EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000007892 (Gene tree)
Gene ID: -
Gene Symbol: SMG5
Alias: -
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 22856 bases
Position: chrKE721870.1:661115-683970
Accession: 102966954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000005790	EST1	PF10374.9	2.9e-24	1	1
ENSPTIP00000005790	EST1_DNA_bind	PF10373.9	6.5e-24	1	1
ENSPTIP00000005790	PIN_4	PF13638.6	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000009587	SMG5-201	2889	XM_015540118	ENSPTIP00000005790	962 (aa)	XP_015395604	-

Gene Model

Click here to download ENSPTIG00000007892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000007892's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000007892	SMG5	98	85.729	ENSG00000198952	SMG5	99	85.672	Homo_sapiens
ENSPTIG00000007892	SMG5	98	63.711	ENSAPOG00000019690	smg5	90	75.430	Acanthochromis_polyacanthus
ENSPTIG00000007892	SMG5	96	89.004	ENSAMEG00000014458	SMG5	99	88.391	Ailuropoda_melanoleuca
ENSPTIG00000007892	SMG5	98	61.056	ENSACIG00000001353	smg5	97	62.165	Amphilophus_citrinellus
ENSPTIG00000007892	SMG5	98	62.677	ENSAOCG00000019483	smg5	95	63.507	Amphiprion_ocellaris
ENSPTIG00000007892	SMG5	100	61.577	ENSAPEG00000022949	smg5	99	62.387	Amphiprion_percula
ENSPTIG00000007892	SMG5	98	61.623	ENSATEG00000005348	smg5	97	62.262	Anabas_testudineus
ENSPTIG00000007892	SMG5	98	72.566	ENSAPLG00000010263	SMG5	99	72.566	Anas_platyrhynchos
ENSPTIG00000007892	SMG5	98	85.890	ENSANAG00000032899	SMG5	99	85.572	Aotus_nancymaae
ENSPTIG00000007892	SMG5	98	61.359	ENSACLG00000009311	smg5	90	76.179	Astatotilapia_calliptera
ENSPTIG00000007892	SMG5	98	41.355	ENSBTAG00000021747	-	96	40.587	Bos_taurus
ENSPTIG00000007892	SMG5	98	86.134	ENSBTAG00000009435	SMG5	99	85.771	Bos_taurus
ENSPTIG00000007892	SMG5	98	85.526	ENSCJAG00000005684	SMG5	99	85.672	Callithrix_jacchus
ENSPTIG00000007892	SMG5	99	88.188	ENSCAFG00000016839	SMG5	99	88.600	Canis_familiaris
ENSPTIG00000007892	SMG5	99	88.188	ENSCAFG00020006061	SMG5	99	88.600	Canis_lupus_dingo
ENSPTIG00000007892	SMG5	98	41.667	ENSCHIG00000006323	-	97	41.135	Capra_hircus
ENSPTIG00000007892	SMG5	98	86.134	ENSCHIG00000007709	SMG5	99	85.473	Capra_hircus
ENSPTIG00000007892	SMG5	98	86.148	ENSTSYG00000004099	SMG5	99	85.487	Carlito_syrichta
ENSPTIG00000007892	SMG5	96	65.291	ENSCAPG00000003631	SMG5	99	65.787	Cavia_aperea
ENSPTIG00000007892	SMG5	96	86.321	ENSCPOG00000015696	SMG5	96	85.758	Cavia_porcellus
ENSPTIG00000007892	SMG5	98	86.094	ENSCCAG00000027409	SMG5	99	85.771	Cebus_capucinus
ENSPTIG00000007892	SMG5	98	85.628	ENSCATG00000030539	SMG5	99	85.672	Cercocebus_atys
ENSPTIG00000007892	SMG5	99	84.493	ENSCLAG00000003983	SMG5	99	85.204	Chinchilla_lanigera
ENSPTIG00000007892	SMG5	98	85.613	ENSCSAG00000002120	SMG5	99	85.672	Chlorocebus_sabaeus
ENSPTIG00000007892	SMG5	54	83.394	ENSCHOG00000008741	-	57	83.394	Choloepus_hoffmanni
ENSPTIG00000007892	SMG5	92	71.921	ENSCPBG00000025848	SMG5	99	71.546	Chrysemys_picta_bellii
ENSPTIG00000007892	SMG5	93	32.984	ENSCING00000008706	-	97	32.531	Ciona_intestinalis
ENSPTIG00000007892	SMG5	98	81.984	ENSCANG00000029208	SMG5	99	82.388	Colobus_angolensis_palliatus
ENSPTIG00000007892	SMG5	98	82.912	ENSCGRG00001006336	Smg5	99	81.791	Cricetulus_griseus_chok1gshd
ENSPTIG00000007892	SMG5	96	84.145	ENSCGRG00000005111	Smg5	99	82.977	Cricetulus_griseus_crigri
ENSPTIG00000007892	SMG5	98	60.303	ENSCSEG00000014220	smg5	97	60.812	Cynoglossus_semilaevis
ENSPTIG00000007892	SMG5	98	56.041	ENSCVAG00000000529	smg5	96	56.244	Cyprinodon_variegatus
ENSPTIG00000007892	SMG5	91	77.273	ENSDARG00000041481	smg5	97	58.170	Danio_rerio
ENSPTIG00000007892	SMG5	98	81.966	ENSDNOG00000000051	SMG5	99	81.809	Dasypus_novemcinctus
ENSPTIG00000007892	SMG5	94	33.298	ENSDNOG00000039862	-	100	33.795	Dasypus_novemcinctus
ENSPTIG00000007892	SMG5	98	83.855	ENSDORG00000010382	Smg5	99	83.101	Dipodomys_ordii
ENSPTIG00000007892	SMG5	79	97.087	ENSETEG00000010336	SMG5	82	97.087	Echinops_telfairi
ENSPTIG00000007892	SMG5	92	45.217	ENSEBUG00000003739	smg5	98	44.565	Eptatretus_burgeri
ENSPTIG00000007892	SMG5	96	87.967	ENSEASG00005019122	SMG5	96	87.258	Equus_asinus_asinus
ENSPTIG00000007892	SMG5	96	87.967	ENSECAG00000001389	SMG5	96	87.258	Equus_caballus
ENSPTIG00000007892	SMG5	73	93.948	ENSEEUG00000012690	SMG5	68	93.948	Erinaceus_europaeus
ENSPTIG00000007892	SMG5	98	61.345	ENSELUG00000012585	smg5	97	61.546	Esox_lucius
ENSPTIG00000007892	SMG5	98	91.455	ENSFCAG00000011783	SMG5	99	90.809	Felis_catus
ENSPTIG00000007892	SMG5	61	78.930	ENSFALG00000001166	-	99	78.930	Ficedula_albicollis
ENSPTIG00000007892	SMG5	98	85.219	ENSFDAG00000017388	SMG5	99	85.423	Fukomys_damarensis
ENSPTIG00000007892	SMG5	97	61.498	ENSFHEG00000013939	smg5	99	61.392	Fundulus_heteroclitus
ENSPTIG00000007892	SMG5	96	58.851	ENSGMOG00000007310	smg5	89	74.092	Gadus_morhua
ENSPTIG00000007892	SMG5	99	71.078	ENSGALG00000029918	-	99	69.866	Gallus_gallus
ENSPTIG00000007892	SMG5	92	72.967	ENSGAFG00000021691	smg5	97	58.492	Gambusia_affinis
ENSPTIG00000007892	SMG5	88	73.913	ENSGACG00000013142	smg5	90	75.309	Gasterosteus_aculeatus
ENSPTIG00000007892	SMG5	98	73.307	ENSGAGG00000016131	SMG5	97	72.718	Gopherus_agassizii
ENSPTIG00000007892	SMG5	98	85.526	ENSGGOG00000010932	SMG5	99	85.672	Gorilla_gorilla
ENSPTIG00000007892	SMG5	98	60.321	ENSHBUG00000008654	smg5	90	76.179	Haplochromis_burtoni
ENSPTIG00000007892	SMG5	98	84.328	ENSHGLG00000019152	SMG5	99	83.996	Heterocephalus_glaber_female
ENSPTIG00000007892	SMG5	89	85.011	ENSHGLG00100015948	SMG5	97	85.794	Heterocephalus_glaber_male
ENSPTIG00000007892	SMG5	86	70.588	ENSHCOG00000010229	smg5	91	70.588	Hippocampus_comes
ENSPTIG00000007892	SMG5	98	58.614	ENSIPUG00000006624	Smg5	97	59.340	Ictalurus_punctatus
ENSPTIG00000007892	SMG5	98	86.221	ENSSTOG00000001780	SMG5	99	85.771	Ictidomys_tridecemlineatus
ENSPTIG00000007892	SMG5	98	82.828	ENSJJAG00000022763	Smg5	99	81.647	Jaculus_jaculus
ENSPTIG00000007892	SMG5	90	75.434	ENSKMAG00000014586	smg5	83	76.427	Kryptolebias_marmoratus
ENSPTIG00000007892	SMG5	95	64.520	ENSLBEG00000002145	smg5	93	64.369	Labrus_bergylta
ENSPTIG00000007892	SMG5	97	59.484	ENSLACG00000010521	SMG5	96	59.484	Latimeria_chalumnae
ENSPTIG00000007892	SMG5	93	76.543	ENSLOCG00000008380	smg5	89	77.078	Lepisosteus_oculatus
ENSPTIG00000007892	SMG5	96	87.747	ENSLAFG00000006241	SMG5	96	86.952	Loxodonta_africana
ENSPTIG00000007892	SMG5	98	85.526	ENSMFAG00000045357	SMG5	99	85.572	Macaca_fascicularis
ENSPTIG00000007892	SMG5	98	85.526	ENSMMUG00000000090	SMG5	99	85.572	Macaca_mulatta
ENSPTIG00000007892	SMG5	98	85.425	ENSMNEG00000044425	SMG5	99	85.473	Macaca_nemestrina
ENSPTIG00000007892	SMG5	98	79.133	ENSMLEG00000041192	SMG5	99	79.286	Mandrillus_leucophaeus
ENSPTIG00000007892	SMG5	98	56.737	ENSMAMG00000010683	smg5	99	56.274	Mastacembelus_armatus
ENSPTIG00000007892	SMG5	95	61.538	ENSMZEG00005015815	smg5	93	62.165	Maylandia_zebra
ENSPTIG00000007892	SMG5	62	54.375	ENSMZEG00005016543	smg5	99	54.375	Maylandia_zebra
ENSPTIG00000007892	SMG5	99	81.151	ENSMAUG00000010381	Smg5	99	81.033	Mesocricetus_auratus
ENSPTIG00000007892	SMG5	98	85.729	ENSMICG00000002257	SMG5	99	85.871	Microcebus_murinus
ENSPTIG00000007892	SMG5	98	81.754	ENSMOCG00000016590	Smg5	99	80.853	Microtus_ochrogaster
ENSPTIG00000007892	SMG5	98	54.346	ENSMMOG00000017199	smg5	97	56.239	Mola_mola
ENSPTIG00000007892	SMG5	98	31.328	ENSMODG00000004735	-	80	37.654	Monodelphis_domestica
ENSPTIG00000007892	SMG5	86	81.671	ENSMODG00000016901	SMG5	95	82.483	Monodelphis_domestica
ENSPTIG00000007892	SMG5	88	34.769	ENSMODG00000004532	-	76	37.306	Monodelphis_domestica
ENSPTIG00000007892	SMG5	73	35.474	ENSMODG00000010675	-	78	35.714	Monodelphis_domestica
ENSPTIG00000007892	SMG5	98	56.606	ENSMALG00000010375	smg5	97	56.382	Monopterus_albus
ENSPTIG00000007892	SMG5	98	83.401	MGP_CAROLIEiJ_G0025163	Smg5	100	93.296	Mus_caroli
ENSPTIG00000007892	SMG5	98	83.603	ENSMUSG00000001415	Smg5	99	93.296	Mus_musculus
ENSPTIG00000007892	SMG5	98	83.030	MGP_PahariEiJ_G0026606	Smg5	100	93.296	Mus_pahari
ENSPTIG00000007892	SMG5	98	83.401	MGP_SPRETEiJ_G0026104	Smg5	100	93.296	Mus_spretus
ENSPTIG00000007892	SMG5	92	88.659	ENSMPUG00000004546	SMG5	99	88.021	Mustela_putorius_furo
ENSPTIG00000007892	SMG5	96	86.335	ENSMLUG00000008518	SMG5	96	85.845	Myotis_lucifugus
ENSPTIG00000007892	SMG5	98	41.607	ENSNGAG00000012101	-	96	41.939	Nannospalax_galili
ENSPTIG00000007892	SMG5	98	83.690	ENSNGAG00000020706	Smg5	96	84.608	Nannospalax_galili
ENSPTIG00000007892	SMG5	96	59.813	ENSNBRG00000004332	smg5	96	60.847	Neolamprologus_brichardi
ENSPTIG00000007892	SMG5	98	85.223	ENSNLEG00000012439	SMG5	99	85.373	Nomascus_leucogenys
ENSPTIG00000007892	SMG5	98	80.000	ENSMEUG00000012834	SMG5	96	80.714	Notamacropus_eugenii
ENSPTIG00000007892	SMG5	98	84.600	ENSOPRG00000009152	SMG5	99	83.566	Ochotona_princeps
ENSPTIG00000007892	SMG5	98	85.061	ENSODEG00000012237	SMG5	99	85.075	Octodon_degus
ENSPTIG00000007892	SMG5	98	56.375	ENSONIG00000008632	smg5	90	76.427	Oreochromis_niloticus
ENSPTIG00000007892	SMG5	89	38.170	ENSOCUG00000023338	-	97	37.054	Oryctolagus_cuniculus
ENSPTIG00000007892	SMG5	96	86.916	ENSOCUG00000012886	SMG5	99	86.646	Oryctolagus_cuniculus
ENSPTIG00000007892	SMG5	90	74.690	ENSORLG00020013127	smg5	94	62.815	Oryzias_latipes_hni
ENSPTIG00000007892	SMG5	87	74.690	ENSORLG00015019014	smg5	93	63.175	Oryzias_latipes_hsok
ENSPTIG00000007892	SMG5	72	75.682	ENSOMEG00000021330	smg5	90	56.154	Oryzias_melastigma
ENSPTIG00000007892	SMG5	98	85.223	ENSOGAG00000004966	SMG5	99	84.921	Otolemur_garnettii
ENSPTIG00000007892	SMG5	98	41.481	ENSOARG00000011963	-	97	41.153	Ovis_aries
ENSPTIG00000007892	SMG5	98	86.235	ENSOARG00000005778	SMG5	99	85.572	Ovis_aries
ENSPTIG00000007892	SMG5	98	85.324	ENSPPAG00000011996	SMG5	99	85.473	Pan_paniscus
ENSPTIG00000007892	SMG5	96	93.111	ENSPPRG00000011901	SMG5	99	92.418	Panthera_pardus
ENSPTIG00000007892	SMG5	98	85.526	ENSPTRG00000049282	-	99	85.672	Pan_troglodytes
ENSPTIG00000007892	SMG5	98	85.526	ENSPTRG00000023925	SMG5	99	85.672	Pan_troglodytes
ENSPTIG00000007892	SMG5	98	85.628	ENSPANG00000011201	SMG5	99	85.672	Papio_anubis
ENSPTIG00000007892	SMG5	95	62.998	ENSPKIG00000009402	smg5	97	62.107	Paramormyrops_kingsleyae
ENSPTIG00000007892	SMG5	96	74.490	ENSPSIG00000015198	SMG5	99	73.774	Pelodiscus_sinensis
ENSPTIG00000007892	SMG5	98	56.964	ENSPMGG00000010465	smg5	97	56.731	Periophthalmus_magnuspinnatus
ENSPTIG00000007892	SMG5	98	83.013	ENSPEMG00000001819	Smg5	99	81.891	Peromyscus_maniculatus_bairdii
ENSPTIG00000007892	SMG5	58	44.840	ENSPEMG00000010022	-	94	43.630	Peromyscus_maniculatus_bairdii
ENSPTIG00000007892	SMG5	98	47.198	ENSPMAG00000000410	smg5	97	47.796	Petromyzon_marinus
ENSPTIG00000007892	SMG5	98	81.142	ENSPCIG00000018938	SMG5	96	81.753	Phascolarctos_cinereus
ENSPTIG00000007892	SMG5	92	73.206	ENSPFOG00000010191	smg5	97	58.287	Poecilia_formosa
ENSPTIG00000007892	SMG5	92	73.206	ENSPLAG00000009332	smg5	97	58.379	Poecilia_latipinna
ENSPTIG00000007892	SMG5	92	73.206	ENSPMEG00000014105	smg5	97	62.363	Poecilia_mexicana
ENSPTIG00000007892	SMG5	92	73.206	ENSPREG00000017713	smg5	97	58.103	Poecilia_reticulata
ENSPTIG00000007892	SMG5	98	85.628	ENSPPYG00000000723	SMG5	99	85.771	Pongo_abelii
ENSPTIG00000007892	SMG5	76	93.855	ENSPCAG00000008412	SMG5	81	93.855	Procavia_capensis
ENSPTIG00000007892	SMG5	98	85.613	ENSPCOG00000004741	SMG5	99	85.871	Propithecus_coquereli
ENSPTIG00000007892	SMG5	98	78.186	ENSPVAG00000016748	SMG5	96	78.367	Pteropus_vampyrus
ENSPTIG00000007892	SMG5	98	55.989	ENSPNYG00000013397	smg5	90	76.011	Pundamilia_nyererei
ENSPTIG00000007892	SMG5	98	58.801	ENSPNAG00000028363	smg5	97	58.271	Pygocentrus_nattereri
ENSPTIG00000007892	SMG5	98	83.822	ENSRNOG00000019590	Smg5	99	82.488	Rattus_norvegicus
ENSPTIG00000007892	SMG5	98	85.729	ENSRBIG00000027428	SMG5	99	85.657	Rhinopithecus_bieti
ENSPTIG00000007892	SMG5	98	85.628	ENSRROG00000030035	SMG5	99	85.558	Rhinopithecus_roxellana
ENSPTIG00000007892	SMG5	98	85.628	ENSSBOG00000033339	SMG5	99	85.771	Saimiri_boliviensis_boliviensis
ENSPTIG00000007892	SMG5	62	40.000	ENSSHAG00000000935	-	76	39.535	Sarcophilus_harrisii
ENSPTIG00000007892	SMG5	51	36.072	ENSSHAG00000000561	-	97	34.067	Sarcophilus_harrisii
ENSPTIG00000007892	SMG5	96	33.088	ENSSHAG00000009572	-	93	31.847	Sarcophilus_harrisii
ENSPTIG00000007892	SMG5	98	80.750	ENSSHAG00000014163	SMG5	99	81.440	Sarcophilus_harrisii
ENSPTIG00000007892	SMG5	98	62.195	ENSSFOG00015024175	smg5	97	62.602	Scleropages_formosus
ENSPTIG00000007892	SMG5	98	56.216	ENSSMAG00000013059	smg5	90	75.931	Scophthalmus_maximus
ENSPTIG00000007892	SMG5	95	57.022	ENSSDUG00000007122	smg5	97	56.506	Seriola_dumerili
ENSPTIG00000007892	SMG5	94	59.627	ENSSLDG00000011418	smg5	95	59.625	Seriola_lalandi_dorsalis
ENSPTIG00000007892	SMG5	86	89.558	ENSSARG00000012484	SMG5	90	91.915	Sorex_araneus
ENSPTIG00000007892	SMG5	94	70.859	ENSSPUG00000002260	SMG5	99	71.370	Sphenodon_punctatus
ENSPTIG00000007892	SMG5	87	74.568	ENSSPAG00000014266	smg5	96	62.715	Stegastes_partitus
ENSPTIG00000007892	SMG5	96	89.108	ENSSSCG00000006490	-	99	87.872	Sus_scrofa
ENSPTIG00000007892	SMG5	94	70.833	ENSSSCG00000039308	-	96	69.102	Sus_scrofa
ENSPTIG00000007892	SMG5	98	73.562	ENSTGUG00000003748	-	97	73.562	Taeniopygia_guttata
ENSPTIG00000007892	SMG5	98	59.919	ENSTRUG00000012580	smg5	97	59.880	Takifugu_rubripes
ENSPTIG00000007892	SMG5	98	60.000	ENSTNIG00000010303	smg5	97	59.600	Tetraodon_nigroviridis
ENSPTIG00000007892	SMG5	54	94.089	ENSTBEG00000002777	SMG5	51	94.089	Tupaia_belangeri
ENSPTIG00000007892	SMG5	93	86.037	ENSTTRG00000001401	SMG5	93	85.338	Tursiops_truncatus
ENSPTIG00000007892	SMG5	96	90.292	ENSUAMG00000013721	SMG5	96	89.549	Ursus_americanus
ENSPTIG00000007892	SMG5	97	84.776	ENSUMAG00000018041	SMG5	98	83.828	Ursus_maritimus
ENSPTIG00000007892	SMG5	96	79.543	ENSVPAG00000009446	SMG5	99	78.695	Vicugna_pacos
ENSPTIG00000007892	SMG5	99	88.188	ENSVVUG00000005887	SMG5	99	88.600	Vulpes_vulpes
ENSPTIG00000007892	SMG5	75	62.973	ENSXETG00000033791	SMG5	97	61.118	Xenopus_tropicalis
ENSPTIG00000007892	SMG5	70	72.727	ENSXCOG00000004379	smg5	93	66.474	Xiphophorus_couchianus
ENSPTIG00000007892	SMG5	92	72.488	ENSXMAG00000013499	smg5	97	62.550	Xiphophorus_maculatus