EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000006828 (Gene tree)
Gene ID: 102967838
Gene Symbol: RPUSD3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 11211 bases
Position: chrKE721644.1:3100089-3111299
Accession: 102967838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000004288	PseudoU_synth_2	PF00849.22	1.8e-20	1	1
ENSPTIP00000004297	PseudoU_synth_2	PF00849.22	2.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000008028	RPUSD3-201	5673	XM_007075482	ENSPTIP00000004288	344 (aa)	XP_007075544	-
ENSPTIT00000008037	RPUSD3-202	1269	XM_007075483	ENSPTIP00000004297	337 (aa)	XP_007075545	UPI00042BC911

Gene Model

Click here to download ENSPTIG00000006828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000006828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000006828	RPUSD3	82	30.068	ENSPTIG00000012059	RPUSD4	79	30.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000006828	RPUSD3	100	82.267	ENSG00000156990	RPUSD3	100	81.899	Homo_sapiens
ENSPTIG00000006828	RPUSD3	100	88.663	ENSAMEG00000016227	RPUSD3	98	88.663	Ailuropoda_melanoleuca
ENSPTIG00000006828	RPUSD3	95	49.851	ENSACAG00000009836	RPUSD3	92	49.851	Anolis_carolinensis
ENSPTIG00000006828	RPUSD3	55	82.011	ENSANAG00000038118	-	90	82.011	Aotus_nancymaae
ENSPTIG00000006828	RPUSD3	77	62.143	ENSANAG00000007127	-	98	62.143	Aotus_nancymaae
ENSPTIG00000006828	RPUSD3	58	83.333	ENSANAG00000019945	-	79	83.333	Aotus_nancymaae
ENSPTIG00000006828	RPUSD3	100	81.977	ENSBTAG00000007968	RPUSD3	100	81.977	Bos_taurus
ENSPTIG00000006828	RPUSD3	100	89.826	ENSCAFG00000029733	RPUSD3	98	89.826	Canis_familiaris
ENSPTIG00000006828	RPUSD3	100	89.826	ENSCAFG00020008582	RPUSD3	98	89.826	Canis_lupus_dingo
ENSPTIG00000006828	RPUSD3	100	81.395	ENSCHIG00000026027	RPUSD3	100	81.395	Capra_hircus
ENSPTIG00000006828	RPUSD3	99	77.515	ENSTSYG00000009994	RPUSD3	100	77.515	Carlito_syrichta
ENSPTIG00000006828	RPUSD3	76	80.989	ENSCAPG00000017559	RPUSD3	99	80.989	Cavia_aperea
ENSPTIG00000006828	RPUSD3	97	69.461	ENSCPOG00000037956	RPUSD3	87	69.461	Cavia_porcellus
ENSPTIG00000006828	RPUSD3	100	79.942	ENSCCAG00000029530	RPUSD3	100	79.228	Cebus_capucinus
ENSPTIG00000006828	RPUSD3	100	81.395	ENSCATG00000036939	RPUSD3	100	81.009	Cercocebus_atys
ENSPTIG00000006828	RPUSD3	100	81.977	ENSCSAG00000010506	RPUSD3	98	81.977	Chlorocebus_sabaeus
ENSPTIG00000006828	RPUSD3	51	86.607	ENSCHOG00000010151	-	67	86.607	Choloepus_hoffmanni
ENSPTIG00000006828	RPUSD3	61	58.095	ENSCPBG00000008825	RPUSD3	95	53.696	Chrysemys_picta_bellii
ENSPTIG00000006828	RPUSD3	100	80.814	ENSCANG00000040711	RPUSD3	100	80.119	Colobus_angolensis_palliatus
ENSPTIG00000006828	RPUSD3	97	74.184	ENSCGRG00001004923	Rpusd3	93	74.184	Cricetulus_griseus_chok1gshd
ENSPTIG00000006828	RPUSD3	97	74.184	ENSCGRG00000018315	Rpusd3	99	73.529	Cricetulus_griseus_crigri
ENSPTIG00000006828	RPUSD3	99	76.968	ENSDNOG00000039160	RPUSD3	91	76.968	Dasypus_novemcinctus
ENSPTIG00000006828	RPUSD3	97	63.473	ENSDORG00000026827	Rpusd3	92	77.612	Dipodomys_ordii
ENSPTIG00000006828	RPUSD3	100	75.000	ENSETEG00000006538	RPUSD3	97	75.000	Echinops_telfairi
ENSPTIG00000006828	RPUSD3	73	34.118	ENSEBUG00000015605	RPUSD3	67	37.864	Eptatretus_burgeri
ENSPTIG00000006828	RPUSD3	100	84.012	ENSEASG00005014160	RPUSD3	96	84.012	Equus_asinus_asinus
ENSPTIG00000006828	RPUSD3	100	84.302	ENSECAG00000019988	RPUSD3	96	84.302	Equus_caballus
ENSPTIG00000006828	RPUSD3	99	59.885	ENSEEUG00000007353	RPUSD3	100	59.664	Erinaceus_europaeus
ENSPTIG00000006828	RPUSD3	100	97.674	ENSFCAG00000014199	RPUSD3	100	97.626	Felis_catus
ENSPTIG00000006828	RPUSD3	79	49.451	ENSFALG00000012968	RPUSD3	99	49.084	Ficedula_albicollis
ENSPTIG00000006828	RPUSD3	77	81.132	ENSFDAG00000008350	RPUSD3	82	81.132	Fukomys_damarensis
ENSPTIG00000006828	RPUSD3	63	60.185	ENSGAGG00000007493	RPUSD3	82	55.513	Gopherus_agassizii
ENSPTIG00000006828	RPUSD3	99	83.186	ENSGGOG00000013120	RPUSD3	100	81.602	Gorilla_gorilla
ENSPTIG00000006828	RPUSD3	93	74.295	ENSHGLG00000011722	RPUSD3	80	74.295	Heterocephalus_glaber_female
ENSPTIG00000006828	RPUSD3	93	74.295	ENSHGLG00100016038	RPUSD3	80	74.295	Heterocephalus_glaber_male
ENSPTIG00000006828	RPUSD3	100	77.326	ENSSTOG00000002125	RPUSD3	98	77.326	Ictidomys_tridecemlineatus
ENSPTIG00000006828	RPUSD3	98	71.471	ENSJJAG00000012679	Rpusd3	99	71.471	Jaculus_jaculus
ENSPTIG00000006828	RPUSD3	100	80.233	ENSLAFG00000017501	RPUSD3	100	80.233	Loxodonta_africana
ENSPTIG00000006828	RPUSD3	100	81.105	ENSMFAG00000032407	RPUSD3	100	80.712	Macaca_fascicularis
ENSPTIG00000006828	RPUSD3	100	81.009	ENSMMUG00000010628	RPUSD3	97	84.839	Macaca_mulatta
ENSPTIG00000006828	RPUSD3	100	80.814	ENSMNEG00000040308	RPUSD3	100	80.415	Macaca_nemestrina
ENSPTIG00000006828	RPUSD3	100	81.395	ENSMLEG00000033940	RPUSD3	100	81.009	Mandrillus_leucophaeus
ENSPTIG00000006828	RPUSD3	98	74.706	ENSMAUG00000015473	Rpusd3	99	74.706	Mesocricetus_auratus
ENSPTIG00000006828	RPUSD3	100	78.613	ENSMICG00000002315	RPUSD3	100	78.613	Microcebus_murinus
ENSPTIG00000006828	RPUSD3	100	71.512	ENSMOCG00000022613	Rpusd3	100	71.512	Microtus_ochrogaster
ENSPTIG00000006828	RPUSD3	99	57.018	ENSMODG00000005210	RPUSD3	89	57.185	Monodelphis_domestica
ENSPTIG00000006828	RPUSD3	100	72.093	MGP_CAROLIEiJ_G0028725	Rpusd3	100	72.093	Mus_caroli
ENSPTIG00000006828	RPUSD3	100	72.674	ENSMUSG00000051169	Rpusd3	100	72.674	Mus_musculus
ENSPTIG00000006828	RPUSD3	100	72.674	MGP_PahariEiJ_G0022476	Rpusd3	100	72.674	Mus_pahari
ENSPTIG00000006828	RPUSD3	100	72.093	MGP_SPRETEiJ_G0029753	Rpusd3	100	72.093	Mus_spretus
ENSPTIG00000006828	RPUSD3	100	88.663	ENSMPUG00000017132	RPUSD3	98	88.663	Mustela_putorius_furo
ENSPTIG00000006828	RPUSD3	100	85.174	ENSMLUG00000006135	RPUSD3	99	85.174	Myotis_lucifugus
ENSPTIG00000006828	RPUSD3	97	73.273	ENSNGAG00000023704	Rpusd3	99	72.141	Nannospalax_galili
ENSPTIG00000006828	RPUSD3	100	67.151	ENSNLEG00000004214	RPUSD3	94	84.500	Nomascus_leucogenys
ENSPTIG00000006828	RPUSD3	76	66.412	ENSMEUG00000013098	-	100	63.359	Notamacropus_eugenii
ENSPTIG00000006828	RPUSD3	100	63.953	ENSOPRG00000002300	RPUSD3	98	63.953	Ochotona_princeps
ENSPTIG00000006828	RPUSD3	77	80.303	ENSODEG00000018137	RPUSD3	91	80.303	Octodon_degus
ENSPTIG00000006828	RPUSD3	83	51.399	ENSOANG00000012081	-	99	50.699	Ornithorhynchus_anatinus
ENSPTIG00000006828	RPUSD3	100	68.946	ENSOCUG00000027885	RPUSD3	100	68.946	Oryctolagus_cuniculus
ENSPTIG00000006828	RPUSD3	91	83.121	ENSOGAG00000012592	RPUSD3	100	83.121	Otolemur_garnettii
ENSPTIG00000006828	RPUSD3	100	83.140	ENSOARG00000005928	RPUSD3	98	83.140	Ovis_aries
ENSPTIG00000006828	RPUSD3	98	83.631	ENSPPAG00000038083	RPUSD3	99	82.335	Pan_paniscus
ENSPTIG00000006828	RPUSD3	100	98.837	ENSPPRG00000024433	RPUSD3	100	98.813	Panthera_pardus
ENSPTIG00000006828	RPUSD3	98	83.333	ENSPTRG00000051760	RPUSD3	99	82.036	Pan_troglodytes
ENSPTIG00000006828	RPUSD3	100	81.977	ENSPANG00000023885	RPUSD3	100	81.602	Papio_anubis
ENSPTIG00000006828	RPUSD3	100	72.965	ENSPEMG00000017245	Rpusd3	100	72.965	Peromyscus_maniculatus_bairdii
ENSPTIG00000006828	RPUSD3	84	66.090	ENSPCIG00000021901	RPUSD3	84	66.319	Phascolarctos_cinereus
ENSPTIG00000006828	RPUSD3	99	83.284	ENSPPYG00000013676	RPUSD3	97	83.284	Pongo_abelii
ENSPTIG00000006828	RPUSD3	82	62.278	ENSPCAG00000013731	-	100	62.284	Procavia_capensis
ENSPTIG00000006828	RPUSD3	100	83.140	ENSPCOG00000018314	RPUSD3	100	82.196	Propithecus_coquereli
ENSPTIG00000006828	RPUSD3	100	80.814	ENSPVAG00000011107	RPUSD3	98	80.814	Pteropus_vampyrus
ENSPTIG00000006828	RPUSD3	98	70.821	ENSRNOG00000009084	Rpusd3	100	70.821	Rattus_norvegicus
ENSPTIG00000006828	RPUSD3	98	82.789	ENSRBIG00000041230	RPUSD3	99	81.194	Rhinopithecus_bieti
ENSPTIG00000006828	RPUSD3	98	82.789	ENSRROG00000043328	RPUSD3	96	82.789	Rhinopithecus_roxellana
ENSPTIG00000006828	RPUSD3	100	79.822	ENSSBOG00000036106	RPUSD3	100	79.822	Saimiri_boliviensis_boliviensis
ENSPTIG00000006828	RPUSD3	87	60.535	ENSSHAG00000015536	RPUSD3	96	60.535	Sarcophilus_harrisii
ENSPTIG00000006828	RPUSD3	100	81.686	ENSSSCG00000011555	RPUSD3	98	81.686	Sus_scrofa
ENSPTIG00000006828	RPUSD3	63	51.152	ENSTGUG00000008744	RPUSD3	93	51.152	Taeniopygia_guttata
ENSPTIG00000006828	RPUSD3	82	78.648	ENSTBEG00000000176	RPUSD3	97	78.648	Tupaia_belangeri
ENSPTIG00000006828	RPUSD3	100	82.267	ENSTTRG00000007544	RPUSD3	98	82.267	Tursiops_truncatus
ENSPTIG00000006828	RPUSD3	91	92.675	ENSUAMG00000011354	RPUSD3	98	92.675	Ursus_americanus
ENSPTIG00000006828	RPUSD3	100	90.407	ENSUMAG00000018830	RPUSD3	98	90.407	Ursus_maritimus
ENSPTIG00000006828	RPUSD3	100	90.407	ENSVVUG00000023735	RPUSD3	100	90.407	Vulpes_vulpes
ENSPTIG00000006828	RPUSD3	81	49.645	ENSXETG00000023546	rpusd3	99	49.645	Xenopus_tropicalis