EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000007823 (Gene tree)
Gene ID: 102962898
Gene Symbol: ZC3HC1
Alias: -
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 19746 bases
Position: chrKE721703.1:1363326-1383071
Accession: 102962898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000005696	zf-C3HC	PF07967.13	3.4e-37	1	1
ENSPTIP00000005714	zf-C3HC	PF07967.13	1.8e-36	1	1
ENSPTIP00000005723	zf-C3HC	PF07967.13	7.6e-35	1	1
ENSPTIP00000005723	Rsm1	PF08600.10	4.4e-16	1	1
ENSPTIP00000005696	Rsm1	PF08600.10	5.4e-16	1	1
ENSPTIP00000005714	Rsm1	PF08600.10	4e-15	1	2
ENSPTIP00000005714	Rsm1	PF08600.10	4e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000009509	ZC3HC1-202	1296	-	ENSPTIP00000005714	431 (aa)	-	-
ENSPTIT00000009518	ZC3HC1-203	1419	-	ENSPTIP00000005723	472 (aa)	-	-
ENSPTIT00000009490	ZC3HC1-201	1893	XM_007078080	ENSPTIP00000005696	502 (aa)	XP_007078142	UPI00042BAA6D

Gene Model

Click here to download ENSPTIG00000007823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000007823's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000007823	ZC3HC1	99	91.617	ENSG00000091732	ZC3HC1	99	91.617	Homo_sapiens
ENSPTIG00000007823	ZC3HC1	93	48.024	ENSAPOG00000009078	zc3hc1	95	44.242	Acanthochromis_polyacanthus
ENSPTIG00000007823	ZC3HC1	100	93.254	ENSAMEG00000005425	ZC3HC1	100	93.254	Ailuropoda_melanoleuca
ENSPTIG00000007823	ZC3HC1	92	46.037	ENSACIG00000019513	zc3hc1	95	41.851	Amphilophus_citrinellus
ENSPTIG00000007823	ZC3HC1	93	48.936	ENSAOCG00000024310	zc3hc1	95	44.848	Amphiprion_ocellaris
ENSPTIG00000007823	ZC3HC1	93	48.936	ENSAPEG00000004907	zc3hc1	95	44.848	Amphiprion_percula
ENSPTIG00000007823	ZC3HC1	86	46.009	ENSATEG00000016898	zc3hc1	85	46.853	Anabas_testudineus
ENSPTIG00000007823	ZC3HC1	94	60.449	ENSAPLG00000003832	ZC3HC1	99	61.573	Anas_platyrhynchos
ENSPTIG00000007823	ZC3HC1	100	60.547	ENSACAG00000001638	ZC3HC1	100	60.827	Anolis_carolinensis
ENSPTIG00000007823	ZC3HC1	100	90.023	ENSANAG00000022213	ZC3HC1	100	90.023	Aotus_nancymaae
ENSPTIG00000007823	ZC3HC1	91	44.222	ENSACLG00000025033	zc3hc1	98	43.897	Astatotilapia_calliptera
ENSPTIG00000007823	ZC3HC1	94	43.424	ENSAMXG00000036792	zc3hc1	97	43.424	Astyanax_mexicanus
ENSPTIG00000007823	ZC3HC1	100	91.176	ENSBTAG00000011247	ZC3HC1	100	89.243	Bos_taurus
ENSPTIG00000007823	ZC3HC1	100	89.841	ENSCJAG00000010536	ZC3HC1	100	89.841	Callithrix_jacchus
ENSPTIG00000007823	ZC3HC1	100	93.028	ENSCAFG00000028735	-	100	93.028	Canis_familiaris
ENSPTIG00000007823	ZC3HC1	100	93.267	ENSCAFG00000001499	-	99	93.267	Canis_familiaris
ENSPTIG00000007823	ZC3HC1	100	93.028	ENSCAFG00000029401	-	99	93.028	Canis_familiaris
ENSPTIG00000007823	ZC3HC1	100	93.426	ENSCAFG00000031850	-	100	93.426	Canis_familiaris
ENSPTIG00000007823	ZC3HC1	100	92.262	ENSCAFG00020023333	-	100	92.262	Canis_lupus_dingo
ENSPTIG00000007823	ZC3HC1	100	93.227	ENSCAFG00020006829	-	100	93.227	Canis_lupus_dingo
ENSPTIG00000007823	ZC3HC1	100	83.068	ENSCHIG00000014103	ZC3HC1	100	83.068	Capra_hircus
ENSPTIG00000007823	ZC3HC1	100	88.645	ENSTSYG00000002843	ZC3HC1	100	88.645	Carlito_syrichta
ENSPTIG00000007823	ZC3HC1	96	62.281	ENSCAPG00000016300	ZC3HC1	93	76.301	Cavia_aperea
ENSPTIG00000007823	ZC3HC1	100	85.615	ENSCPOG00000014034	ZC3HC1	100	85.615	Cavia_porcellus
ENSPTIG00000007823	ZC3HC1	100	72.311	ENSCCAG00000020384	ZC3HC1	99	88.053	Cebus_capucinus
ENSPTIG00000007823	ZC3HC1	100	91.434	ENSCATG00000023130	ZC3HC1	100	91.434	Cercocebus_atys
ENSPTIG00000007823	ZC3HC1	100	62.550	ENSCLAG00000008260	ZC3HC1	100	60.835	Chinchilla_lanigera
ENSPTIG00000007823	ZC3HC1	78	90.437	ENSCSAG00000009881	ZC3HC1	97	90.437	Chlorocebus_sabaeus
ENSPTIG00000007823	ZC3HC1	96	87.583	ENSCHOG00000011846	ZC3HC1	99	88.914	Choloepus_hoffmanni
ENSPTIG00000007823	ZC3HC1	100	66.034	ENSCPBG00000017519	ZC3HC1	100	67.659	Chrysemys_picta_bellii
ENSPTIG00000007823	ZC3HC1	100	91.235	ENSCANG00000029091	ZC3HC1	100	91.235	Colobus_angolensis_palliatus
ENSPTIG00000007823	ZC3HC1	100	85.657	ENSCGRG00001018805	Zc3hc1	100	85.657	Cricetulus_griseus_chok1gshd
ENSPTIG00000007823	ZC3HC1	100	84.462	ENSCGRG00000017114	Zc3hc1	100	84.462	Cricetulus_griseus_crigri
ENSPTIG00000007823	ZC3HC1	97	42.259	ENSCSEG00000009284	zc3hc1	94	41.551	Cynoglossus_semilaevis
ENSPTIG00000007823	ZC3HC1	93	45.294	ENSCVAG00000011566	zc3hc1	94	42.181	Cyprinodon_variegatus
ENSPTIG00000007823	ZC3HC1	95	47.423	ENSDARG00000062651	zc3hc1	95	46.804	Danio_rerio
ENSPTIG00000007823	ZC3HC1	100	87.849	ENSDNOG00000045016	ZC3HC1	100	87.849	Dasypus_novemcinctus
ENSPTIG00000007823	ZC3HC1	100	78.088	ENSDORG00000008697	Zc3hc1	100	78.088	Dipodomys_ordii
ENSPTIG00000007823	ZC3HC1	96	89.602	ENSEASG00005008789	ZC3HC1	97	90.929	Equus_asinus_asinus
ENSPTIG00000007823	ZC3HC1	100	91.054	ENSECAG00000017886	ZC3HC1	100	91.054	Equus_caballus
ENSPTIG00000007823	ZC3HC1	84	82.099	ENSEEUG00000003123	ZC3HC1	84	82.099	Erinaceus_europaeus
ENSPTIG00000007823	ZC3HC1	95	43.800	ENSELUG00000023168	zc3hc1	94	45.363	Esox_lucius
ENSPTIG00000007823	ZC3HC1	100	99.602	ENSFCAG00000010429	ZC3HC1	100	99.602	Felis_catus
ENSPTIG00000007823	ZC3HC1	96	58.974	ENSFALG00000005006	ZC3HC1	100	60.043	Ficedula_albicollis
ENSPTIG00000007823	ZC3HC1	100	86.853	ENSFDAG00000019897	ZC3HC1	100	86.853	Fukomys_damarensis
ENSPTIG00000007823	ZC3HC1	95	44.928	ENSFHEG00000020149	zc3hc1	99	41.006	Fundulus_heteroclitus
ENSPTIG00000007823	ZC3HC1	94	42.708	ENSGMOG00000002914	zc3hc1	95	41.667	Gadus_morhua
ENSPTIG00000007823	ZC3HC1	99	62.151	ENSGALG00000008003	ZC3HC1	99	62.151	Gallus_gallus
ENSPTIG00000007823	ZC3HC1	95	45.058	ENSGAFG00000016095	zc3hc1	96	42.857	Gambusia_affinis
ENSPTIG00000007823	ZC3HC1	93	47.734	ENSGACG00000019706	zc3hc1	94	45.492	Gasterosteus_aculeatus
ENSPTIG00000007823	ZC3HC1	82	69.565	ENSGAGG00000016106	ZC3HC1	100	69.565	Gopherus_agassizii
ENSPTIG00000007823	ZC3HC1	99	91.617	ENSGGOG00000015504	ZC3HC1	99	91.617	Gorilla_gorilla
ENSPTIG00000007823	ZC3HC1	92	46.341	ENSHBUG00000008347	zc3hc1	94	43.149	Haplochromis_burtoni
ENSPTIG00000007823	ZC3HC1	100	88.645	ENSHGLG00000005085	ZC3HC1	100	88.645	Heterocephalus_glaber_female
ENSPTIG00000007823	ZC3HC1	100	88.446	ENSHGLG00100011395	ZC3HC1	100	88.446	Heterocephalus_glaber_male
ENSPTIG00000007823	ZC3HC1	95	42.149	ENSHCOG00000014309	zc3hc1	95	41.856	Hippocampus_comes
ENSPTIG00000007823	ZC3HC1	100	87.849	ENSSTOG00000023599	-	100	87.849	Ictidomys_tridecemlineatus
ENSPTIG00000007823	ZC3HC1	93	48.428	ENSKMAG00000015315	zc3hc1	88	43.532	Kryptolebias_marmoratus
ENSPTIG00000007823	ZC3HC1	94	45.304	ENSLBEG00000017325	zc3hc1	95	43.313	Labrus_bergylta
ENSPTIG00000007823	ZC3HC1	80	53.803	ENSLACG00000013032	ZC3HC1	97	54.390	Latimeria_chalumnae
ENSPTIG00000007823	ZC3HC1	99	53.602	ENSLOCG00000015963	zc3hc1	99	52.165	Lepisosteus_oculatus
ENSPTIG00000007823	ZC3HC1	100	87.154	ENSLAFG00000001292	ZC3HC1	100	87.154	Loxodonta_africana
ENSPTIG00000007823	ZC3HC1	100	91.633	ENSMFAG00000030176	ZC3HC1	100	91.633	Macaca_fascicularis
ENSPTIG00000007823	ZC3HC1	100	91.415	ENSMMUG00000006155	ZC3HC1	100	91.415	Macaca_mulatta
ENSPTIG00000007823	ZC3HC1	100	91.833	ENSMNEG00000011833	ZC3HC1	100	91.833	Macaca_nemestrina
ENSPTIG00000007823	ZC3HC1	100	91.647	ENSMLEG00000027328	ZC3HC1	100	91.647	Mandrillus_leucophaeus
ENSPTIG00000007823	ZC3HC1	93	48.024	ENSMAMG00000010691	zc3hc1	94	44.286	Mastacembelus_armatus
ENSPTIG00000007823	ZC3HC1	92	46.037	ENSMZEG00005007142	zc3hc1	94	42.945	Maylandia_zebra
ENSPTIG00000007823	ZC3HC1	99	61.429	ENSMGAG00000002977	ZC3HC1	99	61.644	Meleagris_gallopavo
ENSPTIG00000007823	ZC3HC1	87	80.241	ENSMAUG00000017032	Zc3hc1	92	80.241	Mesocricetus_auratus
ENSPTIG00000007823	ZC3HC1	100	89.641	ENSMICG00000009167	ZC3HC1	100	89.641	Microcebus_murinus
ENSPTIG00000007823	ZC3HC1	100	85.060	ENSMOCG00000015239	Zc3hc1	100	85.060	Microtus_ochrogaster
ENSPTIG00000007823	ZC3HC1	91	41.778	ENSMMOG00000002204	zc3hc1	98	41.333	Mola_mola
ENSPTIG00000007823	ZC3HC1	100	64.038	ENSMODG00000014630	ZC3HC1	100	64.038	Monodelphis_domestica
ENSPTIG00000007823	ZC3HC1	93	47.110	ENSMALG00000014447	zc3hc1	95	43.775	Monopterus_albus
ENSPTIG00000007823	ZC3HC1	100	84.661	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	84.661	Mus_caroli
ENSPTIG00000007823	ZC3HC1	100	84.064	ENSMUSG00000039130	Zc3hc1	100	84.064	Mus_musculus
ENSPTIG00000007823	ZC3HC1	100	79.084	MGP_PahariEiJ_G0021941	Zc3hc1	100	79.084	Mus_pahari
ENSPTIG00000007823	ZC3HC1	100	84.064	MGP_SPRETEiJ_G0029183	Zc3hc1	100	84.064	Mus_spretus
ENSPTIG00000007823	ZC3HC1	95	93.737	ENSMPUG00000005297	ZC3HC1	95	93.737	Mustela_putorius_furo
ENSPTIG00000007823	ZC3HC1	100	88.515	ENSMLUG00000000063	-	100	88.515	Myotis_lucifugus
ENSPTIG00000007823	ZC3HC1	72	82.216	ENSMLUG00000029228	-	99	82.216	Myotis_lucifugus
ENSPTIG00000007823	ZC3HC1	100	85.686	ENSNGAG00000019014	Zc3hc1	100	85.686	Nannospalax_galili
ENSPTIG00000007823	ZC3HC1	92	46.341	ENSNBRG00000004577	zc3hc1	94	43.033	Neolamprologus_brichardi
ENSPTIG00000007823	ZC3HC1	99	90.020	ENSNLEG00000012698	ZC3HC1	99	90.020	Nomascus_leucogenys
ENSPTIG00000007823	ZC3HC1	100	78.685	ENSMEUG00000011023	ZC3HC1	100	78.685	Notamacropus_eugenii
ENSPTIG00000007823	ZC3HC1	76	82.946	ENSOPRG00000007867	-	68	82.946	Ochotona_princeps
ENSPTIG00000007823	ZC3HC1	100	85.657	ENSODEG00000014604	ZC3HC1	100	85.955	Octodon_degus
ENSPTIG00000007823	ZC3HC1	93	46.951	ENSONIG00000011644	zc3hc1	94	43.558	Oreochromis_niloticus
ENSPTIG00000007823	ZC3HC1	96	69.181	ENSOANG00000011460	ZC3HC1	100	70.474	Ornithorhynchus_anatinus
ENSPTIG00000007823	ZC3HC1	100	87.608	ENSOCUG00000017137	ZC3HC1	100	84.554	Oryctolagus_cuniculus
ENSPTIG00000007823	ZC3HC1	94	47.892	ENSORLG00000014409	zc3hc1	94	44.694	Oryzias_latipes
ENSPTIG00000007823	ZC3HC1	94	47.590	ENSORLG00020015874	zc3hc1	94	44.490	Oryzias_latipes_hni
ENSPTIG00000007823	ZC3HC1	95	43.763	ENSORLG00015014641	zc3hc1	94	43.763	Oryzias_latipes_hsok
ENSPTIG00000007823	ZC3HC1	95	45.946	ENSOMEG00000000215	zc3hc1	95	45.051	Oryzias_melastigma
ENSPTIG00000007823	ZC3HC1	94	48.348	ENSOMEG00000020604	zc3hc1	95	46.296	Oryzias_melastigma
ENSPTIG00000007823	ZC3HC1	100	84.064	ENSOGAG00000026193	ZC3HC1	100	84.064	Otolemur_garnettii
ENSPTIG00000007823	ZC3HC1	100	91.545	ENSOARG00000004907	ZC3HC1	99	89.505	Ovis_aries
ENSPTIG00000007823	ZC3HC1	99	91.816	ENSPPAG00000043172	ZC3HC1	99	91.816	Pan_paniscus
ENSPTIG00000007823	ZC3HC1	100	99.706	ENSPPRG00000001004	ZC3HC1	100	99.304	Panthera_pardus
ENSPTIG00000007823	ZC3HC1	99	91.417	ENSPTRG00000019685	ZC3HC1	99	91.417	Pan_troglodytes
ENSPTIG00000007823	ZC3HC1	100	91.415	ENSPANG00000014229	ZC3HC1	100	91.415	Papio_anubis
ENSPTIG00000007823	ZC3HC1	94	50.784	ENSPKIG00000007172	zc3hc1	95	48.233	Paramormyrops_kingsleyae
ENSPTIG00000007823	ZC3HC1	94	66.775	ENSPSIG00000016646	ZC3HC1	100	60.429	Pelodiscus_sinensis
ENSPTIG00000007823	ZC3HC1	94	42.105	ENSPMGG00000003548	zc3hc1	94	42.105	Periophthalmus_magnuspinnatus
ENSPTIG00000007823	ZC3HC1	100	86.079	ENSPEMG00000000514	Zc3hc1	100	86.079	Peromyscus_maniculatus_bairdii
ENSPTIG00000007823	ZC3HC1	99	75.848	ENSPCIG00000020619	ZC3HC1	100	79.692	Phascolarctos_cinereus
ENSPTIG00000007823	ZC3HC1	94	45.294	ENSPFOG00000003466	zc3hc1	96	42.771	Poecilia_formosa
ENSPTIG00000007823	ZC3HC1	94	45.000	ENSPLAG00000022211	zc3hc1	96	42.137	Poecilia_latipinna
ENSPTIG00000007823	ZC3HC1	94	45.294	ENSPMEG00000001458	zc3hc1	96	42.771	Poecilia_mexicana
ENSPTIG00000007823	ZC3HC1	96	43.347	ENSPREG00000004004	zc3hc1	96	42.771	Poecilia_reticulata
ENSPTIG00000007823	ZC3HC1	99	83.300	ENSPPYG00000017998	ZC3HC1	99	83.300	Pongo_abelii
ENSPTIG00000007823	ZC3HC1	96	83.444	ENSPCAG00000001182	ZC3HC1	100	84.348	Procavia_capensis
ENSPTIG00000007823	ZC3HC1	100	90.837	ENSPCOG00000017354	ZC3HC1	100	90.837	Propithecus_coquereli
ENSPTIG00000007823	ZC3HC1	100	84.861	ENSPVAG00000003195	ZC3HC1	100	84.462	Pteropus_vampyrus
ENSPTIG00000007823	ZC3HC1	92	46.037	ENSPNYG00000020692	zc3hc1	94	42.945	Pundamilia_nyererei
ENSPTIG00000007823	ZC3HC1	99	43.606	ENSPNAG00000020746	zc3hc1	95	44.792	Pygocentrus_nattereri
ENSPTIG00000007823	ZC3HC1	100	84.493	ENSRNOG00000010154	Zc3hc1	100	84.493	Rattus_norvegicus
ENSPTIG00000007823	ZC3HC1	96	90.066	ENSRBIG00000029409	ZC3HC1	100	91.391	Rhinopithecus_bieti
ENSPTIG00000007823	ZC3HC1	100	91.235	ENSRROG00000041831	ZC3HC1	100	91.235	Rhinopithecus_roxellana
ENSPTIG00000007823	ZC3HC1	88	90.441	ENSSBOG00000032787	ZC3HC1	100	90.441	Saimiri_boliviensis_boliviensis
ENSPTIG00000007823	ZC3HC1	96	77.363	ENSSHAG00000002529	ZC3HC1	100	77.849	Sarcophilus_harrisii
ENSPTIG00000007823	ZC3HC1	96	49.455	ENSSFOG00015003667	zc3hc1	91	48.454	Scleropages_formosus
ENSPTIG00000007823	ZC3HC1	95	43.976	ENSSMAG00000000647	zc3hc1	86	44.177	Scophthalmus_maximus
ENSPTIG00000007823	ZC3HC1	98	44.082	ENSSDUG00000004241	zc3hc1	93	44.422	Seriola_dumerili
ENSPTIG00000007823	ZC3HC1	95	45.010	ENSSLDG00000025056	zc3hc1	93	44.422	Seriola_lalandi_dorsalis
ENSPTIG00000007823	ZC3HC1	99	79.242	ENSSARG00000012013	ZC3HC1	99	79.242	Sorex_araneus
ENSPTIG00000007823	ZC3HC1	92	56.818	ENSSPUG00000000778	ZC3HC1	86	58.621	Sphenodon_punctatus
ENSPTIG00000007823	ZC3HC1	95	46.045	ENSSPAG00000020041	zc3hc1	95	45.455	Stegastes_partitus
ENSPTIG00000007823	ZC3HC1	100	89.243	ENSSSCG00000016565	ZC3HC1	100	89.243	Sus_scrofa
ENSPTIG00000007823	ZC3HC1	52	58.130	ENSTGUG00000016262	ZC3HC1	100	58.130	Taeniopygia_guttata
ENSPTIG00000007823	ZC3HC1	93	48.113	ENSTRUG00000020077	zc3hc1	95	41.870	Takifugu_rubripes
ENSPTIG00000007823	ZC3HC1	93	46.084	ENSTNIG00000007585	zc3hc1	99	42.394	Tetraodon_nigroviridis
ENSPTIG00000007823	ZC3HC1	99	79.441	ENSTBEG00000005216	ZC3HC1	99	79.441	Tupaia_belangeri
ENSPTIG00000007823	ZC3HC1	100	86.258	ENSTTRG00000008458	ZC3HC1	100	90.208	Tursiops_truncatus
ENSPTIG00000007823	ZC3HC1	100	93.625	ENSUAMG00000020249	ZC3HC1	100	93.625	Ursus_americanus
ENSPTIG00000007823	ZC3HC1	100	93.227	ENSUMAG00000009268	ZC3HC1	100	93.227	Ursus_maritimus
ENSPTIG00000007823	ZC3HC1	90	91.837	ENSVPAG00000010846	ZC3HC1	77	91.837	Vicugna_pacos
ENSPTIG00000007823	ZC3HC1	96	93.125	ENSVVUG00000012386	ZC3HC1	99	93.125	Vulpes_vulpes
ENSPTIG00000007823	ZC3HC1	91	52.575	ENSXETG00000033900	zc3hc1	95	52.575	Xenopus_tropicalis
ENSPTIG00000007823	ZC3HC1	96	44.231	ENSXCOG00000013570	zc3hc1	97	42.785	Xiphophorus_couchianus
ENSPTIG00000007823	ZC3HC1	97	43.129	ENSXMAG00000010979	zc3hc1	98	42.526	Xiphophorus_maculatus