EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000006378 (Gene tree)
Gene ID: 102957116
Gene Symbol: TRUB1
Alias: -
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 39682 bases
Position: chrKE721806.1:1515699-1555380
Accession: 102957116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000003684	TruB_N	PF01509.18	2.9e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000007391	TRUB1-201	3403	XM_007084844	ENSPTIP00000003684	349 (aa)	XP_007084906	UPI00042BC96C

Gene Model

Click here to download ENSPTIG00000006378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000006378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000006378	TRUB1	72	30.241	ENSPTIG00000012366	TRUB2	90	30.241

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000006378	TRUB1	99	92.529	ENSG00000165832	TRUB1	96	92.836	Homo_sapiens
ENSPTIG00000006378	TRUB1	70	68.980	ENSAPOG00000020565	trub1	89	68.699	Acanthochromis_polyacanthus
ENSPTIG00000006378	TRUB1	97	94.100	ENSAMEG00000014931	TRUB1	96	94.100	Ailuropoda_melanoleuca
ENSPTIG00000006378	TRUB1	81	57.394	ENSACIG00000003060	trub1	94	57.394	Amphilophus_citrinellus
ENSPTIG00000006378	TRUB1	70	68.980	ENSAOCG00000017188	trub1	89	68.699	Amphiprion_ocellaris
ENSPTIG00000006378	TRUB1	70	68.293	ENSAPEG00000015209	trub1	93	66.148	Amphiprion_percula
ENSPTIG00000006378	TRUB1	69	68.880	ENSATEG00000023291	trub1	86	68.880	Anabas_testudineus
ENSPTIG00000006378	TRUB1	79	76.364	ENSAPLG00000006808	TRUB1	99	76.364	Anas_platyrhynchos
ENSPTIG00000006378	TRUB1	78	71.429	ENSACAG00000009282	TRUB1	99	71.429	Anolis_carolinensis
ENSPTIG00000006378	TRUB1	96	93.713	ENSANAG00000022870	TRUB1	95	93.731	Aotus_nancymaae
ENSPTIG00000006378	TRUB1	72	67.063	ENSACLG00000000823	trub1	91	67.063	Astatotilapia_calliptera
ENSPTIG00000006378	TRUB1	75	67.050	ENSAMXG00000015845	trub1	87	67.050	Astyanax_mexicanus
ENSPTIG00000006378	TRUB1	98	92.962	ENSBTAG00000012955	TRUB1	95	93.731	Bos_taurus
ENSPTIG00000006378	TRUB1	99	92.264	ENSCJAG00000047815	TRUB1	95	93.433	Callithrix_jacchus
ENSPTIG00000006378	TRUB1	99	94.540	ENSCAFG00000011688	TRUB1	96	94.925	Canis_familiaris
ENSPTIG00000006378	TRUB1	99	94.828	ENSCAFG00020013237	TRUB1	96	95.224	Canis_lupus_dingo
ENSPTIG00000006378	TRUB1	98	92.669	ENSCHIG00000020884	TRUB1	94	94.545	Capra_hircus
ENSPTIG00000006378	TRUB1	99	91.117	ENSTSYG00000000446	TRUB1	85	95.000	Carlito_syrichta
ENSPTIG00000006378	TRUB1	72	84.524	ENSCAPG00000017088	TRUB1	99	84.524	Cavia_aperea
ENSPTIG00000006378	TRUB1	70	84.426	ENSCPOG00000040236	-	95	85.345	Cavia_porcellus
ENSPTIG00000006378	TRUB1	71	79.757	ENSCPOG00000030129	-	76	92.308	Cavia_porcellus
ENSPTIG00000006378	TRUB1	96	93.134	ENSCCAG00000028842	TRUB1	95	93.134	Cebus_capucinus
ENSPTIG00000006378	TRUB1	99	91.954	ENSCATG00000033431	TRUB1	96	92.537	Cercocebus_atys
ENSPTIG00000006378	TRUB1	70	87.705	ENSCLAG00000008664	TRUB1	95	88.362	Chinchilla_lanigera
ENSPTIG00000006378	TRUB1	99	92.241	ENSCSAG00000004891	TRUB1	96	92.836	Chlorocebus_sabaeus
ENSPTIG00000006378	TRUB1	99	78.035	ENSCHOG00000011931	TRUB1	95	78.078	Choloepus_hoffmanni
ENSPTIG00000006378	TRUB1	78	79.779	ENSCPBG00000003051	TRUB1	94	79.779	Chrysemys_picta_bellii
ENSPTIG00000006378	TRUB1	99	92.241	ENSCANG00000029445	TRUB1	96	92.836	Colobus_angolensis_palliatus
ENSPTIG00000006378	TRUB1	80	80.287	ENSCGRG00001010322	-	79	80.272	Cricetulus_griseus_chok1gshd
ENSPTIG00000006378	TRUB1	72	88.142	ENSCGRG00001016772	-	90	79.730	Cricetulus_griseus_chok1gshd
ENSPTIG00000006378	TRUB1	80	89.247	ENSCGRG00000010806	Trub1	91	88.514	Cricetulus_griseus_crigri
ENSPTIG00000006378	TRUB1	73	62.891	ENSCSEG00000011261	trub1	98	56.954	Cynoglossus_semilaevis
ENSPTIG00000006378	TRUB1	70	68.163	ENSCVAG00000008791	trub1	78	66.667	Cyprinodon_variegatus
ENSPTIG00000006378	TRUB1	75	67.300	ENSDARG00000053805	trub1	90	67.300	Danio_rerio
ENSPTIG00000006378	TRUB1	97	87.870	ENSDNOG00000001069	TRUB1	95	88.323	Dasypus_novemcinctus
ENSPTIG00000006378	TRUB1	99	88.218	ENSDORG00000010431	Trub1	87	93.667	Dipodomys_ordii
ENSPTIG00000006378	TRUB1	81	77.941	ENSETEG00000009183	TRUB1	66	86.577	Echinops_telfairi
ENSPTIG00000006378	TRUB1	96	94.627	ENSEASG00005014739	TRUB1	96	94.627	Equus_asinus_asinus
ENSPTIG00000006378	TRUB1	96	94.627	ENSECAG00000007177	TRUB1	96	94.627	Equus_caballus
ENSPTIG00000006378	TRUB1	99	77.031	ENSEEUG00000013993	TRUB1	83	82.886	Erinaceus_europaeus
ENSPTIG00000006378	TRUB1	70	69.796	ENSELUG00000000502	trub1	86	69.796	Esox_lucius
ENSPTIG00000006378	TRUB1	100	99.140	ENSFCAG00000031927	TRUB1	100	99.140	Felis_catus
ENSPTIG00000006378	TRUB1	69	77.083	ENSFALG00000002232	TRUB1	92	77.083	Ficedula_albicollis
ENSPTIG00000006378	TRUB1	70	86.475	ENSFDAG00000008140	TRUB1	95	88.362	Fukomys_damarensis
ENSPTIG00000006378	TRUB1	70	66.531	ENSFHEG00000004016	trub1	84	66.531	Fundulus_heteroclitus
ENSPTIG00000006378	TRUB1	78	75.368	ENSGALG00000009091	TRUB1	97	74.528	Gallus_gallus
ENSPTIG00000006378	TRUB1	68	65.000	ENSGAFG00000009193	trub1	89	63.137	Gambusia_affinis
ENSPTIG00000006378	TRUB1	56	68.205	ENSGACG00000015387	trub1	96	68.205	Gasterosteus_aculeatus
ENSPTIG00000006378	TRUB1	89	73.139	ENSGAGG00000009758	TRUB1	81	78.169	Gopherus_agassizii
ENSPTIG00000006378	TRUB1	99	92.816	ENSGGOG00000004583	TRUB1	96	93.433	Gorilla_gorilla
ENSPTIG00000006378	TRUB1	77	64.419	ENSHBUG00000016787	trub1	95	64.528	Haplochromis_burtoni
ENSPTIG00000006378	TRUB1	99	86.455	ENSHGLG00000015314	TRUB1	86	90.000	Heterocephalus_glaber_female
ENSPTIG00000006378	TRUB1	70	84.836	ENSHGLG00100009183	TRUB1	83	92.386	Heterocephalus_glaber_male
ENSPTIG00000006378	TRUB1	74	66.537	ENSHCOG00000017877	trub1	93	66.537	Hippocampus_comes
ENSPTIG00000006378	TRUB1	77	66.667	ENSIPUG00000017559	trub1	94	66.667	Ictalurus_punctatus
ENSPTIG00000006378	TRUB1	86	93.333	ENSSTOG00000003641	TRUB1	90	93.333	Ictidomys_tridecemlineatus
ENSPTIG00000006378	TRUB1	99	83.046	ENSJJAG00000011800	Trub1	88	90.604	Jaculus_jaculus
ENSPTIG00000006378	TRUB1	72	65.759	ENSKMAG00000006232	trub1	92	65.759	Kryptolebias_marmoratus
ENSPTIG00000006378	TRUB1	76	64.286	ENSLBEG00000026722	trub1	92	64.286	Labrus_bergylta
ENSPTIG00000006378	TRUB1	79	73.913	ENSLACG00000014885	TRUB1	92	73.913	Latimeria_chalumnae
ENSPTIG00000006378	TRUB1	79	71.119	ENSLOCG00000012979	trub1	92	71.795	Lepisosteus_oculatus
ENSPTIG00000006378	TRUB1	99	80.337	ENSLAFG00000015452	TRUB1	85	85.619	Loxodonta_africana
ENSPTIG00000006378	TRUB1	99	91.954	ENSMFAG00000031767	TRUB1	96	92.537	Macaca_fascicularis
ENSPTIG00000006378	TRUB1	99	92.241	ENSMMUG00000001902	TRUB1	96	92.836	Macaca_mulatta
ENSPTIG00000006378	TRUB1	99	87.931	ENSMNEG00000044646	TRUB1	96	88.358	Macaca_nemestrina
ENSPTIG00000006378	TRUB1	99	91.954	ENSMLEG00000042655	TRUB1	96	92.537	Mandrillus_leucophaeus
ENSPTIG00000006378	TRUB1	72	67.063	ENSMZEG00005024095	trub1	91	67.063	Maylandia_zebra
ENSPTIG00000006378	TRUB1	78	74.265	ENSMGAG00000011135	TRUB1	93	74.265	Meleagris_gallopavo
ENSPTIG00000006378	TRUB1	80	86.022	ENSMAUG00000011101	Trub1	88	85.619	Mesocricetus_auratus
ENSPTIG00000006378	TRUB1	99	94.236	ENSMICG00000016324	TRUB1	96	94.328	Microcebus_murinus
ENSPTIG00000006378	TRUB1	99	79.827	ENSMOCG00000017759	Trub1	91	87.333	Microtus_ochrogaster
ENSPTIG00000006378	TRUB1	77	85.556	ENSMODG00000009676	TRUB1	82	80.471	Monodelphis_domestica
ENSPTIG00000006378	TRUB1	99	82.421	MGP_CAROLIEiJ_G0023100	Trub1	89	86.667	Mus_caroli
ENSPTIG00000006378	TRUB1	99	81.268	ENSMUSG00000025086	Trub1	89	85.667	Mus_musculus
ENSPTIG00000006378	TRUB1	99	82.133	MGP_PahariEiJ_G0014588	Trub1	89	86.333	Mus_pahari
ENSPTIG00000006378	TRUB1	99	81.556	MGP_SPRETEiJ_G0024021	Trub1	89	86.000	Mus_spretus
ENSPTIG00000006378	TRUB1	97	94.955	ENSMPUG00000003556	TRUB1	96	94.955	Mustela_putorius_furo
ENSPTIG00000006378	TRUB1	95	87.988	ENSMLUG00000017686	TRUB1	95	87.463	Myotis_lucifugus
ENSPTIG00000006378	TRUB1	99	87.032	ENSNGAG00000018682	Trub1	86	92.333	Nannospalax_galili
ENSPTIG00000006378	TRUB1	70	68.293	ENSNBRG00000023393	trub1	88	68.293	Neolamprologus_brichardi
ENSPTIG00000006378	TRUB1	96	92.537	ENSNLEG00000016345	TRUB1	96	92.537	Nomascus_leucogenys
ENSPTIG00000006378	TRUB1	58	90.050	ENSMEUG00000006603	TRUB1	78	87.678	Notamacropus_eugenii
ENSPTIG00000006378	TRUB1	86	85.667	ENSOPRG00000009371	TRUB1	87	85.667	Ochotona_princeps
ENSPTIG00000006378	TRUB1	99	84.150	ENSODEG00000010854	TRUB1	96	84.776	Octodon_degus
ENSPTIG00000006378	TRUB1	70	67.480	ENSONIG00000007249	trub1	89	67.480	Oreochromis_niloticus
ENSPTIG00000006378	TRUB1	79	80.657	ENSOANG00000001556	TRUB1	93	78.445	Ornithorhynchus_anatinus
ENSPTIG00000006378	TRUB1	99	85.303	ENSOCUG00000009456	TRUB1	95	88.485	Oryctolagus_cuniculus
ENSPTIG00000006378	TRUB1	69	69.295	ENSORLG00000029719	trub1	91	66.798	Oryzias_latipes
ENSPTIG00000006378	TRUB1	69	68.880	ENSORLG00020016767	trub1	89	66.403	Oryzias_latipes_hni
ENSPTIG00000006378	TRUB1	69	68.880	ENSORLG00015014728	trub1	91	66.403	Oryzias_latipes_hsok
ENSPTIG00000006378	TRUB1	80	63.475	ENSOMEG00000014556	trub1	90	66.926	Oryzias_melastigma
ENSPTIG00000006378	TRUB1	99	93.678	ENSOGAG00000015895	TRUB1	96	94.925	Otolemur_garnettii
ENSPTIG00000006378	TRUB1	97	89.049	ENSOARG00000015591	TRUB1	87	92.787	Ovis_aries
ENSPTIG00000006378	TRUB1	99	93.103	ENSPPAG00000043645	TRUB1	96	93.433	Pan_paniscus
ENSPTIG00000006378	TRUB1	100	99.713	ENSPPRG00000007096	TRUB1	100	99.713	Panthera_pardus
ENSPTIG00000006378	TRUB1	99	93.103	ENSPTRG00000002964	TRUB1	96	93.433	Pan_troglodytes
ENSPTIG00000006378	TRUB1	99	92.241	ENSPANG00000020712	TRUB1	96	92.836	Papio_anubis
ENSPTIG00000006378	TRUB1	78	77.574	ENSPSIG00000012877	TRUB1	93	77.574	Pelodiscus_sinensis
ENSPTIG00000006378	TRUB1	70	65.714	ENSPMGG00000000075	trub1	88	65.714	Periophthalmus_magnuspinnatus
ENSPTIG00000006378	TRUB1	99	78.098	ENSPEMG00000011156	Trub1	88	85.284	Peromyscus_maniculatus_bairdii
ENSPTIG00000006378	TRUB1	82	81.185	ENSPCIG00000009729	TRUB1	81	79.798	Phascolarctos_cinereus
ENSPTIG00000006378	TRUB1	70	66.122	ENSPFOG00000009950	trub1	90	66.122	Poecilia_formosa
ENSPTIG00000006378	TRUB1	70	66.122	ENSPLAG00000013855	trub1	86	66.122	Poecilia_latipinna
ENSPTIG00000006378	TRUB1	70	66.122	ENSPMEG00000009064	trub1	88	66.122	Poecilia_mexicana
ENSPTIG00000006378	TRUB1	70	66.939	ENSPREG00000003343	trub1	88	66.939	Poecilia_reticulata
ENSPTIG00000006378	TRUB1	96	92.836	ENSPPYG00000002676	TRUB1	96	92.836	Pongo_abelii
ENSPTIG00000006378	TRUB1	99	76.638	ENSPCAG00000008427	TRUB1	95	75.074	Procavia_capensis
ENSPTIG00000006378	TRUB1	99	88.473	ENSPCOG00000024360	TRUB1	95	88.623	Propithecus_coquereli
ENSPTIG00000006378	TRUB1	75	94.297	ENSPVAG00000007575	TRUB1	95	94.422	Pteropus_vampyrus
ENSPTIG00000006378	TRUB1	72	67.063	ENSPNYG00000018614	trub1	91	67.063	Pundamilia_nyererei
ENSPTIG00000006378	TRUB1	74	59.615	ENSPNAG00000006881	trub1	84	59.615	Pygocentrus_nattereri
ENSPTIG00000006378	TRUB1	99	82.133	ENSRNOG00000017321	Trub1	88	86.667	Rattus_norvegicus
ENSPTIG00000006378	TRUB1	99	82.184	ENSRBIG00000033423	TRUB1	95	82.388	Rhinopithecus_bieti
ENSPTIG00000006378	TRUB1	99	91.954	ENSRROG00000033902	TRUB1	96	92.537	Rhinopithecus_roxellana
ENSPTIG00000006378	TRUB1	96	93.134	ENSSBOG00000024237	TRUB1	95	93.134	Saimiri_boliviensis_boliviensis
ENSPTIG00000006378	TRUB1	73	79.767	ENSSHAG00000009346	TRUB1	86	79.767	Sarcophilus_harrisii
ENSPTIG00000006378	TRUB1	73	68.504	ENSSFOG00015022124	trub1	87	68.504	Scleropages_formosus
ENSPTIG00000006378	TRUB1	70	68.699	ENSSMAG00000001020	trub1	88	68.699	Scophthalmus_maximus
ENSPTIG00000006378	TRUB1	69	69.167	ENSSDUG00000016414	trub1	92	66.926	Seriola_dumerili
ENSPTIG00000006378	TRUB1	69	69.583	ENSSLDG00000015486	trub1	92	67.315	Seriola_lalandi_dorsalis
ENSPTIG00000006378	TRUB1	78	79.779	ENSSPUG00000001642	TRUB1	93	79.779	Sphenodon_punctatus
ENSPTIG00000006378	TRUB1	75	66.920	ENSSPAG00000001217	trub1	94	66.920	Stegastes_partitus
ENSPTIG00000006378	TRUB1	99	89.080	ENSSSCG00000010653	TRUB1	96	89.552	Sus_scrofa
ENSPTIG00000006378	TRUB1	77	76.667	ENSTGUG00000010971	TRUB1	100	75.445	Taeniopygia_guttata
ENSPTIG00000006378	TRUB1	73	77.165	ENSTBEG00000002880	TRUB1	100	77.165	Tupaia_belangeri
ENSPTIG00000006378	TRUB1	72	88.446	ENSTTRG00000005767	TRUB1	95	92.032	Tursiops_truncatus
ENSPTIG00000006378	TRUB1	97	96.142	ENSUAMG00000024876	TRUB1	96	96.142	Ursus_americanus
ENSPTIG00000006378	TRUB1	97	92.582	ENSUMAG00000002411	TRUB1	96	91.988	Ursus_maritimus
ENSPTIG00000006378	TRUB1	99	93.391	ENSVPAG00000005507	TRUB1	96	93.731	Vicugna_pacos
ENSPTIG00000006378	TRUB1	99	93.103	ENSVVUG00000010085	TRUB1	80	94.328	Vulpes_vulpes
ENSPTIG00000006378	TRUB1	78	67.279	ENSXETG00000023828	trub1	98	67.279	Xenopus_tropicalis
ENSPTIG00000006378	TRUB1	68	65.690	ENSXCOG00000017847	trub1	86	65.021	Xiphophorus_couchianus
ENSPTIG00000006378	TRUB1	70	65.306	ENSXMAG00000014701	trub1	88	65.306	Xiphophorus_maculatus