EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000007745 (Gene tree)
Gene ID: 102972066
Gene Symbol: -
Alias: -
Full Name: survival of motor neuron 2%2C centromeric
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 41608 bases
Position: chrKE721728.1:17750197-17791804
Accession: 102972066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000005668	SMN	PF06003.12	4.3e-107	1	1
ENSPTIP00000005686	SMN	PF06003.12	4.5e-93	1	2
ENSPTIP00000005686	SMN	PF06003.12	4.5e-93	2	2
ENSPTIP00000005690	SMN	PF06003.12	2.6e-58	1	2
ENSPTIP00000005690	SMN	PF06003.12	2.6e-58	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000009462	-	1285	XM_007079862	ENSPTIP00000005668	291 (aa)	XP_007079924	UPI00042BD60D
ENSPTIT00000009480	-	780	-	ENSPTIP00000005686	259 (aa)	-	UPI00072E5A21
ENSPTIT00000009484	-	675	-	ENSPTIP00000005690	224 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000007745's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000007745's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000007745	-	97	90.747	ENSG00000205571	SMN2	99	89.384	Homo_sapiens
ENSPTIG00000007745	-	97	90.747	ENSG00000172062	SMN1	99	89.384	Homo_sapiens
ENSPTIG00000007745	-	93	51.264	ENSAPOG00000011324	smn1	94	50.730	Acanthochromis_polyacanthus
ENSPTIG00000007745	-	97	92.933	ENSAMEG00000003316	-	96	92.784	Ailuropoda_melanoleuca
ENSPTIG00000007745	-	89	50.936	ENSACIG00000019772	-	97	49.808	Amphilophus_citrinellus
ENSPTIG00000007745	-	93	51.986	ENSAOCG00000024444	smn1	94	52.158	Amphiprion_ocellaris
ENSPTIG00000007745	-	93	52.347	ENSAPEG00000016504	smn1	94	52.518	Amphiprion_percula
ENSPTIG00000007745	-	90	53.676	ENSATEG00000002182	smn1	79	54.982	Anabas_testudineus
ENSPTIG00000007745	-	69	57.635	ENSAPLG00000010912	-	97	57.500	Anas_platyrhynchos
ENSPTIG00000007745	-	92	71.875	ENSACAG00000010017	-	99	58.108	Anolis_carolinensis
ENSPTIG00000007745	-	99	85.714	ENSANAG00000032133	-	99	85.714	Aotus_nancymaae
ENSPTIG00000007745	-	93	52.688	ENSACLG00000007308	smn1	88	55.212	Astatotilapia_calliptera
ENSPTIG00000007745	-	55	57.042	ENSAMXG00000013884	smn1	97	47.887	Astyanax_mexicanus
ENSPTIG00000007745	-	97	85.866	ENSBTAG00000005743	SMN2	99	85.764	Bos_taurus
ENSPTIG00000007745	-	87	30.263	WBGene00004887	smn-1	94	30.317	Caenorhabditis_elegans
ENSPTIG00000007745	-	96	91.250	ENSCJAG00000016290	-	99	88.077	Callithrix_jacchus
ENSPTIG00000007745	-	100	91.753	ENSCAFG00000007812	SMN	100	91.753	Canis_familiaris
ENSPTIG00000007745	-	99	91.724	ENSCAFG00020019229	-	93	91.724	Canis_lupus_dingo
ENSPTIG00000007745	-	97	86.972	ENSCHIG00000015559	-	100	85.185	Capra_hircus
ENSPTIG00000007745	-	99	90.090	ENSTSYG00000012058	-	99	90.090	Carlito_syrichta
ENSPTIG00000007745	-	77	67.544	ENSCAPG00000011021	-	100	67.982	Cavia_aperea
ENSPTIG00000007745	-	99	81.293	ENSCPOG00000012328	-	100	80.268	Cavia_porcellus
ENSPTIG00000007745	-	100	81.017	ENSCPOG00000036973	-	100	80.339	Cavia_porcellus
ENSPTIG00000007745	-	96	90.000	ENSCCAG00000018127	-	99	87.556	Cebus_capucinus
ENSPTIG00000007745	-	97	89.680	ENSCATG00000037002	-	99	88.444	Cercocebus_atys
ENSPTIG00000007745	-	100	80.150	ENSCLAG00000000284	-	100	80.150	Chinchilla_lanigera
ENSPTIG00000007745	-	97	90.036	ENSCSAG00000015688	-	99	88.699	Chlorocebus_sabaeus
ENSPTIG00000007745	-	87	77.381	ENSCHOG00000007346	-	100	77.381	Choloepus_hoffmanni
ENSPTIG00000007745	-	99	63.051	ENSCPBG00000010968	-	99	63.469	Chrysemys_picta_bellii
ENSPTIG00000007745	-	99	79.310	ENSCANG00000033324	-	99	77.692	Colobus_angolensis_palliatus
ENSPTIG00000007745	-	97	89.680	ENSCANG00000038242	-	100	88.172	Colobus_angolensis_palliatus
ENSPTIG00000007745	-	100	83.162	ENSCGRG00001017959	-	100	83.162	Cricetulus_griseus_chok1gshd
ENSPTIG00000007745	-	100	64.948	ENSCGRG00001016998	-	100	65.292	Cricetulus_griseus_chok1gshd
ENSPTIG00000007745	-	100	83.162	ENSCGRG00000007698	Smn1	100	83.162	Cricetulus_griseus_crigri
ENSPTIG00000007745	-	79	62.857	ENSCSEG00000015227	smn1	97	48.754	Cynoglossus_semilaevis
ENSPTIG00000007745	-	92	51.799	ENSCVAG00000007498	smn1	94	51.087	Cyprinodon_variegatus
ENSPTIG00000007745	-	95	51.418	ENSDARG00000018494	smn1	96	52.364	Danio_rerio
ENSPTIG00000007745	-	80	71.498	ENSDNOG00000045949	-	96	70.870	Dasypus_novemcinctus
ENSPTIG00000007745	-	84	87.243	ENSDNOG00000007283	-	100	87.243	Dasypus_novemcinctus
ENSPTIG00000007745	-	96	83.333	ENSDORG00000007082	Smn1	99	76.871	Dipodomys_ordii
ENSPTIG00000007745	-	80	71.981	ENSETEG00000001406	-	93	71.354	Echinops_telfairi
ENSPTIG00000007745	-	93	36.755	ENSEBUG00000011902	smn1	92	38.489	Eptatretus_burgeri
ENSPTIG00000007745	-	96	78.571	ENSEASG00005018000	-	97	78.292	Equus_asinus_asinus
ENSPTIG00000007745	-	100	89.003	ENSECAG00000015215	-	100	89.003	Equus_caballus
ENSPTIG00000007745	-	87	80.952	ENSEEUG00000015777	-	100	80.952	Erinaceus_europaeus
ENSPTIG00000007745	-	89	65.753	ENSELUG00000018067	smn1	94	53.285	Esox_lucius
ENSPTIG00000007745	-	100	99.614	ENSFCAG00000028292	SMN	100	99.614	Felis_catus
ENSPTIG00000007745	-	90	62.642	ENSFALG00000012320	-	91	61.742	Ficedula_albicollis
ENSPTIG00000007745	-	100	79.599	ENSFDAG00000017683	-	100	79.599	Fukomys_damarensis
ENSPTIG00000007745	-	69	54.190	ENSFHEG00000018508	smn1	96	49.097	Fundulus_heteroclitus
ENSPTIG00000007745	-	96	50.357	ENSGMOG00000017279	smn1	95	49.286	Gadus_morhua
ENSPTIG00000007745	-	93	61.029	ENSGALG00000002430	SMN	95	59.191	Gallus_gallus
ENSPTIG00000007745	-	92	54.132	ENSGAFG00000009501	smn1	93	54.357	Gambusia_affinis
ENSPTIG00000007745	-	93	53.846	ENSGACG00000010584	smn1	91	52.963	Gasterosteus_aculeatus
ENSPTIG00000007745	-	92	38.119	ENSGAGG00000013639	-	92	37.912	Gopherus_agassizii
ENSPTIG00000007745	-	99	64.835	ENSGAGG00000011374	-	99	61.356	Gopherus_agassizii
ENSPTIG00000007745	-	95	87.398	ENSGGOG00000003872	-	100	88.259	Gorilla_gorilla
ENSPTIG00000007745	-	96	75.100	ENSGGOG00000026704	-	91	86.154	Gorilla_gorilla
ENSPTIG00000007745	-	92	52.632	ENSHBUG00000013987	smn1	94	55.805	Haplochromis_burtoni
ENSPTIG00000007745	-	100	79.433	ENSHGLG00000001018	-	100	79.264	Heterocephalus_glaber_female
ENSPTIG00000007745	-	100	77.891	ENSHGLG00000001905	-	100	78.547	Heterocephalus_glaber_female
ENSPTIG00000007745	-	100	79.433	ENSHGLG00100011252	-	100	79.264	Heterocephalus_glaber_male
ENSPTIG00000007745	-	96	77.305	ENSHGLG00100018676	-	100	77.978	Heterocephalus_glaber_male
ENSPTIG00000007745	-	90	50.183	ENSHCOG00000017136	smn1	87	50.562	Hippocampus_comes
ENSPTIG00000007745	-	95	51.264	ENSIPUG00000012580	smn1	86	51.625	Ictalurus_punctatus
ENSPTIG00000007745	-	91	88.346	ENSSTOG00000012288	-	100	87.455	Ictidomys_tridecemlineatus
ENSPTIG00000007745	-	67	62.644	ENSJJAG00000014853	-	89	62.857	Jaculus_jaculus
ENSPTIG00000007745	-	93	52.500	ENSKMAG00000007239	smn1	96	50.385	Kryptolebias_marmoratus
ENSPTIG00000007745	-	93	52.518	ENSLBEG00000022550	smn1	94	52.941	Labrus_bergylta
ENSPTIG00000007745	-	93	38.112	ENSLACG00000009808	-	93	38.811	Latimeria_chalumnae
ENSPTIG00000007745	-	92	51.822	ENSLOCG00000011339	smn1	93	53.659	Lepisosteus_oculatus
ENSPTIG00000007745	-	100	86.441	ENSLAFG00000003425	-	100	83.803	Loxodonta_africana
ENSPTIG00000007745	-	97	90.747	ENSMFAG00000031523	SMN1	99	89.384	Macaca_fascicularis
ENSPTIG00000007745	-	97	85.765	ENSMFAG00000008812	-	99	84.589	Macaca_fascicularis
ENSPTIG00000007745	-	97	90.747	ENSMMUG00000020214	SMN1	99	89.384	Macaca_mulatta
ENSPTIG00000007745	-	97	85.053	ENSMMUG00000030594	-	99	83.904	Macaca_mulatta
ENSPTIG00000007745	-	97	90.391	ENSMNEG00000035094	-	99	89.247	Macaca_nemestrina
ENSPTIG00000007745	-	76	77.828	ENSMNEG00000036423	-	86	77.828	Macaca_nemestrina
ENSPTIG00000007745	-	97	90.036	ENSMLEG00000041902	-	99	88.699	Mandrillus_leucophaeus
ENSPTIG00000007745	-	92	52.364	ENSMAMG00000011034	smn1	94	52.381	Mastacembelus_armatus
ENSPTIG00000007745	-	92	52.364	ENSMZEG00005013634	smn1	94	55.431	Maylandia_zebra
ENSPTIG00000007745	-	68	57.286	ENSMGAG00000008889	-	95	55.276	Meleagris_gallopavo
ENSPTIG00000007745	-	100	80.069	ENSMAUG00000010262	Smn1	100	81.100	Mesocricetus_auratus
ENSPTIG00000007745	-	97	75.352	ENSMICG00000034708	-	100	86.813	Microcebus_murinus
ENSPTIG00000007745	-	100	81.100	ENSMOCG00000017833	Smn1	100	81.100	Microtus_ochrogaster
ENSPTIG00000007745	-	93	50.182	ENSMMOG00000005504	smn1	93	50.588	Mola_mola
ENSPTIG00000007745	-	90	82.812	ENSMODG00000001436	-	99	69.625	Monodelphis_domestica
ENSPTIG00000007745	-	92	51.273	ENSMALG00000008025	smn1	94	52.574	Monopterus_albus
ENSPTIG00000007745	-	100	81.787	MGP_CAROLIEiJ_G0018836	Smn1	100	81.787	Mus_caroli
ENSPTIG00000007745	-	100	81.787	ENSMUSG00000021645	Smn1	100	81.787	Mus_musculus
ENSPTIG00000007745	-	100	78.351	MGP_PahariEiJ_G0015911	Smn1	100	79.381	Mus_pahari
ENSPTIG00000007745	-	100	81.100	MGP_SPRETEiJ_G0019718	Smn1	100	81.100	Mus_spretus
ENSPTIG00000007745	-	95	93.502	ENSMPUG00000014470	-	98	93.502	Mustela_putorius_furo
ENSPTIG00000007745	-	97	89.619	ENSMLUG00000010603	-	96	88.963	Myotis_lucifugus
ENSPTIG00000007745	-	100	83.849	ENSNGAG00000019833	Smn1	100	84.192	Nannospalax_galili
ENSPTIG00000007745	-	92	54.152	ENSNBRG00000023000	smn1	94	55.185	Neolamprologus_brichardi
ENSPTIG00000007745	-	99	89.384	ENSNLEG00000004454	-	99	89.384	Nomascus_leucogenys
ENSPTIG00000007745	-	78	63.158	ENSMEUG00000011393	-	99	64.629	Notamacropus_eugenii
ENSPTIG00000007745	-	87	81.028	ENSOPRG00000002015	-	100	81.818	Ochotona_princeps
ENSPTIG00000007745	-	95	82.609	ENSODEG00000015976	-	97	82.609	Octodon_degus
ENSPTIG00000007745	-	93	51.292	ENSONIG00000011799	smn1	95	54.412	Oreochromis_niloticus
ENSPTIG00000007745	-	82	91.304	ENSOANG00000001626	-	96	66.426	Ornithorhynchus_anatinus
ENSPTIG00000007745	-	99	83.562	ENSOCUG00000025183	-	100	78.305	Oryctolagus_cuniculus
ENSPTIG00000007745	-	99	80.068	ENSOCUG00000026649	-	99	82.770	Oryctolagus_cuniculus
ENSPTIG00000007745	-	100	85.274	ENSOCUG00000017097	-	99	85.274	Oryctolagus_cuniculus
ENSPTIG00000007745	-	60	60.645	ENSORLG00000010552	smn1	94	52.381	Oryzias_latipes
ENSPTIG00000007745	-	92	53.815	ENSORLG00020007936	smn1	93	54.878	Oryzias_latipes_hni
ENSPTIG00000007745	-	93	51.460	ENSORLG00015022425	smn1	94	52.381	Oryzias_latipes_hsok
ENSPTIG00000007745	-	93	54.317	ENSOMEG00000007824	smn1	94	53.261	Oryzias_melastigma
ENSPTIG00000007745	-	90	88.095	ENSOGAG00000031414	-	100	77.855	Otolemur_garnettii
ENSPTIG00000007745	-	95	84.420	ENSOARG00000005425	-	100	84.420	Ovis_aries
ENSPTIG00000007745	-	97	90.391	ENSPPAG00000036640	-	99	89.333	Pan_paniscus
ENSPTIG00000007745	-	100	100.000	ENSPPRG00000005575	-	100	100.000	Panthera_pardus
ENSPTIG00000007745	-	97	89.437	ENSPTRG00000016955	-	99	88.475	Pan_troglodytes
ENSPTIG00000007745	-	99	89.384	ENSPANG00000013601	-	99	89.384	Papio_anubis
ENSPTIG00000007745	-	96	84.892	ENSPANG00000000253	-	98	83.737	Papio_anubis
ENSPTIG00000007745	-	55	91.892	ENSPKIG00000011096	smn1	94	51.673	Paramormyrops_kingsleyae
ENSPTIG00000007745	-	93	60.351	ENSPSIG00000014787	-	90	58.511	Pelodiscus_sinensis
ENSPTIG00000007745	-	93	49.104	ENSPMGG00000012285	smn1	94	50.189	Periophthalmus_magnuspinnatus
ENSPTIG00000007745	-	90	41.392	ENSPMAG00000005004	smn1	96	39.655	Petromyzon_marinus
ENSPTIG00000007745	-	90	82.812	ENSPCIG00000025764	-	100	69.625	Phascolarctos_cinereus
ENSPTIG00000007745	-	93	54.348	ENSPFOG00000007786	smn1	94	53.875	Poecilia_formosa
ENSPTIG00000007745	-	92	56.612	ENSPLAG00000012071	smn1	93	56.846	Poecilia_latipinna
ENSPTIG00000007745	-	92	56.198	ENSPMEG00000017085	smn1	93	56.432	Poecilia_mexicana
ENSPTIG00000007745	-	92	57.025	ENSPREG00000005824	smn1	93	57.261	Poecilia_reticulata
ENSPTIG00000007745	-	85	62.557	ENSPPYG00000019189	-	99	60.274	Pongo_abelii
ENSPTIG00000007745	-	92	89.139	ENSPPYG00000015533	-	96	89.139	Pongo_abelii
ENSPTIG00000007745	-	92	82.353	ENSPCAG00000004187	-	100	81.618	Procavia_capensis
ENSPTIG00000007745	-	87	74.684	ENSPCOG00000022307	-	100	70.566	Propithecus_coquereli
ENSPTIG00000007745	-	97	93.262	ENSPVAG00000005977	-	100	92.177	Pteropus_vampyrus
ENSPTIG00000007745	-	92	54.152	ENSPNYG00000014148	smn1	94	55.185	Pundamilia_nyererei
ENSPTIG00000007745	-	93	49.819	ENSPNAG00000014007	smn1	82	48.571	Pygocentrus_nattereri
ENSPTIG00000007745	-	100	80.822	ENSRNOG00000018067	Smn1	100	80.822	Rattus_norvegicus
ENSPTIG00000007745	-	97	90.391	ENSRBIG00000037052	-	99	89.041	Rhinopithecus_bieti
ENSPTIG00000007745	-	93	76.984	ENSRBIG00000036775	-	92	76.557	Rhinopithecus_bieti
ENSPTIG00000007745	-	97	90.391	ENSRROG00000039399	-	99	89.041	Rhinopithecus_roxellana
ENSPTIG00000007745	-	98	74.737	ENSRROG00000031088	-	96	74.737	Rhinopithecus_roxellana
ENSPTIG00000007745	-	96	90.000	ENSSBOG00000011665	-	99	87.308	Saimiri_boliviensis_boliviensis
ENSPTIG00000007745	-	84	81.673	ENSSBOG00000020112	-	87	82.072	Saimiri_boliviensis_boliviensis
ENSPTIG00000007745	-	91	80.000	ENSSHAG00000001499	-	97	69.630	Sarcophilus_harrisii
ENSPTIG00000007745	-	92	51.807	ENSSFOG00015015507	smn1	94	53.036	Scleropages_formosus
ENSPTIG00000007745	-	93	50.000	ENSSMAG00000007922	smn1	94	49.077	Scophthalmus_maximus
ENSPTIG00000007745	-	93	52.518	ENSSDUG00000018533	smn1	94	53.405	Seriola_dumerili
ENSPTIG00000007745	-	93	52.518	ENSSLDG00000021135	smn1	94	53.405	Seriola_lalandi_dorsalis
ENSPTIG00000007745	-	97	65.556	ENSSPUG00000000373	-	96	63.763	Sphenodon_punctatus
ENSPTIG00000007745	-	92	53.333	ENSSPAG00000004345	smn1	94	53.360	Stegastes_partitus
ENSPTIG00000007745	-	98	69.412	ENSSSCG00000029127	-	99	69.412	Sus_scrofa
ENSPTIG00000007745	-	96	93.939	ENSSSCG00000016970	-	100	91.497	Sus_scrofa
ENSPTIG00000007745	-	74	61.860	ENSSSCG00000033865	-	95	62.963	Sus_scrofa
ENSPTIG00000007745	-	95	60.072	ENSTGUG00000001548	-	96	62.030	Taeniopygia_guttata
ENSPTIG00000007745	-	92	47.794	ENSTRUG00000000736	smn	95	47.636	Takifugu_rubripes
ENSPTIG00000007745	-	51	61.654	ENSTNIG00000009892	smn1	95	46.975	Tetraodon_nigroviridis
ENSPTIG00000007745	-	75	87.047	ENSTBEG00000002399	-	93	87.047	Tupaia_belangeri
ENSPTIG00000007745	-	97	85.512	ENSTTRG00000005080	-	100	85.135	Tursiops_truncatus
ENSPTIG00000007745	-	71	92.973	ENSUAMG00000024947	-	71	92.746	Ursus_americanus
ENSPTIG00000007745	-	97	93.640	ENSUMAG00000007842	-	74	93.471	Ursus_maritimus
ENSPTIG00000007745	-	71	100.000	ENSVPAG00000009887	-	100	77.500	Vicugna_pacos
ENSPTIG00000007745	-	100	91.753	ENSVVUG00000006934	-	100	91.753	Vulpes_vulpes
ENSPTIG00000007745	-	92	65.432	ENSXETG00000018189	smn2	95	51.916	Xenopus_tropicalis
ENSPTIG00000007745	-	91	33.818	ENSXETG00000004912	-	100	37.294	Xenopus_tropicalis
ENSPTIG00000007745	-	93	54.508	ENSXMAG00000001521	smn1	95	54.508	Xiphophorus_maculatus