EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000005711 (Gene tree)
Gene ID: 102958462
Gene Symbol: -
Alias: -
Full Name: pre-mRNA-splicing factor SYF2-like
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 5614 bases
Position: chrKE721781.1:601647-607260
Accession: 102958462
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000002783	SYF2	PF08231.12	1.2e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000006476	-	998	XM_007083664	ENSPTIP00000002783	274 (aa)	XP_007083726	UPI00042C2A7F

Gene Model

Click here to download ENSPTIG00000005711's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000005711's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000005711	-	83	95.197	ENSPTIG00000007036	-	93	95.197

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000005711	-	82	96.460	ENSG00000117614	SYF2	93	96.460	Homo_sapiens
ENSPTIG00000005711	-	80	85.321	ENSAPOG00000001174	syf2	91	85.648	Acanthochromis_polyacanthus
ENSPTIG00000005711	-	71	97.436	ENSAMEG00000010134	-	100	97.436	Ailuropoda_melanoleuca
ENSPTIG00000005711	-	83	94.760	ENSAMEG00000010115	-	89	97.685	Ailuropoda_melanoleuca
ENSPTIG00000005711	-	81	79.221	ENSACIG00000023688	syf2	86	82.791	Amphilophus_citrinellus
ENSPTIG00000005711	-	80	85.780	ENSAOCG00000022046	syf2	92	86.111	Amphiprion_ocellaris
ENSPTIG00000005711	-	73	84.577	ENSAOCG00000010912	syf2	62	84.925	Amphiprion_ocellaris
ENSPTIG00000005711	-	80	85.780	ENSAPEG00000018858	syf2	83	86.111	Amphiprion_percula
ENSPTIG00000005711	-	79	83.410	ENSATEG00000007745	syf2	91	83.796	Anabas_testudineus
ENSPTIG00000005711	-	73	89.500	ENSAPLG00000016435	SYF2	99	89.500	Anas_platyrhynchos
ENSPTIG00000005711	-	74	86.275	ENSACAG00000013653	-	100	86.275	Anolis_carolinensis
ENSPTIG00000005711	-	61	76.647	ENSACAG00000026777	-	94	77.070	Anolis_carolinensis
ENSPTIG00000005711	-	82	97.345	ENSANAG00000032473	SYF2	93	97.345	Aotus_nancymaae
ENSPTIG00000005711	-	80	82.110	ENSACLG00000019916	syf2	91	82.870	Astatotilapia_calliptera
ENSPTIG00000005711	-	80	83.486	ENSAMXG00000004051	syf2	91	83.796	Astyanax_mexicanus
ENSPTIG00000005711	-	80	98.165	ENSBTAG00000001651	SYF2	92	98.165	Bos_taurus
ENSPTIG00000005711	-	76	51.185	WBGene00019402	syf-2	90	51.185	Caenorhabditis_elegans
ENSPTIG00000005711	-	83	96.930	ENSCJAG00000046570	SYF2	94	96.930	Callithrix_jacchus
ENSPTIG00000005711	-	81	89.640	ENSCAFG00000030331	-	92	91.667	Canis_familiaris
ENSPTIG00000005711	-	83	96.070	ENSCAFG00000012895	-	93	96.070	Canis_familiaris
ENSPTIG00000005711	-	83	96.070	ENSCAFG00020021091	-	93	96.070	Canis_lupus_dingo
ENSPTIG00000005711	-	66	89.560	ENSCAFG00020021094	-	83	98.077	Canis_lupus_dingo
ENSPTIG00000005711	-	80	98.624	ENSCHIG00000020874	SYF2	90	98.624	Capra_hircus
ENSPTIG00000005711	-	80	97.248	ENSTSYG00000005114	SYF2	90	97.248	Carlito_syrichta
ENSPTIG00000005711	-	72	98.485	ENSCAPG00000010006	SYF2	100	98.485	Cavia_aperea
ENSPTIG00000005711	-	82	96.018	ENSCPOG00000005326	SYF2	89	98.611	Cavia_porcellus
ENSPTIG00000005711	-	82	97.345	ENSCCAG00000022459	SYF2	93	97.345	Cebus_capucinus
ENSPTIG00000005711	-	82	95.575	ENSCATG00000026917	SYF2	89	98.148	Cercocebus_atys
ENSPTIG00000005711	-	82	96.903	ENSCLAG00000008474	SYF2	93	96.903	Chinchilla_lanigera
ENSPTIG00000005711	-	83	95.197	ENSCSAG00000000948	SYF2	94	95.197	Chlorocebus_sabaeus
ENSPTIG00000005711	-	59	80.982	ENSCHOG00000005273	-	88	79.375	Choloepus_hoffmanni
ENSPTIG00000005711	-	81	89.238	ENSCPBG00000025073	SYF2	87	90.278	Chrysemys_picta_bellii
ENSPTIG00000005711	-	77	53.991	ENSCING00000003017	-	89	53.521	Ciona_intestinalis
ENSPTIG00000005711	-	77	51.643	ENSCSAVG00000006627	-	97	51.643	Ciona_savignyi
ENSPTIG00000005711	-	82	81.858	ENSCANG00000037322	SYF2	87	83.333	Colobus_angolensis_palliatus
ENSPTIG00000005711	-	86	90.717	ENSCGRG00001020733	Syf2	98	90.717	Cricetulus_griseus_chok1gshd
ENSPTIG00000005711	-	72	95.918	ENSCGRG00000005095	Syf2	96	95.477	Cricetulus_griseus_crigri
ENSPTIG00000005711	-	80	78.995	ENSCSEG00000000117	syf2	90	79.535	Cynoglossus_semilaevis
ENSPTIG00000005711	-	80	82.569	ENSCVAG00000019543	syf2	90	82.870	Cyprinodon_variegatus
ENSPTIG00000005711	-	80	83.636	ENSDARG00000004706	syf2	91	83.796	Danio_rerio
ENSPTIG00000005711	-	81	96.413	ENSDNOG00000047605	SYF2	91	96.413	Dasypus_novemcinctus
ENSPTIG00000005711	-	83	95.595	ENSDORG00000001274	Syf2	93	95.595	Dipodomys_ordii
ENSPTIG00000005711	-	80	57.466	FBgn0033556	CG12343	96	57.339	Drosophila_melanogaster
ENSPTIG00000005711	-	80	77.376	ENSETEG00000015729	SYF2	88	81.188	Echinops_telfairi
ENSPTIG00000005711	-	72	60.914	ENSEBUG00000015402	syf2	95	60.914	Eptatretus_burgeri
ENSPTIG00000005711	-	81	85.202	ENSEASG00005004232	-	89	86.111	Equus_asinus_asinus
ENSPTIG00000005711	-	81	97.758	ENSEASG00005004224	-	91	97.758	Equus_asinus_asinus
ENSPTIG00000005711	-	81	97.758	ENSECAG00000010440	-	93	97.758	Equus_caballus
ENSPTIG00000005711	-	81	97.758	ENSECAG00000012023	-	91	97.758	Equus_caballus
ENSPTIG00000005711	-	57	87.261	ENSEEUG00000015084	SYF2	85	87.097	Erinaceus_europaeus
ENSPTIG00000005711	-	80	85.455	ENSELUG00000003465	syf2	91	86.574	Esox_lucius
ENSPTIG00000005711	-	83	94.760	ENSFCAG00000043095	-	88	97.685	Felis_catus
ENSPTIG00000005711	-	99	84.672	ENSFCAG00000010324	-	75	100.000	Felis_catus
ENSPTIG00000005711	-	74	86.275	ENSFALG00000000460	SYF2	88	85.648	Ficedula_albicollis
ENSPTIG00000005711	-	88	91.322	ENSFDAG00000008310	SYF2	89	98.148	Fukomys_damarensis
ENSPTIG00000005711	-	80	68.037	ENSFHEG00000007238	syf2	96	68.203	Fundulus_heteroclitus
ENSPTIG00000005711	-	78	84.651	ENSGMOG00000019138	syf2	96	84.651	Gadus_morhua
ENSPTIG00000005711	-	81	89.238	ENSGALG00000013639	SYF2	86	90.278	Gallus_gallus
ENSPTIG00000005711	-	80	80.734	ENSGAFG00000019435	syf2	91	81.481	Gambusia_affinis
ENSPTIG00000005711	-	80	82.273	ENSGACG00000007305	syf2	90	83.721	Gasterosteus_aculeatus
ENSPTIG00000005711	-	81	89.686	ENSGAGG00000010670	SYF2	87	90.741	Gopherus_agassizii
ENSPTIG00000005711	-	82	96.903	ENSGGOG00000012796	SYF2	93	96.903	Gorilla_gorilla
ENSPTIG00000005711	-	80	82.110	ENSHBUG00000020477	syf2	93	82.870	Haplochromis_burtoni
ENSPTIG00000005711	-	82	83.186	ENSHGLG00000004304	-	90	83.333	Heterocephalus_glaber_female
ENSPTIG00000005711	-	80	98.624	ENSHGLG00000014393	SYF2	89	98.624	Heterocephalus_glaber_female
ENSPTIG00000005711	-	80	98.624	ENSHGLG00100014722	SYF2	93	95.133	Heterocephalus_glaber_male
ENSPTIG00000005711	-	80	83.486	ENSHCOG00000012904	syf2	70	84.186	Hippocampus_comes
ENSPTIG00000005711	-	80	84.404	ENSIPUG00000019859	syf2	91	85.185	Ictalurus_punctatus
ENSPTIG00000005711	-	53	97.260	ENSSTOG00000023984	SYF2	100	97.260	Ictidomys_tridecemlineatus
ENSPTIG00000005711	-	73	97.487	ENSJJAG00000013301	Syf2	94	97.487	Jaculus_jaculus
ENSPTIG00000005711	-	83	80.519	ENSKMAG00000013856	syf2	91	83.333	Kryptolebias_marmoratus
ENSPTIG00000005711	-	79	83.871	ENSLBEG00000014425	syf2	91	84.259	Labrus_bergylta
ENSPTIG00000005711	-	80	85.909	ENSLACG00000012064	SYF2	91	87.037	Latimeria_chalumnae
ENSPTIG00000005711	-	81	83.408	ENSLOCG00000002728	syf2	86	85.185	Lepisosteus_oculatus
ENSPTIG00000005711	-	80	97.706	ENSLAFG00000023150	-	89	97.706	Loxodonta_africana
ENSPTIG00000005711	-	67	65.217	ENSLAFG00000030814	-	100	65.217	Loxodonta_africana
ENSPTIG00000005711	-	82	96.018	ENSMFAG00000041831	SYF2	93	96.018	Macaca_fascicularis
ENSPTIG00000005711	-	82	96.018	ENSMMUG00000002968	SYF2	93	96.018	Macaca_mulatta
ENSPTIG00000005711	-	82	96.018	ENSMNEG00000030180	SYF2	93	96.018	Macaca_nemestrina
ENSPTIG00000005711	-	82	95.575	ENSMLEG00000030248	SYF2	89	98.148	Mandrillus_leucophaeus
ENSPTIG00000005711	-	79	82.028	ENSMAMG00000010403	syf2	90	82.407	Mastacembelus_armatus
ENSPTIG00000005711	-	83	78.879	ENSMZEG00005006429	syf2	91	82.870	Maylandia_zebra
ENSPTIG00000005711	-	73	89.950	ENSMGAG00000002019	SYF2	100	89.950	Meleagris_gallopavo
ENSPTIG00000005711	-	81	94.619	ENSMAUG00000018974	Syf2	89	95.833	Mesocricetus_auratus
ENSPTIG00000005711	-	73	97.990	ENSMICG00000016191	SYF2	100	97.990	Microcebus_murinus
ENSPTIG00000005711	-	81	95.516	ENSMOCG00000022938	Syf2	89	96.759	Microtus_ochrogaster
ENSPTIG00000005711	-	80	80.275	ENSMMOG00000002396	syf2	90	80.556	Mola_mola
ENSPTIG00000005711	-	81	89.333	ENSMODG00000013951	-	95	90.367	Monodelphis_domestica
ENSPTIG00000005711	-	80	82.648	ENSMALG00000010706	syf2	90	83.410	Monopterus_albus
ENSPTIG00000005711	-	81	95.067	MGP_CAROLIEiJ_G0026633	Syf2	89	96.296	Mus_caroli
ENSPTIG00000005711	-	81	95.067	ENSMUSG00000028821	Syf2	89	96.296	Mus_musculus
ENSPTIG00000005711	-	81	95.067	MGP_PahariEiJ_G0028966	Syf2	89	96.296	Mus_pahari
ENSPTIG00000005711	-	81	95.067	MGP_SPRETEiJ_G0027613	Syf2	89	96.296	Mus_spretus
ENSPTIG00000005711	-	81	96.413	ENSMPUG00000015802	-	91	96.413	Mustela_putorius_furo
ENSPTIG00000005711	-	88	91.429	ENSMPUG00000015801	-	88	99.074	Mustela_putorius_furo
ENSPTIG00000005711	-	81	95.964	ENSMLUG00000001885	SYF2	89	97.685	Myotis_lucifugus
ENSPTIG00000005711	-	81	97.309	ENSNGAG00000007912	Syf2	91	97.309	Nannospalax_galili
ENSPTIG00000005711	-	83	72.845	ENSNBRG00000010720	syf2	91	74.178	Neolamprologus_brichardi
ENSPTIG00000005711	-	82	96.903	ENSNLEG00000035185	SYF2	93	96.903	Nomascus_leucogenys
ENSPTIG00000005711	-	80	95.872	ENSOPRG00000012870	SYF2	89	95.833	Ochotona_princeps
ENSPTIG00000005711	-	82	95.133	ENSODEG00000017664	-	91	97.685	Octodon_degus
ENSPTIG00000005711	-	82	84.513	ENSODEG00000014338	-	90	86.574	Octodon_degus
ENSPTIG00000005711	-	80	82.110	ENSONIG00000008213	syf2	91	82.407	Oreochromis_niloticus
ENSPTIG00000005711	-	74	91.584	ENSOANG00000009552	SYF2	100	91.584	Ornithorhynchus_anatinus
ENSPTIG00000005711	-	81	97.309	ENSOCUG00000013050	SYF2	91	97.309	Oryctolagus_cuniculus
ENSPTIG00000005711	-	80	83.486	ENSORLG00000028820	syf2	93	84.259	Oryzias_latipes
ENSPTIG00000005711	-	88	77.686	ENSORLG00020018333	syf2	99	77.686	Oryzias_latipes_hni
ENSPTIG00000005711	-	88	77.686	ENSORLG00015014665	syf2	99	77.686	Oryzias_latipes_hsok
ENSPTIG00000005711	-	80	84.404	ENSOMEG00000013911	syf2	91	84.722	Oryzias_melastigma
ENSPTIG00000005711	-	82	96.018	ENSOGAG00000009962	SYF2	93	96.018	Otolemur_garnettii
ENSPTIG00000005711	-	80	97.727	ENSOARG00000006348	-	89	97.727	Ovis_aries
ENSPTIG00000005711	-	71	67.692	ENSOARG00000006269	-	100	67.692	Ovis_aries
ENSPTIG00000005711	-	82	96.903	ENSPPAG00000036579	SYF2	93	96.903	Pan_paniscus
ENSPTIG00000005711	-	83	94.760	ENSPPRG00000001651	-	88	97.685	Panthera_pardus
ENSPTIG00000005711	-	81	98.655	ENSPPRG00000001638	-	91	98.655	Panthera_pardus
ENSPTIG00000005711	-	82	96.903	ENSPTRG00000000352	SYF2	93	96.903	Pan_troglodytes
ENSPTIG00000005711	-	82	96.018	ENSPANG00000008139	SYF2	93	96.018	Papio_anubis
ENSPTIG00000005711	-	80	84.091	ENSPKIG00000008130	syf2	92	85.185	Paramormyrops_kingsleyae
ENSPTIG00000005711	-	88	82.927	ENSPSIG00000011816	SYF2	84	89.815	Pelodiscus_sinensis
ENSPTIG00000005711	-	83	79.386	ENSPMGG00000008755	syf2	84	82.870	Periophthalmus_magnuspinnatus
ENSPTIG00000005711	-	81	95.067	ENSPEMG00000008283	Syf2	89	96.296	Peromyscus_maniculatus_bairdii
ENSPTIG00000005711	-	81	95.516	ENSPCIG00000014235	SYF2	86	96.296	Phascolarctos_cinereus
ENSPTIG00000005711	-	80	81.193	ENSPFOG00000004116	syf2	89	81.481	Poecilia_formosa
ENSPTIG00000005711	-	80	81.193	ENSPLAG00000006691	syf2	92	81.860	Poecilia_latipinna
ENSPTIG00000005711	-	80	78.440	ENSPMEG00000011684	syf2	92	78.704	Poecilia_mexicana
ENSPTIG00000005711	-	79	81.944	ENSPREG00000003009	syf2	91	81.944	Poecilia_reticulata
ENSPTIG00000005711	-	82	96.903	ENSPPYG00000001713	SYF2	93	96.903	Pongo_abelii
ENSPTIG00000005711	-	81	63.677	ENSPCOG00000027011	SYF2	84	63.889	Propithecus_coquereli
ENSPTIG00000005711	-	82	83.628	ENSPVAG00000005841	SYF2	88	86.111	Pteropus_vampyrus
ENSPTIG00000005711	-	80	82.110	ENSPNYG00000004979	syf2	91	82.870	Pundamilia_nyererei
ENSPTIG00000005711	-	81	84.234	ENSPNAG00000015570	syf2	91	85.648	Pygocentrus_nattereri
ENSPTIG00000005711	-	81	95.067	ENSRNOG00000060597	Syf2	89	96.296	Rattus_norvegicus
ENSPTIG00000005711	-	82	93.363	ENSRBIG00000042970	SYF2	89	95.370	Rhinopithecus_bieti
ENSPTIG00000005711	-	82	96.018	ENSRROG00000001347	SYF2	93	96.018	Rhinopithecus_roxellana
ENSPTIG00000005711	-	82	96.903	ENSSBOG00000020184	SYF2	93	96.903	Saimiri_boliviensis_boliviensis
ENSPTIG00000005711	-	75	94.660	ENSSHAG00000007152	-	100	94.660	Sarcophilus_harrisii
ENSPTIG00000005711	-	81	93.274	ENSSHAG00000015630	-	87	93.981	Sarcophilus_harrisii
ENSPTIG00000005711	-	80	84.545	ENSSFOG00015023647	syf2	91	85.185	Scleropages_formosus
ENSPTIG00000005711	-	83	78.205	ENSSMAG00000009867	syf2	91	82.870	Scophthalmus_maximus
ENSPTIG00000005711	-	80	84.018	ENSSDUG00000013072	syf2	91	84.259	Seriola_dumerili
ENSPTIG00000005711	-	80	84.018	ENSSLDG00000012677	syf2	91	84.259	Seriola_lalandi_dorsalis
ENSPTIG00000005711	-	80	77.064	ENSSARG00000012889	SYF2	89	76.852	Sorex_araneus
ENSPTIG00000005711	-	81	87.892	ENSSPUG00000005251	SYF2	85	89.352	Sphenodon_punctatus
ENSPTIG00000005711	-	80	83.945	ENSSPAG00000009626	syf2	91	84.259	Stegastes_partitus
ENSPTIG00000005711	-	80	98.624	ENSSSCG00000037481	SYF2	89	98.624	Sus_scrofa
ENSPTIG00000005711	-	54	60.927	ENSTGUG00000001126	SYF2	80	62.112	Taeniopygia_guttata
ENSPTIG00000005711	-	80	81.651	ENSTRUG00000001499	syf2	86	82.326	Takifugu_rubripes
ENSPTIG00000005711	-	81	79.372	ENSTNIG00000016912	syf2	97	81.019	Tetraodon_nigroviridis
ENSPTIG00000005711	-	81	70.852	ENSTBEG00000017370	SYF2	86	70.833	Tupaia_belangeri
ENSPTIG00000005711	-	81	97.309	ENSTTRG00000003550	SYF2	91	97.309	Tursiops_truncatus
ENSPTIG00000005711	-	83	94.323	ENSUAMG00000002897	SYF2	88	97.222	Ursus_americanus
ENSPTIG00000005711	-	79	97.222	ENSUMAG00000013108	SYF2	88	97.222	Ursus_maritimus
ENSPTIG00000005711	-	80	97.248	ENSVPAG00000005705	SYF2	89	97.248	Vicugna_pacos
ENSPTIG00000005711	-	75	98.049	ENSVVUG00000027181	-	87	97.222	Vulpes_vulpes
ENSPTIG00000005711	-	83	96.070	ENSVVUG00000027175	-	93	96.070	Vulpes_vulpes
ENSPTIG00000005711	-	80	87.156	ENSXETG00000022797	syf2	87	87.037	Xenopus_tropicalis
ENSPTIG00000005711	-	78	81.860	ENSXMAG00000022698	syf2	91	81.481	Xiphophorus_maculatus