EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000006909 (Gene tree)
Gene ID: 102969790
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 28414 bases
Position: chrKE721980.1:4733652-4762065
Accession: 102969790
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000004430	CPSF_A	PF03178.15	4.2e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000008175	DDB1-201	3423	XM_007092120	ENSPTIP00000004430	1140 (aa)	XP_007092182	-

Gene Model

Click here to download ENSPTIG00000006909's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03420	Nucleotide excision repair	KEGG
ptg04120	Ubiquitin mediated proteolysis	KEGG
ptg05161	Hepatitis B	KEGG
ptg05170	Human immunodeficiency virus 1 infection	KEGG
ptg05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000006909's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000006909	DDB1	98	99.911	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSPTIG00000006909	DDB1	96	91.484	ENSAPOG00000005036	ddb1	98	91.554	Acanthochromis_polyacanthus
ENSPTIG00000006909	DDB1	98	100.000	ENSAMEG00000016518	DDB1	98	100.000	Ailuropoda_melanoleuca
ENSPTIG00000006909	DDB1	84	91.867	ENSACIG00000020624	ddb1	98	91.867	Amphilophus_citrinellus
ENSPTIG00000006909	DDB1	98	91.153	ENSAOCG00000003066	ddb1	98	91.153	Amphiprion_ocellaris
ENSPTIG00000006909	DDB1	98	91.242	ENSAPEG00000000092	ddb1	98	91.242	Amphiprion_percula
ENSPTIG00000006909	DDB1	92	91.746	ENSATEG00000020571	ddb1	95	91.746	Anabas_testudineus
ENSPTIG00000006909	DDB1	98	96.702	ENSAPLG00000007174	DDB1	99	96.702	Anas_platyrhynchos
ENSPTIG00000006909	DDB1	98	97.140	ENSACAG00000017758	DDB1	98	97.140	Anolis_carolinensis
ENSPTIG00000006909	DDB1	98	99.911	ENSANAG00000021878	DDB1	98	99.911	Aotus_nancymaae
ENSPTIG00000006909	DDB1	98	91.510	ENSACLG00000012401	ddb1	98	91.510	Astatotilapia_calliptera
ENSPTIG00000006909	DDB1	98	99.821	ENSBTAG00000021569	DDB1	91	99.821	Bos_taurus
ENSPTIG00000006909	DDB1	98	37.282	WBGene00010890	ddb-1	98	37.195	Caenorhabditis_elegans
ENSPTIG00000006909	DDB1	98	99.911	ENSCJAG00000019319	DDB1	98	99.911	Callithrix_jacchus
ENSPTIG00000006909	DDB1	98	100.000	ENSCAFG00000016264	DDB1	98	100.000	Canis_familiaris
ENSPTIG00000006909	DDB1	92	99.715	ENSCAFG00020012722	DDB1	97	99.715	Canis_lupus_dingo
ENSPTIG00000006909	DDB1	98	99.821	ENSCHIG00000014969	DDB1	98	99.821	Capra_hircus
ENSPTIG00000006909	DDB1	98	99.285	ENSTSYG00000008027	DDB1	98	99.285	Carlito_syrichta
ENSPTIG00000006909	DDB1	98	99.196	ENSCAPG00000010786	DDB1	100	99.196	Cavia_aperea
ENSPTIG00000006909	DDB1	98	99.196	ENSCPOG00000009956	DDB1	98	99.196	Cavia_porcellus
ENSPTIG00000006909	DDB1	98	99.911	ENSCCAG00000035883	DDB1	98	99.911	Cebus_capucinus
ENSPTIG00000006909	DDB1	98	97.347	ENSCATG00000044495	DDB1	98	97.347	Cercocebus_atys
ENSPTIG00000006909	DDB1	98	99.285	ENSCLAG00000004126	DDB1	98	99.285	Chinchilla_lanigera
ENSPTIG00000006909	DDB1	98	99.911	ENSCSAG00000006392	DDB1	98	99.911	Chlorocebus_sabaeus
ENSPTIG00000006909	DDB1	86	92.803	ENSCHOG00000011377	DDB1	88	92.803	Choloepus_hoffmanni
ENSPTIG00000006909	DDB1	98	97.676	ENSCPBG00000017728	DDB1	98	97.676	Chrysemys_picta_bellii
ENSPTIG00000006909	DDB1	98	61.804	ENSCING00000007437	-	98	61.715	Ciona_intestinalis
ENSPTIG00000006909	DDB1	94	60.276	ENSCSAVG00000004783	-	100	60.276	Ciona_savignyi
ENSPTIG00000006909	DDB1	98	99.911	ENSCANG00000019948	DDB1	98	99.911	Colobus_angolensis_palliatus
ENSPTIG00000006909	DDB1	98	99.911	ENSCGRG00001016599	Ddb1	98	99.911	Cricetulus_griseus_chok1gshd
ENSPTIG00000006909	DDB1	98	99.911	ENSCGRG00000013427	Ddb1	98	99.911	Cricetulus_griseus_crigri
ENSPTIG00000006909	DDB1	91	91.250	ENSCSEG00000012499	ddb1	98	89.659	Cynoglossus_semilaevis
ENSPTIG00000006909	DDB1	92	91.445	ENSCVAG00000019531	ddb1	97	91.445	Cyprinodon_variegatus
ENSPTIG00000006909	DDB1	98	88.314	ENSDARG00000074431	ddb1	98	88.434	Danio_rerio
ENSPTIG00000006909	DDB1	92	99.336	ENSDNOG00000014884	DDB1	95	99.336	Dasypus_novemcinctus
ENSPTIG00000006909	DDB1	82	100.000	ENSDORG00000000127	Ddb1	98	100.000	Dipodomys_ordii
ENSPTIG00000006909	DDB1	98	60.765	FBgn0260962	pic	98	60.552	Drosophila_melanogaster
ENSPTIG00000006909	DDB1	69	100.000	ENSETEG00000001053	-	69	100.000	Echinops_telfairi
ENSPTIG00000006909	DDB1	76	85.023	ENSEBUG00000014593	ddb1	95	85.023	Eptatretus_burgeri
ENSPTIG00000006909	DDB1	98	99.821	ENSEASG00005008184	DDB1	98	99.821	Equus_asinus_asinus
ENSPTIG00000006909	DDB1	98	99.732	ENSECAG00000012136	DDB1	98	99.732	Equus_caballus
ENSPTIG00000006909	DDB1	79	97.643	ENSEEUG00000003194	DDB1	79	97.643	Erinaceus_europaeus
ENSPTIG00000006909	DDB1	98	91.242	ENSELUG00000023868	ddb1	98	91.242	Esox_lucius
ENSPTIG00000006909	DDB1	98	100.000	ENSFCAG00000029716	DDB1	98	100.000	Felis_catus
ENSPTIG00000006909	DDB1	98	97.237	ENSFALG00000011981	DDB1	98	97.237	Ficedula_albicollis
ENSPTIG00000006909	DDB1	98	99.196	ENSFDAG00000005128	DDB1	98	99.196	Fukomys_damarensis
ENSPTIG00000006909	DDB1	89	90.588	ENSFHEG00000022133	ddb1	96	90.676	Fundulus_heteroclitus
ENSPTIG00000006909	DDB1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSPTIG00000006909	DDB1	98	97.051	ENSGALG00000042333	DDB1	98	97.051	Gallus_gallus
ENSPTIG00000006909	DDB1	92	91.255	ENSGAFG00000013142	ddb1	97	91.255	Gambusia_affinis
ENSPTIG00000006909	DDB1	94	90.561	ENSGACG00000017182	ddb1	98	90.561	Gasterosteus_aculeatus
ENSPTIG00000006909	DDB1	95	97.786	ENSGAGG00000014124	DDB1	100	97.786	Gopherus_agassizii
ENSPTIG00000006909	DDB1	98	99.911	ENSGGOG00000004052	DDB1	98	99.911	Gorilla_gorilla
ENSPTIG00000006909	DDB1	98	91.510	ENSHBUG00000008873	ddb1	100	91.236	Haplochromis_burtoni
ENSPTIG00000006909	DDB1	98	99.106	ENSHGLG00000018430	DDB1	98	99.106	Heterocephalus_glaber_female
ENSPTIG00000006909	DDB1	98	98.034	ENSHGLG00100014475	DDB1	98	98.034	Heterocephalus_glaber_male
ENSPTIG00000006909	DDB1	93	90.995	ENSHCOG00000018670	ddb1	97	90.995	Hippocampus_comes
ENSPTIG00000006909	DDB1	98	90.527	ENSIPUG00000005612	DDB1	98	90.527	Ictalurus_punctatus
ENSPTIG00000006909	DDB1	98	99.911	ENSSTOG00000007552	DDB1	98	99.911	Ictidomys_tridecemlineatus
ENSPTIG00000006909	DDB1	98	99.732	ENSJJAG00000017769	Ddb1	98	99.732	Jaculus_jaculus
ENSPTIG00000006909	DDB1	92	91.350	ENSKMAG00000002315	ddb1	98	91.350	Kryptolebias_marmoratus
ENSPTIG00000006909	DDB1	84	91.762	ENSLBEG00000017065	ddb1	99	91.762	Labrus_bergylta
ENSPTIG00000006909	DDB1	98	93.756	ENSLACG00000017611	DDB1	98	93.756	Latimeria_chalumnae
ENSPTIG00000006909	DDB1	90	82.378	ENSLOCG00000000012	ddb1	98	82.378	Lepisosteus_oculatus
ENSPTIG00000006909	DDB1	98	99.732	ENSLAFG00000011513	DDB1	98	99.732	Loxodonta_africana
ENSPTIG00000006909	DDB1	98	99.911	ENSMFAG00000042035	DDB1	98	99.911	Macaca_fascicularis
ENSPTIG00000006909	DDB1	97	99.910	ENSMMUG00000002691	DDB1	98	99.910	Macaca_mulatta
ENSPTIG00000006909	DDB1	98	99.911	ENSMNEG00000031559	DDB1	98	99.911	Macaca_nemestrina
ENSPTIG00000006909	DDB1	98	99.911	ENSMLEG00000044136	DDB1	98	99.911	Mandrillus_leucophaeus
ENSPTIG00000006909	DDB1	98	91.510	ENSMAMG00000014372	ddb1	98	91.510	Mastacembelus_armatus
ENSPTIG00000006909	DDB1	98	91.421	ENSMZEG00005013835	ddb1	98	91.421	Maylandia_zebra
ENSPTIG00000006909	DDB1	94	96.462	ENSMGAG00000004990	DDB1	100	96.462	Meleagris_gallopavo
ENSPTIG00000006909	DDB1	98	99.911	ENSMAUG00000012926	Ddb1	98	99.911	Mesocricetus_auratus
ENSPTIG00000006909	DDB1	98	99.911	ENSMICG00000013703	DDB1	98	99.911	Microcebus_murinus
ENSPTIG00000006909	DDB1	98	99.643	ENSMOCG00000020499	Ddb1	98	99.643	Microtus_ochrogaster
ENSPTIG00000006909	DDB1	84	91.867	ENSMMOG00000001758	ddb1	98	91.867	Mola_mola
ENSPTIG00000006909	DDB1	98	89.075	ENSMODG00000020353	DDB1	98	89.075	Monodelphis_domestica
ENSPTIG00000006909	DDB1	98	91.510	ENSMALG00000014071	ddb1	98	91.510	Monopterus_albus
ENSPTIG00000006909	DDB1	98	99.821	MGP_CAROLIEiJ_G0022695	Ddb1	98	99.821	Mus_caroli
ENSPTIG00000006909	DDB1	98	99.732	ENSMUSG00000024740	Ddb1	98	99.732	Mus_musculus
ENSPTIG00000006909	DDB1	98	99.821	MGP_PahariEiJ_G0014189	Ddb1	98	99.821	Mus_pahari
ENSPTIG00000006909	DDB1	98	99.821	MGP_SPRETEiJ_G0023609	Ddb1	98	99.821	Mus_spretus
ENSPTIG00000006909	DDB1	98	96.604	ENSMPUG00000014200	DDB1	98	96.604	Mustela_putorius_furo
ENSPTIG00000006909	DDB1	98	99.374	ENSMLUG00000013232	DDB1	98	99.374	Myotis_lucifugus
ENSPTIG00000006909	DDB1	98	99.464	ENSNGAG00000009384	Ddb1	98	99.464	Nannospalax_galili
ENSPTIG00000006909	DDB1	98	91.600	ENSNBRG00000019581	ddb1	98	91.600	Neolamprologus_brichardi
ENSPTIG00000006909	DDB1	98	96.729	ENSNLEG00000002022	DDB1	98	96.729	Nomascus_leucogenys
ENSPTIG00000006909	DDB1	91	99.648	ENSMEUG00000001099	DDB1	93	99.648	Notamacropus_eugenii
ENSPTIG00000006909	DDB1	90	91.077	ENSOPRG00000008254	DDB1	90	91.077	Ochotona_princeps
ENSPTIG00000006909	DDB1	98	99.106	ENSODEG00000002419	DDB1	98	99.106	Octodon_degus
ENSPTIG00000006909	DDB1	98	91.510	ENSONIG00000005804	ddb1	98	91.510	Oreochromis_niloticus
ENSPTIG00000006909	DDB1	91	98.159	ENSOANG00000004897	DDB1	100	98.159	Ornithorhynchus_anatinus
ENSPTIG00000006909	DDB1	98	99.911	ENSOCUG00000001667	DDB1	98	99.911	Oryctolagus_cuniculus
ENSPTIG00000006909	DDB1	94	89.907	ENSORLG00000001399	ddb1	96	91.176	Oryzias_latipes
ENSPTIG00000006909	DDB1	94	89.813	ENSORLG00020001277	ddb1	95	89.813	Oryzias_latipes_hni
ENSPTIG00000006909	DDB1	92	90.987	ENSORLG00015002080	ddb1	97	90.987	Oryzias_latipes_hsok
ENSPTIG00000006909	DDB1	94	89.777	ENSOMEG00000006181	ddb1	97	89.777	Oryzias_melastigma
ENSPTIG00000006909	DDB1	98	99.732	ENSOGAG00000016103	DDB1	98	99.732	Otolemur_garnettii
ENSPTIG00000006909	DDB1	97	99.819	ENSOARG00000011716	DDB1	96	99.819	Ovis_aries
ENSPTIG00000006909	DDB1	98	99.911	ENSPPAG00000035343	DDB1	98	99.911	Pan_paniscus
ENSPTIG00000006909	DDB1	98	100.000	ENSPPRG00000013300	DDB1	98	100.000	Panthera_pardus
ENSPTIG00000006909	DDB1	98	99.911	ENSPTRG00000003737	DDB1	98	99.911	Pan_troglodytes
ENSPTIG00000006909	DDB1	98	99.911	ENSPANG00000000242	DDB1	98	99.911	Papio_anubis
ENSPTIG00000006909	DDB1	92	91.350	ENSPKIG00000019213	ddb1	92	91.350	Paramormyrops_kingsleyae
ENSPTIG00000006909	DDB1	98	97.235	ENSPSIG00000013275	DDB1	99	97.235	Pelodiscus_sinensis
ENSPTIG00000006909	DDB1	84	91.554	ENSPMGG00000021179	ddb1	98	91.554	Periophthalmus_magnuspinnatus
ENSPTIG00000006909	DDB1	98	99.911	ENSPEMG00000012241	Ddb1	98	99.911	Peromyscus_maniculatus_bairdii
ENSPTIG00000006909	DDB1	89	86.824	ENSPMAG00000008479	ddb1	99	86.824	Petromyzon_marinus
ENSPTIG00000006909	DDB1	98	99.017	ENSPCIG00000002643	DDB1	98	99.017	Phascolarctos_cinereus
ENSPTIG00000006909	DDB1	98	90.893	ENSPFOG00000002768	ddb1	98	90.893	Poecilia_formosa
ENSPTIG00000006909	DDB1	98	90.706	ENSPLAG00000017227	ddb1	98	90.706	Poecilia_latipinna
ENSPTIG00000006909	DDB1	98	90.706	ENSPMEG00000011398	ddb1	98	90.706	Poecilia_mexicana
ENSPTIG00000006909	DDB1	92	91.366	ENSPREG00000004440	ddb1	96	91.366	Poecilia_reticulata
ENSPTIG00000006909	DDB1	98	94.844	ENSPPYG00000003193	DDB1	98	94.844	Pongo_abelii
ENSPTIG00000006909	DDB1	83	99.552	ENSPCAG00000011040	DDB1	83	99.552	Procavia_capensis
ENSPTIG00000006909	DDB1	98	98.305	ENSPCOG00000015176	DDB1	98	98.305	Propithecus_coquereli
ENSPTIG00000006909	DDB1	98	99.821	ENSPVAG00000003847	DDB1	98	99.821	Pteropus_vampyrus
ENSPTIG00000006909	DDB1	92	91.350	ENSPNAG00000006635	ddb1	95	91.350	Pygocentrus_nattereri
ENSPTIG00000006909	DDB1	98	99.821	ENSRNOG00000020715	Ddb1	98	99.821	Rattus_norvegicus
ENSPTIG00000006909	DDB1	98	99.911	ENSRBIG00000033611	DDB1	98	99.911	Rhinopithecus_bieti
ENSPTIG00000006909	DDB1	98	99.911	ENSRROG00000041407	DDB1	98	99.911	Rhinopithecus_roxellana
ENSPTIG00000006909	DDB1	98	99.821	ENSSBOG00000019775	DDB1	98	99.821	Saimiri_boliviensis_boliviensis
ENSPTIG00000006909	DDB1	94	97.009	ENSSHAG00000011600	DDB1	100	97.009	Sarcophilus_harrisii
ENSPTIG00000006909	DDB1	93	91.469	ENSSFOG00015011151	ddb1	95	91.469	Scleropages_formosus
ENSPTIG00000006909	DDB1	98	90.974	ENSSMAG00000009495	ddb1	98	90.974	Scophthalmus_maximus
ENSPTIG00000006909	DDB1	98	91.421	ENSSDUG00000004642	ddb1	98	91.421	Seriola_dumerili
ENSPTIG00000006909	DDB1	98	91.421	ENSSLDG00000015804	ddb1	98	91.421	Seriola_lalandi_dorsalis
ENSPTIG00000006909	DDB1	64	100.000	ENSSARG00000003290	-	66	100.000	Sorex_araneus
ENSPTIG00000006909	DDB1	98	97.855	ENSSPUG00000019338	DDB1	98	97.855	Sphenodon_punctatus
ENSPTIG00000006909	DDB1	92	91.651	ENSSPAG00000009888	ddb1	97	91.651	Stegastes_partitus
ENSPTIG00000006909	DDB1	98	98.928	ENSSSCG00000013094	DDB1	98	98.928	Sus_scrofa
ENSPTIG00000006909	DDB1	98	97.051	ENSTGUG00000006414	DDB1	98	97.051	Taeniopygia_guttata
ENSPTIG00000006909	DDB1	92	90.304	ENSTRUG00000016682	ddb1	97	90.304	Takifugu_rubripes
ENSPTIG00000006909	DDB1	88	85.030	ENSTNIG00000009565	ddb1	99	85.030	Tetraodon_nigroviridis
ENSPTIG00000006909	DDB1	92	94.909	ENSTTRG00000011055	DDB1	94	94.909	Tursiops_truncatus
ENSPTIG00000006909	DDB1	92	99.715	ENSUAMG00000017793	DDB1	92	99.715	Ursus_americanus
ENSPTIG00000006909	DDB1	92	99.715	ENSUMAG00000011788	DDB1	96	99.715	Ursus_maritimus
ENSPTIG00000006909	DDB1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
ENSPTIG00000006909	DDB1	98	99.911	ENSVVUG00000004987	DDB1	98	99.911	Vulpes_vulpes
ENSPTIG00000006909	DDB1	98	93.232	ENSXETG00000008820	ddb1	98	93.232	Xenopus_tropicalis
ENSPTIG00000006909	DDB1	84	91.345	ENSXCOG00000013956	ddb1	98	91.345	Xiphophorus_couchianus
ENSPTIG00000006909	DDB1	92	91.255	ENSXMAG00000000022	ddb1	97	91.255	Xiphophorus_maculatus