EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000006346 (Gene tree)
Gene ID: 102952253
Gene Symbol: TNRC6A
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 96063 bases
Position: chrKE721790.1:3076571-3172633
Accession: 102952253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000003770	Ago_hook	PF10427.9	6.8e-19	1	1
ENSPTIP00000003763	Ago_hook	PF10427.9	8.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000007472	TNRC6A-201	5889	XM_015538321	ENSPTIP00000003763	1962 (aa)	XP_015393807	-
ENSPTIT00000007479	TNRC6A-202	5742	-	ENSPTIP00000003770	1913 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000006346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000006346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000006346	TNRC6A	98	34.655	ENSPTIG00000022064	TNRC6B	95	36.724
ENSPTIG00000006346	TNRC6A	85	39.598	ENSPTIG00000008791	TNRC6C	91	37.337

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000006346	TNRC6A	99	94.595	ENSG00000090905	TNRC6A	100	95.000	Homo_sapiens
ENSPTIG00000006346	TNRC6A	98	95.300	ENSAMEG00000009333	TNRC6A	99	95.298	Ailuropoda_melanoleuca
ENSPTIG00000006346	TNRC6A	97	81.312	ENSAPLG00000009978	TNRC6A	100	81.312	Anas_platyrhynchos
ENSPTIG00000006346	TNRC6A	93	55.694	ENSACAG00000011857	TNRC6A	99	56.308	Anolis_carolinensis
ENSPTIG00000006346	TNRC6A	99	94.238	ENSANAG00000025252	TNRC6A	99	94.187	Aotus_nancymaae
ENSPTIG00000006346	TNRC6A	90	57.677	ENSAMXG00000019919	tnrc6a	100	57.441	Astyanax_mexicanus
ENSPTIG00000006346	TNRC6A	99	93.459	ENSBTAG00000017999	TNRC6A	99	93.145	Bos_taurus
ENSPTIG00000006346	TNRC6A	99	93.998	ENSCJAG00000020677	TNRC6A	99	94.201	Callithrix_jacchus
ENSPTIG00000006346	TNRC6A	99	95.255	ENSCAFG00000017531	TNRC6A	99	95.204	Canis_familiaris
ENSPTIG00000006346	TNRC6A	98	93.500	ENSCAFG00020021160	TNRC6A	99	93.927	Canis_lupus_dingo
ENSPTIG00000006346	TNRC6A	99	93.564	ENSCHIG00000019448	TNRC6A	99	100.000	Capra_hircus
ENSPTIG00000006346	TNRC6A	99	93.779	ENSTSYG00000012711	TNRC6A	99	93.779	Carlito_syrichta
ENSPTIG00000006346	TNRC6A	99	93.253	ENSCPOG00000036684	TNRC6A	100	93.201	Cavia_porcellus
ENSPTIG00000006346	TNRC6A	99	94.289	ENSCCAG00000033664	TNRC6A	99	94.238	Cebus_capucinus
ENSPTIG00000006346	TNRC6A	99	94.535	ENSCATG00000019284	TNRC6A	99	94.482	Cercocebus_atys
ENSPTIG00000006346	TNRC6A	99	89.906	ENSCLAG00000010217	TNRC6A	99	89.906	Chinchilla_lanigera
ENSPTIG00000006346	TNRC6A	99	94.697	ENSCSAG00000006561	TNRC6A	99	94.697	Chlorocebus_sabaeus
ENSPTIG00000006346	TNRC6A	95	90.674	ENSCHOG00000009374	TNRC6A	94	90.674	Choloepus_hoffmanni
ENSPTIG00000006346	TNRC6A	90	82.054	ENSCPBG00000001881	TNRC6A	99	82.054	Chrysemys_picta_bellii
ENSPTIG00000006346	TNRC6A	99	94.697	ENSCANG00000041549	TNRC6A	99	94.697	Colobus_angolensis_palliatus
ENSPTIG00000006346	TNRC6A	99	92.002	ENSCGRG00001015021	Tnrc6a	99	92.002	Cricetulus_griseus_chok1gshd
ENSPTIG00000006346	TNRC6A	99	90.957	ENSCGRG00000013351	Tnrc6a	99	90.800	Cricetulus_griseus_crigri
ENSPTIG00000006346	TNRC6A	90	56.902	ENSDARG00000079688	tnrc6a	99	57.047	Danio_rerio
ENSPTIG00000006346	TNRC6A	98	91.610	ENSDNOG00000013989	TNRC6A	99	91.558	Dasypus_novemcinctus
ENSPTIG00000006346	TNRC6A	98	83.438	ENSETEG00000014658	TNRC6A	99	83.386	Echinops_telfairi
ENSPTIG00000006346	TNRC6A	99	94.034	ENSEASG00005017693	TNRC6A	99	95.753	Equus_asinus_asinus
ENSPTIG00000006346	TNRC6A	99	94.034	ENSECAG00000025056	TNRC6A	99	95.753	Equus_caballus
ENSPTIG00000006346	TNRC6A	98	88.355	ENSEEUG00000004530	TNRC6A	99	88.303	Erinaceus_europaeus
ENSPTIG00000006346	TNRC6A	99	98.469	ENSFCAG00000025236	TNRC6A	100	98.450	Felis_catus
ENSPTIG00000006346	TNRC6A	99	78.733	ENSFALG00000003757	TNRC6A	99	79.427	Ficedula_albicollis
ENSPTIG00000006346	TNRC6A	90	81.970	ENSGALG00000006068	TNRC6A	99	82.767	Gallus_gallus
ENSPTIG00000006346	TNRC6A	90	81.379	ENSGAGG00000023209	TNRC6A	99	81.667	Gopherus_agassizii
ENSPTIG00000006346	TNRC6A	99	94.296	ENSGGOG00000005137	TNRC6A	99	94.245	Gorilla_gorilla
ENSPTIG00000006346	TNRC6A	93	73.684	ENSHGLG00000007368	-	93	73.236	Heterocephalus_glaber_female
ENSPTIG00000006346	TNRC6A	99	91.457	ENSHGLG00000012474	-	100	91.405	Heterocephalus_glaber_female
ENSPTIG00000006346	TNRC6A	99	91.352	ENSHGLG00100012496	-	100	91.562	Heterocephalus_glaber_male
ENSPTIG00000006346	TNRC6A	99	93.734	ENSSTOG00000023394	TNRC6A	99	93.683	Ictidomys_tridecemlineatus
ENSPTIG00000006346	TNRC6A	97	69.861	ENSLACG00000006277	TNRC6A	100	69.964	Latimeria_chalumnae
ENSPTIG00000006346	TNRC6A	99	83.223	ENSLOCG00000005517	tnrc6a	93	83.223	Lepisosteus_oculatus
ENSPTIG00000006346	TNRC6A	98	92.662	ENSLAFG00000004209	TNRC6A	99	92.712	Loxodonta_africana
ENSPTIG00000006346	TNRC6A	97	93.444	ENSMFAG00000003824	TNRC6A	99	93.392	Macaca_fascicularis
ENSPTIG00000006346	TNRC6A	99	94.493	ENSMMUG00000020428	TNRC6A	99	94.493	Macaca_mulatta
ENSPTIG00000006346	TNRC6A	99	94.151	ENSMNEG00000034854	TNRC6A	99	94.201	Macaca_nemestrina
ENSPTIG00000006346	TNRC6A	97	93.513	ENSMLEG00000042737	TNRC6A	97	93.254	Mandrillus_leucophaeus
ENSPTIG00000006346	TNRC6A	99	78.926	ENSMGAG00000006455	TNRC6A	99	80.131	Meleagris_gallopavo
ENSPTIG00000006346	TNRC6A	99	92.054	ENSMAUG00000012750	Tnrc6a	99	92.002	Mesocricetus_auratus
ENSPTIG00000006346	TNRC6A	99	94.810	ENSMICG00000030685	TNRC6A	99	94.758	Microcebus_murinus
ENSPTIG00000006346	TNRC6A	99	92.312	ENSMOCG00000000152	Tnrc6a	99	92.103	Microtus_ochrogaster
ENSPTIG00000006346	TNRC6A	99	80.218	ENSMODG00000016348	TNRC6A	99	81.309	Monodelphis_domestica
ENSPTIG00000006346	TNRC6A	99	90.933	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	93.209	Mus_caroli
ENSPTIG00000006346	TNRC6A	99	91.579	ENSMUSG00000052707	Tnrc6a	99	93.781	Mus_musculus
ENSPTIG00000006346	TNRC6A	99	91.517	MGP_PahariEiJ_G0013635	Tnrc6a	100	93.924	Mus_pahari
ENSPTIG00000006346	TNRC6A	99	91.535	MGP_SPRETEiJ_G0031539	Tnrc6a	100	93.495	Mus_spretus
ENSPTIG00000006346	TNRC6A	97	83.691	ENSMPUG00000012324	TNRC6A	100	83.906	Mustela_putorius_furo
ENSPTIG00000006346	TNRC6A	97	91.929	ENSMLUG00000002701	TNRC6A	100	91.929	Myotis_lucifugus
ENSPTIG00000006346	TNRC6A	99	92.734	ENSNGAG00000020702	Tnrc6a	100	92.734	Nannospalax_galili
ENSPTIG00000006346	TNRC6A	97	92.271	ENSNLEG00000011851	TNRC6A	98	92.432	Nomascus_leucogenys
ENSPTIG00000006346	TNRC6A	77	89.037	ENSMEUG00000015959	-	77	89.037	Notamacropus_eugenii
ENSPTIG00000006346	TNRC6A	96	98.507	ENSOPRG00000005819	TNRC6A	96	98.507	Ochotona_princeps
ENSPTIG00000006346	TNRC6A	99	88.245	ENSODEG00000012802	TNRC6A	99	88.350	Octodon_degus
ENSPTIG00000006346	TNRC6A	87	83.198	ENSOANG00000007672	TNRC6A	100	83.198	Ornithorhynchus_anatinus
ENSPTIG00000006346	TNRC6A	97	91.309	ENSOCUG00000004325	TNRC6A	100	91.204	Oryctolagus_cuniculus
ENSPTIG00000006346	TNRC6A	99	93.994	ENSOGAG00000006666	TNRC6A	100	93.943	Otolemur_garnettii
ENSPTIG00000006346	TNRC6A	99	92.828	ENSOARG00000017950	TNRC6A	98	95.105	Ovis_aries
ENSPTIG00000006346	TNRC6A	99	94.300	ENSPPAG00000028379	TNRC6A	100	94.249	Pan_paniscus
ENSPTIG00000006346	TNRC6A	99	98.571	ENSPPRG00000005861	TNRC6A	99	98.571	Panthera_pardus
ENSPTIG00000006346	TNRC6A	99	92.430	ENSPTRG00000007898	TNRC6A	99	93.854	Pan_troglodytes
ENSPTIG00000006346	TNRC6A	99	92.410	ENSPANG00000018523	TNRC6A	99	92.410	Papio_anubis
ENSPTIG00000006346	TNRC6A	90	78.054	ENSPKIG00000012859	tnrc6a	96	79.459	Paramormyrops_kingsleyae
ENSPTIG00000006346	TNRC6A	76	77.703	ENSPSIG00000003965	TNRC6A	100	77.703	Pelodiscus_sinensis
ENSPTIG00000006346	TNRC6A	99	92.312	ENSPEMG00000016318	Tnrc6a	100	92.155	Peromyscus_maniculatus_bairdii
ENSPTIG00000006346	TNRC6A	97	82.881	ENSPCIG00000012106	TNRC6A	100	82.985	Phascolarctos_cinereus
ENSPTIG00000006346	TNRC6A	99	93.833	ENSPPYG00000007202	TNRC6A	100	93.884	Pongo_abelii
ENSPTIG00000006346	TNRC6A	95	96.907	ENSPCAG00000008260	TNRC6A	94	96.907	Procavia_capensis
ENSPTIG00000006346	TNRC6A	99	92.249	ENSPCOG00000010134	TNRC6A	99	92.147	Propithecus_coquereli
ENSPTIG00000006346	TNRC6A	89	71.069	ENSPVAG00000012066	TNRC6A	99	70.955	Pteropus_vampyrus
ENSPTIG00000006346	TNRC6A	99	91.593	ENSRNOG00000024737	Tnrc6a	99	91.488	Rattus_norvegicus
ENSPTIG00000006346	TNRC6A	98	94.360	ENSRBIG00000014222	TNRC6A	99	94.360	Rhinopithecus_bieti
ENSPTIG00000006346	TNRC6A	99	94.391	ENSRROG00000032360	TNRC6A	99	94.391	Rhinopithecus_roxellana
ENSPTIG00000006346	TNRC6A	98	93.789	ENSSBOG00000036197	TNRC6A	100	96.197	Saimiri_boliviensis_boliviensis
ENSPTIG00000006346	TNRC6A	90	83.419	ENSSHAG00000008811	TNRC6A	99	83.875	Sarcophilus_harrisii
ENSPTIG00000006346	TNRC6A	87	67.365	ENSSFOG00015008920	tnrc6a	95	82.561	Scleropages_formosus
ENSPTIG00000006346	TNRC6A	72	82.971	ENSSARG00000002479	TNRC6A	89	82.246	Sorex_araneus
ENSPTIG00000006346	TNRC6A	90	78.400	ENSSPUG00000010525	TNRC6A	100	78.791	Sphenodon_punctatus
ENSPTIG00000006346	TNRC6A	99	94.302	ENSSSCG00000038870	TNRC6A	98	100.000	Sus_scrofa
ENSPTIG00000006346	TNRC6A	99	79.251	ENSTGUG00000006142	TNRC6A	99	79.875	Taeniopygia_guttata
ENSPTIG00000006346	TNRC6A	98	91.545	ENSTBEG00000014965	TNRC6A	99	91.488	Tupaia_belangeri
ENSPTIG00000006346	TNRC6A	94	97.303	ENSTTRG00000002008	TNRC6A	93	97.303	Tursiops_truncatus
ENSPTIG00000006346	TNRC6A	79	94.293	ENSUAMG00000006656	-	93	94.227	Ursus_americanus
ENSPTIG00000006346	TNRC6A	97	95.300	ENSUMAG00000008274	TNRC6A	100	97.167	Ursus_maritimus
ENSPTIG00000006346	TNRC6A	57	84.828	ENSVPAG00000010764	-	57	84.828	Vicugna_pacos
ENSPTIG00000006346	TNRC6A	99	95.116	ENSVVUG00000005380	TNRC6A	99	95.064	Vulpes_vulpes
ENSPTIG00000006346	TNRC6A	93	65.610	ENSXETG00000030437	TNRC6A	99	65.930	Xenopus_tropicalis