EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000005511 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 25888 bases
Position: chrKE721800.1:14212267-14238154
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000002529	RRM_1	PF00076.22	7e-23	1	2
ENSPTIP00000002529	RRM_1	PF00076.22	7e-23	2	2
ENSPTIP00000002533	RRM_1	PF00076.22	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000006211	-	504	-	ENSPTIP00000002529	167 (aa)	-	-
ENSPTIT00000006215	-	450	-	ENSPTIP00000002533	149 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000005511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000005511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000005511	-	90	30.973	ENSPTIG00000014387	-	51	31.959
ENSPTIG00000005511	-	87	30.769	ENSPTIG00000016727	ELAVL4	56	30.769
ENSPTIG00000005511	-	80	31.579	ENSPTIG00000015170	HNRNPA1	63	31.579
ENSPTIG00000005511	-	51	38.824	ENSPTIG00000017702	RBM3	51	38.824
ENSPTIG00000005511	-	72	30.769	ENSPTIG00000005627	ELAVL2	51	30.769
ENSPTIG00000005511	-	80	32.143	ENSPTIG00000016796	-	66	33.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000005511	-	90	79.870	ENSG00000161082	CELF5	51	79.870	Homo_sapiens
ENSPTIG00000005511	-	98	100.000	ENSG00000140488	CELF6	98	92.366	Homo_sapiens
ENSPTIG00000005511	-	94	82.278	ENSAPOG00000019202	si:dkey-205h23.2	53	82.278	Acanthochromis_polyacanthus
ENSPTIG00000005511	-	94	82.278	ENSACIG00000003650	si:dkey-205h23.2	55	82.278	Amphilophus_citrinellus
ENSPTIG00000005511	-	94	82.278	ENSAOCG00000000908	si:dkey-205h23.2	53	82.278	Amphiprion_ocellaris
ENSPTIG00000005511	-	94	82.278	ENSAPEG00000009237	si:dkey-205h23.2	53	82.278	Amphiprion_percula
ENSPTIG00000005511	-	94	82.278	ENSACLG00000016215	si:dkey-205h23.2	53	82.278	Astatotilapia_calliptera
ENSPTIG00000005511	-	81	85.294	ENSBTAG00000021774	CELF5	80	85.294	Bos_taurus
ENSPTIG00000005511	-	90	79.870	ENSCAFG00020018264	CELF5	62	80.328	Canis_lupus_dingo
ENSPTIG00000005511	-	98	98.780	ENSCAFG00020006479	-	93	95.973	Canis_lupus_dingo
ENSPTIG00000005511	-	77	80.328	ENSCCAG00000028950	-	69	80.328	Cebus_capucinus
ENSPTIG00000005511	-	58	80.220	ENSCSAG00000017935	-	72	74.038	Chlorocebus_sabaeus
ENSPTIG00000005511	-	81	71.311	ENSCPBG00000015256	-	70	76.106	Chrysemys_picta_bellii
ENSPTIG00000005511	-	84	81.690	ENSCPBG00000010903	CELF5	76	78.333	Chrysemys_picta_bellii
ENSPTIG00000005511	-	94	82.278	ENSCSEG00000007749	si:dkey-205h23.2	52	82.278	Cynoglossus_semilaevis
ENSPTIG00000005511	-	77	81.818	ENSDARG00000090727	celf5b	58	81.395	Danio_rerio
ENSPTIG00000005511	-	77	83.146	ENSDNOG00000043624	CELF5	55	83.146	Dasypus_novemcinctus
ENSPTIG00000005511	-	87	97.945	ENSDORG00000004882	Celf6	50	97.945	Dipodomys_ordii
ENSPTIG00000005511	-	64	78.571	ENSEBUG00000011155	-	59	78.571	Eptatretus_burgeri
ENSPTIG00000005511	-	69	75.000	ENSEBUG00000013374	-	88	75.000	Eptatretus_burgeri
ENSPTIG00000005511	-	77	80.328	ENSEASG00005022118	-	72	80.328	Equus_asinus_asinus
ENSPTIG00000005511	-	100	99.401	ENSECAG00000035617	-	94	99.401	Equus_caballus
ENSPTIG00000005511	-	58	81.319	ENSFALG00000009186	-	74	80.435	Ficedula_albicollis
ENSPTIG00000005511	-	94	82.278	ENSFHEG00000023111	-	55	82.278	Fundulus_heteroclitus
ENSPTIG00000005511	-	76	69.231	ENSGALG00000038930	-	66	69.231	Gallus_gallus
ENSPTIG00000005511	-	94	82.278	ENSGAFG00000010304	si:dkey-205h23.2	53	82.278	Gambusia_affinis
ENSPTIG00000005511	-	93	63.309	ENSGAGG00000016824	-	61	68.478	Gopherus_agassizii
ENSPTIG00000005511	-	94	82.278	ENSHBUG00000001878	si:dkey-205h23.2	53	82.278	Haplochromis_burtoni
ENSPTIG00000005511	-	94	83.019	ENSHCOG00000021105	si:dkey-205h23.2	55	83.019	Hippocampus_comes
ENSPTIG00000005511	-	94	84.177	ENSIPUG00000010527	si:dkey-205h23.2	53	84.177	Ictalurus_punctatus
ENSPTIG00000005511	-	94	82.278	ENSLBEG00000011338	si:dkey-205h23.2	55	82.278	Labrus_bergylta
ENSPTIG00000005511	-	58	61.111	ENSLACG00000016312	-	80	57.143	Latimeria_chalumnae
ENSPTIG00000005511	-	94	82.278	ENSMAMG00000003343	-	55	82.278	Mastacembelus_armatus
ENSPTIG00000005511	-	94	82.278	ENSMZEG00005007126	si:dkey-205h23.2	53	82.278	Maylandia_zebra
ENSPTIG00000005511	-	81	84.672	ENSMICG00000003506	CELF5	70	80.328	Microcebus_murinus
ENSPTIG00000005511	-	94	62.366	ENSMMOG00000016498	si:dkey-205h23.2	56	62.366	Mola_mola
ENSPTIG00000005511	-	99	97.590	MGP_CAROLIEiJ_G0032305	Celf6	91	97.590	Mus_caroli
ENSPTIG00000005511	-	81	84.672	MGP_CAROLIEiJ_G0015643	-	93	80.328	Mus_caroli
ENSPTIG00000005511	-	99	97.590	ENSMUSG00000032297	Celf6	91	97.590	Mus_musculus
ENSPTIG00000005511	-	81	84.672	MGP_PahariEiJ_G0031056	-	93	80.328	Mus_pahari
ENSPTIG00000005511	-	99	97.590	MGP_PahariEiJ_G0015171	Celf6	91	97.590	Mus_pahari
ENSPTIG00000005511	-	99	97.590	MGP_SPRETEiJ_G0033445	Celf6	91	97.590	Mus_spretus
ENSPTIG00000005511	-	77	80.328	ENSNGAG00000019694	-	74	80.328	Nannospalax_galili
ENSPTIG00000005511	-	94	82.278	ENSNBRG00000010105	si:dkey-205h23.2	55	82.278	Neolamprologus_brichardi
ENSPTIG00000005511	-	81	82.353	ENSONIG00000004856	celf5a	69	72.826	Oreochromis_niloticus
ENSPTIG00000005511	-	77	80.328	ENSOANG00000009501	-	84	80.328	Ornithorhynchus_anatinus
ENSPTIG00000005511	-	94	82.278	ENSORLG00000013392	si:dkey-205h23.2	55	82.278	Oryzias_latipes
ENSPTIG00000005511	-	94	82.278	ENSORLG00020021262	si:dkey-205h23.2	55	82.278	Oryzias_latipes_hni
ENSPTIG00000005511	-	94	82.278	ENSORLG00015019715	si:dkey-205h23.2	55	82.278	Oryzias_latipes_hsok
ENSPTIG00000005511	-	94	82.278	ENSOMEG00000015364	si:dkey-205h23.2	55	82.278	Oryzias_melastigma
ENSPTIG00000005511	-	74	66.102	ENSPKIG00000024672	-	65	66.102	Paramormyrops_kingsleyae
ENSPTIG00000005511	-	94	81.013	ENSPKIG00000019554	-	53	81.013	Paramormyrops_kingsleyae
ENSPTIG00000005511	-	94	82.911	ENSPKIG00000004198	si:dkey-205h23.2	50	75.287	Paramormyrops_kingsleyae
ENSPTIG00000005511	-	55	84.783	ENSPSIG00000007119	-	85	84.783	Pelodiscus_sinensis
ENSPTIG00000005511	-	58	74.725	ENSPSIG00000015573	-	74	73.118	Pelodiscus_sinensis
ENSPTIG00000005511	-	98	75.263	ENSPCIG00000016305	-	50	75.263	Phascolarctos_cinereus
ENSPTIG00000005511	-	77	78.689	ENSPLAG00000013501	celf5a	76	78.689	Poecilia_latipinna
ENSPTIG00000005511	-	77	78.689	ENSPMEG00000011632	-	79	78.689	Poecilia_mexicana
ENSPTIG00000005511	-	94	82.278	ENSPNYG00000011474	si:dkey-205h23.2	53	82.278	Pundamilia_nyererei
ENSPTIG00000005511	-	94	82.278	ENSPNAG00000029884	si:dkey-205h23.2	55	82.278	Pygocentrus_nattereri
ENSPTIG00000005511	-	58	80.220	ENSRNOG00000049802	AABR07031533.1	56	80.220	Rattus_norvegicus
ENSPTIG00000005511	-	77	80.328	ENSSBOG00000036241	-	76	80.328	Saimiri_boliviensis_boliviensis
ENSPTIG00000005511	-	57	89.412	ENSSHAG00000008992	-	98	83.871	Sarcophilus_harrisii
ENSPTIG00000005511	-	94	82.911	ENSSMAG00000008575	-	54	82.911	Scophthalmus_maximus
ENSPTIG00000005511	-	94	82.278	ENSSDUG00000005607	si:dkey-205h23.2	53	82.278	Seriola_dumerili
ENSPTIG00000005511	-	75	72.650	ENSSPAG00000007933	-	89	72.650	Stegastes_partitus
ENSPTIG00000005511	-	58	81.319	ENSTGUG00000001647	-	75	80.435	Taeniopygia_guttata
ENSPTIG00000005511	-	94	82.278	ENSTRUG00000012391	si:dkey-205h23.2	53	82.278	Takifugu_rubripes
ENSPTIG00000005511	-	50	65.823	ENSUAMG00000025536	-	61	65.823	Ursus_americanus
ENSPTIG00000005511	-	100	100.000	ENSUAMG00000025727	-	94	100.000	Ursus_americanus
ENSPTIG00000005511	-	50	65.823	ENSUMAG00000002210	-	61	65.823	Ursus_maritimus
ENSPTIG00000005511	-	100	98.802	ENSVVUG00000018268	-	94	98.802	Vulpes_vulpes
ENSPTIG00000005511	-	77	80.328	ENSVVUG00000003242	-	62	80.328	Vulpes_vulpes
ENSPTIG00000005511	-	94	82.278	ENSXMAG00000018769	si:dkey-205h23.2	55	82.278	Xiphophorus_maculatus