EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000005413 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 4886 bases
Position: chrKE721800.1:14209842-14214727
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000002377	RRM_1	PF00076.22	2.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000006053	-	396	-	ENSPTIP00000002377	131 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000005413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000005413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000005413	-	63	45.161	ENSPTIG00000013610	ELAVL3	66	44.615
ENSPTIG00000005413	-	72	44.444	ENSPTIG00000013602	ELAVL1	74	44.444
ENSPTIG00000005413	-	63	40.741	ENSPTIG00000005627	ELAVL2	66	40.741
ENSPTIG00000005413	-	60	34.615	ENSPTIG00000018134	-	67	34.615
ENSPTIG00000005413	-	76	40.741	ENSPTIG00000016727	ELAVL4	62	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000005413	-	70	89.130	ENSAMXG00000034719	-	77	89.474	Astyanax_mexicanus
ENSPTIG00000005413	-	69	86.667	ENSBTAG00000051439	-	57	86.667	Bos_taurus
ENSPTIG00000005413	-	92	97.521	ENSCHIG00000009150	-	99	97.521	Capra_hircus
ENSPTIG00000005413	-	89	99.145	ENSECAG00000036983	-	89	99.145	Equus_caballus
ENSPTIG00000005413	-	69	92.222	ENSGALG00000048972	-	83	92.222	Gallus_gallus
ENSPTIG00000005413	-	61	62.500	ENSNBRG00000010123	-	75	62.500	Neolamprologus_brichardi
ENSPTIG00000005413	-	53	86.957	ENSOANG00000031583	-	100	86.957	Ornithorhynchus_anatinus
ENSPTIG00000005413	-	70	89.130	ENSPKIG00000024667	-	77	89.474	Paramormyrops_kingsleyae
ENSPTIG00000005413	-	91	81.513	ENSPLAG00000000224	-	89	84.259	Poecilia_latipinna
ENSPTIG00000005413	-	70	89.130	ENSPLAG00000013524	-	77	89.474	Poecilia_latipinna
ENSPTIG00000005413	-	91	81.513	ENSPLAG00000015969	-	89	84.259	Poecilia_latipinna
ENSPTIG00000005413	-	70	89.130	ENSPMEG00000011603	-	77	89.474	Poecilia_mexicana
ENSPTIG00000005413	-	92	99.174	ENSUAMG00000025729	-	99	99.174	Ursus_americanus
ENSPTIG00000005413	-	92	99.174	ENSUMAG00000008820	-	99	99.174	Ursus_maritimus
ENSPTIG00000005413	-	89	100.000	ENSVVUG00000018262	-	90	100.000	Vulpes_vulpes
ENSPTIG00000005413	-	68	86.517	ENSVVUG00000003252	-	77	86.517	Vulpes_vulpes