EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000006939 (Gene tree)
Gene ID: 102966460
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha%2C somatic form-like
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 11149 bases
Position: chrKE721781.1:1835263-1846411
Accession: 102966460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000004432	GTP_EFTU	PF00009.27	2e-54	1	1
ENSPTIP00000004432	GTP_EFTU_D2	PF03144.25	2.2e-13	1	1
ENSPTIP00000004432	GTP_EFTU_D3	PF03143.17	2.2e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000008178	-	1416	XM_007083696	ENSPTIP00000004432	461 (aa)	XP_007083758	UPI00042BCA9D

Gene Model

Click here to download ENSPTIG00000006939's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03013	RNA transport	KEGG
ptg05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000006939's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000006939	-	99	81.957	ENSPTIG00000011764	-	99	81.957
ENSPTIG00000006939	-	95	38.497	ENSPTIG00000015803	HBS1L	69	38.497
ENSPTIG00000006939	-	72	96.296	ENSPTIG00000019573	EEF1A2	88	96.296
ENSPTIG00000006939	-	99	85.870	ENSPTIG00000007871	EEF1A1	99	85.870
ENSPTIG00000006939	-	95	36.878	ENSPTIG00000020265	GSPT1	86	36.878
ENSPTIG00000006939	-	95	30.856	ENSPTIG00000009980	TUFM	90	30.856
ENSPTIG00000006939	-	99	85.652	ENSPTIG00000008154	-	99	85.652
ENSPTIG00000006939	-	95	35.973	ENSPTIG00000008104	GSPT2	68	35.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000006939	-	67	82.736	ENSAPOG00000004757	eef1a1l1	99	95.312	Acanthochromis_polyacanthus
ENSPTIG00000006939	-	100	78.308	ENSAMEG00000004317	-	100	78.308	Ailuropoda_melanoleuca
ENSPTIG00000006939	-	100	96.095	ENSAMEG00000009677	-	100	96.095	Ailuropoda_melanoleuca
ENSPTIG00000006939	-	100	96.312	ENSCAFG00000013249	-	100	96.312	Canis_familiaris
ENSPTIG00000006939	-	100	96.312	ENSCAFG00020020007	-	100	96.312	Canis_lupus_dingo
ENSPTIG00000006939	-	100	87.636	ENSCPBG00000000646	-	100	87.636	Chrysemys_picta_bellii
ENSPTIG00000006939	-	100	88.286	ENSCPBG00000000748	-	100	88.286	Chrysemys_picta_bellii
ENSPTIG00000006939	-	99	86.957	ENSDARG00000020850	eef1a1l1	99	86.957	Danio_rerio
ENSPTIG00000006939	-	98	87.665	ENSEASG00005012365	-	96	88.152	Equus_asinus_asinus
ENSPTIG00000006939	-	85	82.741	ENSEASG00005018013	-	99	82.741	Equus_asinus_asinus
ENSPTIG00000006939	-	100	85.249	ENSECAG00000022260	-	100	85.249	Equus_caballus
ENSPTIG00000006939	-	100	85.466	ENSELUG00000023536	eef1a1l1	100	85.466	Esox_lucius
ENSPTIG00000006939	-	100	86.985	ENSFCAG00000030530	-	100	86.985	Felis_catus
ENSPTIG00000006939	-	100	88.069	ENSGAGG00000000648	-	100	88.069	Gopherus_agassizii
ENSPTIG00000006939	-	100	88.286	ENSGAGG00000000642	-	100	88.286	Gopherus_agassizii
ENSPTIG00000006939	-	90	84.019	ENSLBEG00000002790	eef1a1l1	99	84.019	Labrus_bergylta
ENSPTIG00000006939	-	100	87.419	ENSLAFG00000025161	-	100	87.419	Loxodonta_africana
ENSPTIG00000006939	-	100	91.974	ENSLAFG00000028081	-	99	91.974	Loxodonta_africana
ENSPTIG00000006939	-	75	88.150	ENSOANG00000012066	-	100	88.150	Ornithorhynchus_anatinus
ENSPTIG00000006939	-	90	85.230	ENSOMEG00000006888	-	99	85.230	Oryzias_melastigma
ENSPTIG00000006939	-	100	86.985	ENSOARG00000002943	-	100	86.985	Ovis_aries
ENSPTIG00000006939	-	97	87.277	ENSPPRG00000005678	-	96	87.277	Panthera_pardus
ENSPTIG00000006939	-	100	97.831	ENSPPRG00000008525	-	100	97.831	Panthera_pardus
ENSPTIG00000006939	-	100	88.069	ENSPSIG00000008610	-	100	88.069	Pelodiscus_sinensis
ENSPTIG00000006939	-	66	95.370	ENSPVAG00000007682	-	65	95.370	Pteropus_vampyrus
ENSPTIG00000006939	-	100	80.477	ENSSMAG00000018455	-	99	80.477	Scophthalmus_maximus
ENSPTIG00000006939	-	100	87.636	ENSSPUG00000003655	-	100	87.636	Sphenodon_punctatus
ENSPTIG00000006939	-	98	88.938	ENSSSCG00000038035	-	100	88.720	Sus_scrofa
ENSPTIG00000006939	-	100	87.202	ENSSSCG00000034113	-	100	87.202	Sus_scrofa
ENSPTIG00000006939	-	51	77.872	ENSUAMG00000006085	-	98	77.872	Ursus_americanus
ENSPTIG00000006939	-	100	75.705	ENSUAMG00000007676	-	100	75.705	Ursus_americanus
ENSPTIG00000006939	-	100	94.360	ENSUAMG00000008928	-	100	94.360	Ursus_americanus
ENSPTIG00000006939	-	100	96.529	ENSUMAG00000013211	-	100	96.529	Ursus_maritimus
ENSPTIG00000006939	-	100	96.095	ENSVVUG00000026886	-	100	96.095	Vulpes_vulpes
ENSPTIG00000006939	-	100	85.033	ENSXETG00000022604	eef1a1o	100	85.033	Xenopus_tropicalis