552	Sus_scrofa
ENSPTIG00000005322	YBX3	80	68.421	ENSTGUG00000012047	YBX3	100	67.719	Taeniopygia_guttata
ENSPTIG00000005322	YBX3	81	95.819	ENSTBEG00000012570	YBX3	79	95.819	Tupaia_belangeri
ENSPTIG00000005322	YBX3	74	85.714	ENSTTRG00000008045	YBX3	100	86.466	Tursiops_truncatus
ENSPTIG00000005322	YBX3	78	94.565	ENSUAMG00000016662	YBX3	100	94.565	Ursus_americanus
ENSPTIG00000005322	YBX3	83	97.952	ENSUMAG00000016118	YBX3	97	97.952	Ursus_maritimus
ENSPTIG00000005322	YBX3	80	69.611	ENSVPAG00000000876	YBX3	100	72.792	Vicugna_pacos
ENSPTIG00000005322	YBX3	78	95.290	ENSVVUG00000004956	YBX3	100	95.290	Vulpes_vulpes
ENSPTIG00000005322	YBX3	55	92.045	ENSXETG00000016239	ybx3	89	54.515	Xenopus_tropicalis