EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000006380 (Gene tree)
Gene ID: 102964806
Gene Symbol: SNRNP200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 28355 bases
Position: chrKE721764.1:5266790-5295144
Accession: 102964806
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000003790	ResIII	PF04851.15	5.3e-26	1	2
ENSPTIP00000003790	ResIII	PF04851.15	5.3e-26	2	2
ENSPTIP00000003790	DEAD	PF00270.29	3.5e-52	1	2
ENSPTIP00000003790	DEAD	PF00270.29	3.5e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000007499	SNRNP200-201	6381	XM_007082379	ENSPTIP00000003790	2126 (aa)	XP_007082441	-

Gene Model

Click here to download ENSPTIG00000006380's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000006380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000006380	SNRNP200	86	42.167	ENSPTIG00000006331	ASCC3	80	44.307
ENSPTIG00000006380	SNRNP200	75	31.098	ENSPTIG00000018881	HFM1	58	31.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000006380	SNRNP200	100	99.438	ENSG00000144028	SNRNP200	100	99.438	Homo_sapiens
ENSPTIG00000006380	SNRNP200	99	90.559	ENSAPOG00000010223	snrnp200	99	90.449	Acanthochromis_polyacanthus
ENSPTIG00000006380	SNRNP200	100	99.485	ENSAMEG00000008996	SNRNP200	100	99.485	Ailuropoda_melanoleuca
ENSPTIG00000006380	SNRNP200	97	89.829	ENSACIG00000001764	snrnp200	98	89.829	Amphilophus_citrinellus
ENSPTIG00000006380	SNRNP200	99	90.465	ENSAOCG00000024593	snrnp200	100	89.615	Amphiprion_ocellaris
ENSPTIG00000006380	SNRNP200	97	89.668	ENSAPEG00000012554	snrnp200	100	89.668	Amphiprion_percula
ENSPTIG00000006380	SNRNP200	99	90.324	ENSATEG00000022522	snrnp200	99	90.215	Anabas_testudineus
ENSPTIG00000006380	SNRNP200	99	97.407	ENSAPLG00000004313	SNRNP200	100	97.407	Anas_platyrhynchos
ENSPTIG00000006380	SNRNP200	99	97.031	ENSACAG00000000434	SNRNP200	100	97.031	Anolis_carolinensis
ENSPTIG00000006380	SNRNP200	100	94.869	ENSANAG00000036625	SNRNP200	100	95.289	Aotus_nancymaae
ENSPTIG00000006380	SNRNP200	99	90.183	ENSACLG00000011188	snrnp200	99	90.075	Astatotilapia_calliptera
ENSPTIG00000006380	SNRNP200	99	90.277	ENSAMXG00000005684	snrnp200	99	90.169	Astyanax_mexicanus
ENSPTIG00000006380	SNRNP200	100	98.923	ENSBTAG00000000848	SNRNP200	100	98.923	Bos_taurus
ENSPTIG00000006380	SNRNP200	100	99.391	ENSCJAG00000007514	SNRNP200	100	99.391	Callithrix_jacchus
ENSPTIG00000006380	SNRNP200	100	98.693	ENSCAFG00020019979	SNRNP200	100	99.417	Canis_lupus_dingo
ENSPTIG00000006380	SNRNP200	100	99.110	ENSCHIG00000020611	SNRNP200	100	99.110	Capra_hircus
ENSPTIG00000006380	SNRNP200	100	99.438	ENSTSYG00000010467	SNRNP200	100	99.438	Carlito_syrichta
ENSPTIG00000006380	SNRNP200	99	98.966	ENSCAPG00000017234	SNRNP200	99	98.966	Cavia_aperea
ENSPTIG00000006380	SNRNP200	100	99.251	ENSCPOG00000006776	SNRNP200	100	99.251	Cavia_porcellus
ENSPTIG00000006380	SNRNP200	100	99.391	ENSCCAG00000033962	SNRNP200	100	99.391	Cebus_capucinus
ENSPTIG00000006380	SNRNP200	100	99.438	ENSCATG00000015790	SNRNP200	100	99.438	Cercocebus_atys
ENSPTIG00000006380	SNRNP200	100	99.110	ENSCLAG00000004116	SNRNP200	100	99.110	Chinchilla_lanigera
ENSPTIG00000006380	SNRNP200	100	99.391	ENSCSAG00000017369	SNRNP200	100	99.391	Chlorocebus_sabaeus
ENSPTIG00000006380	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSPTIG00000006380	SNRNP200	100	97.429	ENSCPBG00000022571	SNRNP200	100	97.429	Chrysemys_picta_bellii
ENSPTIG00000006380	SNRNP200	99	76.273	ENSCING00000005082	-	99	76.413	Ciona_intestinalis
ENSPTIG00000006380	SNRNP200	100	93.928	ENSCANG00000033932	SNRNP200	100	99.353	Colobus_angolensis_palliatus
ENSPTIG00000006380	SNRNP200	100	99.298	ENSCGRG00001022610	Snrnp200	100	99.298	Cricetulus_griseus_chok1gshd
ENSPTIG00000006380	SNRNP200	100	98.738	ENSCGRG00000016472	Snrnp200	100	98.738	Cricetulus_griseus_crigri
ENSPTIG00000006380	SNRNP200	100	89.607	ENSCSEG00000016399	snrnp200	100	89.607	Cynoglossus_semilaevis
ENSPTIG00000006380	SNRNP200	100	85.300	ENSCVAG00000017631	snrnp200	99	85.300	Cyprinodon_variegatus
ENSPTIG00000006380	SNRNP200	100	90.028	ENSDARG00000077536	snrnp200	99	90.028	Danio_rerio
ENSPTIG00000006380	SNRNP200	100	97.893	ENSDNOG00000011227	SNRNP200	100	97.893	Dasypus_novemcinctus
ENSPTIG00000006380	SNRNP200	100	96.681	ENSDORG00000005861	Snrnp200	100	96.681	Dipodomys_ordii
ENSPTIG00000006380	SNRNP200	100	74.069	FBgn0263599	l(3)72Ab	99	73.976	Drosophila_melanogaster
ENSPTIG00000006380	SNRNP200	95	99.742	ENSETEG00000000162	SNRNP200	74	99.742	Echinops_telfairi
ENSPTIG00000006380	SNRNP200	83	81.345	ENSEBUG00000016524	snrnp200	95	81.345	Eptatretus_burgeri
ENSPTIG00000006380	SNRNP200	100	98.368	ENSEASG00005001884	SNRNP200	100	98.368	Equus_asinus_asinus
ENSPTIG00000006380	SNRNP200	100	99.485	ENSECAG00000019675	SNRNP200	100	99.485	Equus_caballus
ENSPTIG00000006380	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSPTIG00000006380	SNRNP200	99	90.512	ENSELUG00000018948	snrnp200	99	90.403	Esox_lucius
ENSPTIG00000006380	SNRNP200	100	99.532	ENSFCAG00000010699	SNRNP200	100	99.532	Felis_catus
ENSPTIG00000006380	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSPTIG00000006380	SNRNP200	100	99.157	ENSFDAG00000004683	SNRNP200	100	99.157	Fukomys_damarensis
ENSPTIG00000006380	SNRNP200	100	87.453	ENSFHEG00000003786	snrnp200	99	87.453	Fundulus_heteroclitus
ENSPTIG00000006380	SNRNP200	100	89.346	ENSGMOG00000004881	snrnp200	99	89.299	Gadus_morhua
ENSPTIG00000006380	SNRNP200	100	87.687	ENSGAFG00000010807	snrnp200	99	87.687	Gambusia_affinis
ENSPTIG00000006380	SNRNP200	100	89.678	ENSGACG00000011474	snrnp200	99	89.584	Gasterosteus_aculeatus
ENSPTIG00000006380	SNRNP200	95	97.326	ENSGAGG00000016069	SNRNP200	99	97.326	Gopherus_agassizii
ENSPTIG00000006380	SNRNP200	100	99.438	ENSGGOG00000005174	SNRNP200	100	99.438	Gorilla_gorilla
ENSPTIG00000006380	SNRNP200	97	87.353	ENSHBUG00000011322	snrnp200	99	87.400	Haplochromis_burtoni
ENSPTIG00000006380	SNRNP200	100	99.251	ENSHGLG00000006654	SNRNP200	100	99.251	Heterocephalus_glaber_female
ENSPTIG00000006380	SNRNP200	100	99.251	ENSHGLG00100018594	SNRNP200	100	99.251	Heterocephalus_glaber_male
ENSPTIG00000006380	SNRNP200	100	99.391	ENSSTOG00000016351	SNRNP200	100	99.391	Ictidomys_tridecemlineatus
ENSPTIG00000006380	SNRNP200	100	99.204	ENSJJAG00000023659	Snrnp200	100	99.204	Jaculus_jaculus
ENSPTIG00000006380	SNRNP200	100	87.214	ENSKMAG00000003665	snrnp200	99	87.214	Kryptolebias_marmoratus
ENSPTIG00000006380	SNRNP200	100	89.934	ENSLBEG00000021585	snrnp200	99	89.934	Labrus_bergylta
ENSPTIG00000006380	SNRNP200	82	94.320	ENSLACG00000000226	SNRNP200	99	94.320	Latimeria_chalumnae
ENSPTIG00000006380	SNRNP200	100	91.901	ENSLOCG00000015198	snrnp200	99	91.901	Lepisosteus_oculatus
ENSPTIG00000006380	SNRNP200	100	99.110	ENSLAFG00000015626	SNRNP200	100	99.110	Loxodonta_africana
ENSPTIG00000006380	SNRNP200	100	99.391	ENSMFAG00000040174	SNRNP200	100	99.391	Macaca_fascicularis
ENSPTIG00000006380	SNRNP200	100	99.391	ENSMMUG00000023261	SNRNP200	100	99.391	Macaca_mulatta
ENSPTIG00000006380	SNRNP200	100	99.345	ENSMNEG00000032398	SNRNP200	100	99.345	Macaca_nemestrina
ENSPTIG00000006380	SNRNP200	100	99.438	ENSMLEG00000019083	SNRNP200	100	99.438	Mandrillus_leucophaeus
ENSPTIG00000006380	SNRNP200	100	89.892	ENSMAMG00000007851	snrnp200	99	89.846	Mastacembelus_armatus
ENSPTIG00000006380	SNRNP200	97	87.353	ENSMZEG00005010787	snrnp200	99	87.400	Maylandia_zebra
ENSPTIG00000006380	SNRNP200	97	96.952	ENSMGAG00000001831	SNRNP200	100	96.952	Meleagris_gallopavo
ENSPTIG00000006380	SNRNP200	100	99.345	ENSMAUG00000011825	Snrnp200	100	99.345	Mesocricetus_auratus
ENSPTIG00000006380	SNRNP200	100	99.391	ENSMICG00000004710	SNRNP200	100	99.391	Microcebus_murinus
ENSPTIG00000006380	SNRNP200	100	96.770	ENSMOCG00000011814	Snrnp200	100	96.770	Microtus_ochrogaster
ENSPTIG00000006380	SNRNP200	99	88.680	ENSMMOG00000014167	snrnp200	99	88.577	Mola_mola
ENSPTIG00000006380	SNRNP200	100	98.596	ENSMODG00000008475	SNRNP200	100	98.596	Monodelphis_domestica
ENSPTIG00000006380	SNRNP200	99	90.465	ENSMALG00000001973	snrnp200	99	90.356	Monopterus_albus
ENSPTIG00000006380	SNRNP200	100	99.157	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.157	Mus_caroli
ENSPTIG00000006380	SNRNP200	100	99.204	ENSMUSG00000003660	Snrnp200	100	99.204	Mus_musculus
ENSPTIG00000006380	SNRNP200	100	99.251	MGP_PahariEiJ_G0025695	Snrnp200	100	99.251	Mus_pahari
ENSPTIG00000006380	SNRNP200	100	99.204	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.448	Mus_spretus
ENSPTIG00000006380	SNRNP200	100	99.438	ENSMPUG00000008949	SNRNP200	100	99.438	Mustela_putorius_furo
ENSPTIG00000006380	SNRNP200	100	95.178	ENSMLUG00000027511	-	100	95.178	Myotis_lucifugus
ENSPTIG00000006380	SNRNP200	100	98.831	ENSMLUG00000010493	SNRNP200	100	98.831	Myotis_lucifugus
ENSPTIG00000006380	SNRNP200	100	99.438	ENSNGAG00000021993	Snrnp200	100	99.438	Nannospalax_galili
ENSPTIG00000006380	SNRNP200	90	89.855	ENSNBRG00000017960	snrnp200	98	89.855	Neolamprologus_brichardi
ENSPTIG00000006380	SNRNP200	100	94.793	ENSNLEG00000000025	SNRNP200	100	95.593	Nomascus_leucogenys
ENSPTIG00000006380	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSPTIG00000006380	SNRNP200	100	95.506	ENSOPRG00000015464	SNRNP200	100	95.506	Ochotona_princeps
ENSPTIG00000006380	SNRNP200	100	99.110	ENSODEG00000008366	SNRNP200	100	99.110	Octodon_degus
ENSPTIG00000006380	SNRNP200	99	90.230	ENSONIG00000010714	snrnp200	99	90.122	Oreochromis_niloticus
ENSPTIG00000006380	SNRNP200	100	99.298	ENSOCUG00000009864	SNRNP200	100	99.298	Oryctolagus_cuniculus
ENSPTIG00000006380	SNRNP200	100	89.888	ENSORLG00000012286	snrnp200	100	89.888	Oryzias_latipes
ENSPTIG00000006380	SNRNP200	100	89.934	ENSORLG00020004648	snrnp200	100	89.934	Oryzias_latipes_hni
ENSPTIG00000006380	SNRNP200	100	89.888	ENSORLG00015019114	snrnp200	100	89.888	Oryzias_latipes_hsok
ENSPTIG00000006380	SNRNP200	99	90.136	ENSOMEG00000011834	snrnp200	99	90.028	Oryzias_melastigma
ENSPTIG00000006380	SNRNP200	100	99.438	ENSOGAG00000006879	SNRNP200	100	99.438	Otolemur_garnettii
ENSPTIG00000006380	SNRNP200	100	98.081	ENSOARG00000013949	SNRNP200	100	98.081	Ovis_aries
ENSPTIG00000006380	SNRNP200	100	99.438	ENSPPAG00000041559	SNRNP200	100	99.438	Pan_paniscus
ENSPTIG00000006380	SNRNP200	100	99.532	ENSPPRG00000004435	SNRNP200	100	99.532	Panthera_pardus
ENSPTIG00000006380	SNRNP200	100	99.438	ENSPTRG00000012230	SNRNP200	100	99.438	Pan_troglodytes
ENSPTIG00000006380	SNRNP200	100	99.391	ENSPANG00000006017	SNRNP200	100	99.391	Papio_anubis
ENSPTIG00000006380	SNRNP200	100	90.777	ENSPKIG00000014762	snrnp200	99	90.777	Paramormyrops_kingsleyae
ENSPTIG00000006380	SNRNP200	100	96.397	ENSPSIG00000008580	SNRNP200	100	96.397	Pelodiscus_sinensis
ENSPTIG00000006380	SNRNP200	100	98.596	ENSPCIG00000023050	SNRNP200	100	98.596	Phascolarctos_cinereus
ENSPTIG00000006380	SNRNP200	100	90.033	ENSPFOG00000015110	snrnp200	99	90.033	Poecilia_formosa
ENSPTIG00000006380	SNRNP200	97	89.780	ENSPLAG00000006711	snrnp200	99	89.780	Poecilia_latipinna
ENSPTIG00000006380	SNRNP200	97	89.725	ENSPMEG00000021166	snrnp200	99	89.725	Poecilia_mexicana
ENSPTIG00000006380	SNRNP200	100	90.122	ENSPREG00000008875	snrnp200	99	90.122	Poecilia_reticulata
ENSPTIG00000006380	SNRNP200	100	99.438	ENSPPYG00000012068	SNRNP200	100	99.438	Pongo_abelii
ENSPTIG00000006380	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSPTIG00000006380	SNRNP200	100	99.438	ENSPCOG00000024608	SNRNP200	100	99.438	Propithecus_coquereli
ENSPTIG00000006380	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSPTIG00000006380	SNRNP200	99	85.667	ENSPNYG00000017476	snrnp200	99	85.574	Pundamilia_nyererei
ENSPTIG00000006380	SNRNP200	100	85.768	ENSPNAG00000010998	snrnp200	99	85.768	Pygocentrus_nattereri
ENSPTIG00000006380	SNRNP200	100	99.345	ENSRNOG00000012157	Snrnp200	100	99.345	Rattus_norvegicus
ENSPTIG00000006380	SNRNP200	100	99.438	ENSRBIG00000044690	-	100	99.438	Rhinopithecus_bieti
ENSPTIG00000006380	SNRNP200	100	99.438	ENSRROG00000037952	-	100	99.438	Rhinopithecus_roxellana
ENSPTIG00000006380	SNRNP200	100	99.391	ENSSBOG00000035471	SNRNP200	100	99.391	Saimiri_boliviensis_boliviensis
ENSPTIG00000006380	SNRNP200	97	98.500	ENSSHAG00000000758	SNRNP200	100	98.500	Sarcophilus_harrisii
ENSPTIG00000006380	SNRNP200	99	91.217	ENSSFOG00015018826	snrnp200	99	91.105	Scleropages_formosus
ENSPTIG00000006380	SNRNP200	99	90.136	ENSSMAG00000005463	snrnp200	99	90.028	Scophthalmus_maximus
ENSPTIG00000006380	SNRNP200	99	90.418	ENSSDUG00000021410	snrnp200	99	90.309	Seriola_dumerili
ENSPTIG00000006380	SNRNP200	99	90.371	ENSSLDG00000010884	snrnp200	99	90.262	Seriola_lalandi_dorsalis
ENSPTIG00000006380	SNRNP200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSPTIG00000006380	SNRNP200	100	97.191	ENSSPUG00000003726	-	100	97.191	Sphenodon_punctatus
ENSPTIG00000006380	SNRNP200	99	90.465	ENSSPAG00000001842	snrnp200	99	90.356	Stegastes_partitus
ENSPTIG00000006380	SNRNP200	100	99.345	ENSSSCG00000008127	SNRNP200	100	99.345	Sus_scrofa
ENSPTIG00000006380	SNRNP200	99	87.546	ENSTGUG00000014475	-	100	87.546	Taeniopygia_guttata
ENSPTIG00000006380	SNRNP200	99	90.089	ENSTRUG00000001307	snrnp200	99	89.981	Takifugu_rubripes
ENSPTIG00000006380	SNRNP200	100	85.992	ENSTNIG00000004320	snrnp200	100	79.305	Tetraodon_nigroviridis
ENSPTIG00000006380	SNRNP200	84	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSPTIG00000006380	SNRNP200	100	99.157	ENSTTRG00000004983	SNRNP200	100	99.157	Tursiops_truncatus
ENSPTIG00000006380	SNRNP200	75	93.023	ENSUAMG00000008395	-	95	93.023	Ursus_americanus
ENSPTIG00000006380	SNRNP200	100	99.532	ENSUMAG00000012385	SNRNP200	100	99.532	Ursus_maritimus
ENSPTIG00000006380	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSPTIG00000006380	SNRNP200	100	99.299	ENSVVUG00000026247	SNRNP200	100	99.299	Vulpes_vulpes
ENSPTIG00000006380	SNRNP200	100	93.969	ENSXETG00000001243	snrnp200	100	93.969	Xenopus_tropicalis
ENSPTIG00000006380	SNRNP200	97	90.043	ENSXMAG00000002058	snrnp200	98	90.043	Xiphophorus_maculatus