EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPTIG00000007898 (Gene tree)
Gene ID
102950241
Gene Symbol
RPA1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Panthera_tigris_altaica
Status
putative
Strand
Plus strand
Length
73811 bases
Position
chrKE721670.1:6870441-6944251
Accession
102950241
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTIP00000005778tRNA_anti-codonPF01336.251.2e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTIT00000009574RPA1-2012889XM_007076121ENSPTIP00000005778618 (aa)XP_007076183UPI00042BDCFD
Gene Model
Click here to download ENSPTIG00000007898's gene model file
Pathways
Pathway IDPathway NameSource
ptg03030DNA replicationKEGG
ptg03420Nucleotide excision repairKEGG
ptg03430Mismatch repairKEGG
ptg03440Homologous recombinationKEGG
ptg03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000007898's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTIG00000007898RPA19961.765ENSAPOG00000011658rpa19962.153Acanthochromis_polyacanthus
ENSPTIG00000007898RPA19063.554ENSAPOG00000019409RPA18763.554Acanthochromis_polyacanthus
ENSPTIG00000007898RPA19992.295ENSAMEG00000007706RPA19892.295Ailuropoda_melanoleuca
ENSPTIG00000007898RPA19558.136ENSACIG00000007277rpa19958.136Amphilophus_citrinellus
ENSPTIG00000007898RPA19559.865ENSACIG00000012881RPA19959.865Amphilophus_citrinellus
ENSPTIG00000007898RPA19962.418ENSAOCG00000023376rpa19962.418Amphiprion_ocellaris
ENSPTIG00000007898RPA19955.178ENSAOCG00000009003RPA19955.178Amphiprion_ocellaris
ENSPTIG00000007898RPA19962.255ENSAPEG00000008634rpa19962.255Amphiprion_percula
ENSPTIG00000007898RPA19953.394ENSAPEG00000019132RPA19954.230Amphiprion_percula
ENSPTIG00000007898RPA19954.977ENSATEG00000006443RPA19954.977Anabas_testudineus
ENSPTIG00000007898RPA19463.465ENSATEG00000022024rpa19963.465Anabas_testudineus
ENSPTIG00000007898RPA19765.192ENSAPLG00000012442RPA110065.192Anas_platyrhynchos
ENSPTIG00000007898RPA19962.219ENSACAG00000014490RPA19962.742Anolis_carolinensis
ENSPTIG00000007898RPA19886.755ENSANAG00000023456RPA110086.755Aotus_nancymaae
ENSPTIG00000007898RPA19959.561ENSACLG00000005223RPA19959.561Astatotilapia_calliptera
ENSPTIG00000007898RPA19364.174ENSACLG00000006640rpa19964.174Astatotilapia_calliptera
ENSPTIG00000007898RPA19962.276ENSAMXG00000008418rpa19962.276Astyanax_mexicanus
ENSPTIG00000007898RPA19989.465ENSBTAG00000009711RPA110089.465Bos_taurus
ENSPTIG00000007898RPA17830.864WBGene00017546rpa-17230.453Caenorhabditis_elegans
ENSPTIG00000007898RPA19987.034ENSCJAG00000001848RPA110087.034Callithrix_jacchus
ENSPTIG00000007898RPA19992.707ENSCAFG00000019249RPA110092.707Canis_familiaris
ENSPTIG00000007898RPA19992.707ENSCAFG00020009847RPA110092.707Canis_lupus_dingo
ENSPTIG00000007898RPA19988.979ENSCHIG00000026308RPA110088.979Capra_hircus
ENSPTIG00000007898RPA19988.997ENSTSYG00000003482-10088.997Carlito_syrichta
ENSPTIG00000007898RPA19984.927ENSCPOG00000000035RPA110084.927Cavia_porcellus
ENSPTIG00000007898RPA19976.935ENSCCAG00000010981RPA110076.935Cebus_capucinus
ENSPTIG00000007898RPA19986.667ENSCLAG00000005185-9986.667Chinchilla_lanigera
ENSPTIG00000007898RPA19982.496ENSCLAG00000015045-10082.496Chinchilla_lanigera
ENSPTIG00000007898RPA19975.968ENSCSAG00000013833RPA110076.812Chlorocebus_sabaeus
ENSPTIG00000007898RPA17191.344ENSCHOG00000009454-10091.344Choloepus_hoffmanni
ENSPTIG00000007898RPA19587.267ENSCHOG00000013540-10087.267Choloepus_hoffmanni
ENSPTIG00000007898RPA110076.861ENSCPBG00000020377RPA19977.312Chrysemys_picta_bellii
ENSPTIG00000007898RPA19941.503ENSCING00000023482-9841.503Ciona_intestinalis
ENSPTIG00000007898RPA19882.673ENSCANG00000030911RPA110082.673Colobus_angolensis_palliatus
ENSPTIG00000007898RPA19987.399ENSCGRG00001008197Rpa19987.399Cricetulus_griseus_chok1gshd
ENSPTIG00000007898RPA18186.417ENSCGRG00000000582Rpa19986.417Cricetulus_griseus_crigri
ENSPTIG00000007898RPA19959.738ENSCSEG00000013066rpa19959.738Cynoglossus_semilaevis
ENSPTIG00000007898RPA19952.244ENSCSEG00000012726RPA19853.436Cynoglossus_semilaevis
ENSPTIG00000007898RPA19963.132ENSCVAG00000019431rpa19963.351Cyprinodon_variegatus
ENSPTIG00000007898RPA19554.419ENSCVAG00000013446-9654.884Cyprinodon_variegatus
ENSPTIG00000007898RPA19962.114ENSDARG00000003938rpa19962.114Danio_rerio
ENSPTIG00000007898RPA19889.967ENSDNOG00000017218RPA19989.967Dasypus_novemcinctus
ENSPTIG00000007898RPA19988.331ENSDORG00000006199Rpa110088.331Dipodomys_ordii
ENSPTIG00000007898RPA19942.765FBgn0010173RpA-709843.087Drosophila_melanogaster
ENSPTIG00000007898RPA18383.092ENSETEG00000017608RPA18383.092Echinops_telfairi
ENSPTIG00000007898RPA19889.718ENSEASG00005009372RPA110087.903Equus_asinus_asinus
ENSPTIG00000007898RPA19990.762ENSECAG00000023886RPA110090.762Equus_caballus
ENSPTIG00000007898RPA16889.048ENSEEUG00000002186-6889.048Erinaceus_europaeus
ENSPTIG00000007898RPA18856.250ENSELUG00000006136RPA19956.250Esox_lucius
ENSPTIG00000007898RPA19960.390ENSELUG00000021071rpa19960.552Esox_lucius
ENSPTIG00000007898RPA110098.706ENSFCAG00000006306RPA110098.706Felis_catus
ENSPTIG00000007898RPA19974.194ENSFALG00000006575RPA19974.194Ficedula_albicollis
ENSPTIG00000007898RPA19987.805ENSFDAG00000007720RPA19987.805Fukomys_damarensis
ENSPTIG00000007898RPA19961.475ENSFHEG00000003580rpa19961.475Fundulus_heteroclitus
ENSPTIG00000007898RPA19958.007ENSGMOG00000010382rpa19958.007Gadus_morhua
ENSPTIG00000007898RPA19974.595ENSGALG00000003072RPA19974.595Gallus_gallus
ENSPTIG00000007898RPA19862.336ENSGAFG00000012916rpa19962.336Gambusia_affinis
ENSPTIG00000007898RPA19954.103ENSGAFG00000020953RPA19954.628Gambusia_affinis
ENSPTIG00000007898RPA19960.650ENSGACG00000010856rpa19960.650Gasterosteus_aculeatus
ENSPTIG00000007898RPA110076.861ENSGAGG00000013611RPA19976.861Gopherus_agassizii
ENSPTIG00000007898RPA19984.117ENSGGOG00000014186RPA110084.117Gorilla_gorilla
ENSPTIG00000007898RPA19655.000ENSHBUG00000009348RPA19955.000Haplochromis_burtoni
ENSPTIG00000007898RPA19963.399ENSHBUG00000017773rpa19963.399Haplochromis_burtoni
ENSPTIG00000007898RPA19987.967ENSHGLG00000008846RPA110087.967Heterocephalus_glaber_female
ENSPTIG00000007898RPA19987.967ENSHGLG00100017755-10087.967Heterocephalus_glaber_male
ENSPTIG00000007898RPA19982.982ENSHGLG00100000799-10082.982Heterocephalus_glaber_male
ENSPTIG00000007898RPA19974.554ENSHGLG00100002005-10074.554Heterocephalus_glaber_male
ENSPTIG00000007898RPA19944.498ENSHCOG00000000351RPA19844.498Hippocampus_comes
ENSPTIG00000007898RPA19959.380ENSHCOG00000001401rpa19960.359Hippocampus_comes
ENSPTIG00000007898RPA19962.013ENSIPUG00000004400rpa19962.013Ictalurus_punctatus
ENSPTIG00000007898RPA19881.117ENSSTOG00000022475RPA19881.117Ictidomys_tridecemlineatus
ENSPTIG00000007898RPA19587.946ENSJJAG00000000876Rpa19887.946Jaculus_jaculus
ENSPTIG00000007898RPA19860.294ENSKMAG00000005605rpa19960.948Kryptolebias_marmoratus
ENSPTIG00000007898RPA19955.323ENSKMAG00000000234RPA19955.323Kryptolebias_marmoratus
ENSPTIG00000007898RPA19862.896ENSLBEG00000002281RPA18662.896Labrus_bergylta
ENSPTIG00000007898RPA19961.928ENSLBEG00000021604rpa19961.928Labrus_bergylta
ENSPTIG00000007898RPA18164.741ENSLACG00000007210RPA19964.741Latimeria_chalumnae
ENSPTIG00000007898RPA19966.829ENSLOCG00000006397rpa19966.829Lepisosteus_oculatus
ENSPTIG00000007898RPA19987.279ENSLAFG00000015354RPA19987.279Loxodonta_africana
ENSPTIG00000007898RPA18286.982ENSMFAG00000036138-10087.992Macaca_fascicularis
ENSPTIG00000007898RPA19979.773ENSMMUG00000002442-10079.773Macaca_mulatta
ENSPTIG00000007898RPA19886.469ENSMMUG00000011604-10087.315Macaca_mulatta
ENSPTIG00000007898RPA19186.667ENSMNEG00000029837-10086.667Macaca_nemestrina
ENSPTIG00000007898RPA19983.306ENSMNEG00000031632-10084.142Macaca_nemestrina
ENSPTIG00000007898RPA19880.560ENSMLEG00000038768-10081.414Mandrillus_leucophaeus
ENSPTIG00000007898RPA19962.029ENSMAMG00000017993rpa19962.029Mastacembelus_armatus
ENSPTIG00000007898RPA19951.780ENSMAMG00000020097RPA19952.374Mastacembelus_armatus
ENSPTIG00000007898RPA19963.399ENSMZEG00005007551rpa19963.399Maylandia_zebra
ENSPTIG00000007898RPA19959.561ENSMZEG00005024731RPA19959.561Maylandia_zebra
ENSPTIG00000007898RPA19974.272ENSMGAG00000005315RPA19974.272Meleagris_gallopavo
ENSPTIG00000007898RPA19788.186ENSMAUG00000010474Rpa19988.186Mesocricetus_auratus
ENSPTIG00000007898RPA19988.493ENSMICG00000012867RPA110088.817Microcebus_murinus
ENSPTIG00000007898RPA19988.111ENSMOCG00000013019Rpa19988.111Microtus_ochrogaster
ENSPTIG00000007898RPA19961.111ENSMMOG00000014292rpa19962.395Mola_mola
ENSPTIG00000007898RPA19756.833ENSMMOG00000010868RPA19762.785Mola_mola
ENSPTIG00000007898RPA19983.902ENSMODG00000010549RPA19983.902Monodelphis_domestica
ENSPTIG00000007898RPA19963.218ENSMALG00000011453rpa19963.383Monopterus_albus
ENSPTIG00000007898RPA19463.122ENSMALG00000001208RPA18163.122Monopterus_albus
ENSPTIG00000007898RPA19987.682MGP_CAROLIEiJ_G0016734Rpa19987.682Mus_caroli
ENSPTIG00000007898RPA19985.072ENSMUSG00000000751Rpa19985.072Mus_musculus
ENSPTIG00000007898RPA19988.387MGP_PahariEiJ_G0017871Rpa19988.387Mus_pahari
ENSPTIG00000007898RPA19985.096MGP_SPRETEiJ_G0017577Rpa19985.096Mus_spretus
ENSPTIG00000007898RPA19993.031ENSMPUG00000013119RPA110093.031Mustela_putorius_furo
ENSPTIG00000007898RPA19986.495ENSMLUG00000006113RPA110086.495Myotis_lucifugus
ENSPTIG00000007898RPA19983.981ENSNGAG00000004522Rpa19783.981Nannospalax_galili
ENSPTIG00000007898RPA19657.119ENSNBRG00000009672RPA19557.119Neolamprologus_brichardi
ENSPTIG00000007898RPA19463.966ENSNBRG00000020595rpa19963.966Neolamprologus_brichardi
ENSPTIG00000007898RPA19986.548ENSNLEG00000017149RPA110087.217Nomascus_leucogenys
ENSPTIG00000007898RPA19872.803ENSMEUG00000006714RPA19972.803Notamacropus_eugenii
ENSPTIG00000007898RPA19980.990ENSODEG00000009038RPA110080.990Octodon_degus
ENSPTIG00000007898RPA19963.387ENSONIG00000013135rpa19963.387Oreochromis_niloticus
ENSPTIG00000007898RPA19882.838ENSOANG00000010880RPA19983.003Ornithorhynchus_anatinus
ENSPTIG00000007898RPA19984.080ENSOCUG00000001504RPA110084.080Oryctolagus_cuniculus
ENSPTIG00000007898RPA19961.601ENSORLG00000004856rpa19961.601Oryzias_latipes
ENSPTIG00000007898RPA19953.752ENSORLG00000003368RPA19953.752Oryzias_latipes
ENSPTIG00000007898RPA19961.601ENSORLG00020008980rpa19961.601Oryzias_latipes_hni
ENSPTIG00000007898RPA19952.331ENSORLG00020015284RPA19952.331Oryzias_latipes_hni
ENSPTIG00000007898RPA16862.530ENSORLG00015005867-9562.530Oryzias_latipes_hsok
ENSPTIG00000007898RPA19954.134ENSORLG00015020383RPA19954.134Oryzias_latipes_hsok
ENSPTIG00000007898RPA19961.601ENSORLG00015013982rpa19961.601Oryzias_latipes_hsok
ENSPTIG00000007898RPA19959.869ENSOMEG00000004704rpa19959.869Oryzias_melastigma
ENSPTIG00000007898RPA19953.748ENSOMEG00000011040RPA19957.850Oryzias_melastigma
ENSPTIG00000007898RPA19486.014ENSOGAG00000029379-10088.360Otolemur_garnettii
ENSPTIG00000007898RPA19987.682ENSOGAG00000005581-10087.682Otolemur_garnettii
ENSPTIG00000007898RPA19988.979ENSOARG00000014479RPA110088.979Ovis_aries
ENSPTIG00000007898RPA19986.548ENSPPAG00000039680RPA110087.217Pan_paniscus
ENSPTIG00000007898RPA110099.515ENSPPRG00000011807RPA110099.515Panthera_pardus
ENSPTIG00000007898RPA19986.548ENSPTRG00000008539RPA110087.217Pan_troglodytes
ENSPTIG00000007898RPA19986.386ENSPANG00000024592RPA110087.217Papio_anubis
ENSPTIG00000007898RPA19461.473ENSPKIG00000008053rpa19462.564Paramormyrops_kingsleyae
ENSPTIG00000007898RPA19876.119ENSPSIG00000015617RPA19976.119Pelodiscus_sinensis
ENSPTIG00000007898RPA19861.258ENSPMGG00000011589rpa19961.424Periophthalmus_magnuspinnatus
ENSPTIG00000007898RPA19953.312ENSPMGG00000000543RPA19956.437Periophthalmus_magnuspinnatus
ENSPTIG00000007898RPA19988.762ENSPEMG00000021061Rpa19988.762Peromyscus_maniculatus_bairdii
ENSPTIG00000007898RPA19981.656ENSPCIG00000019049RPA19982.305Phascolarctos_cinereus
ENSPTIG00000007898RPA19962.316ENSPFOG00000003987rpa19962.316Poecilia_formosa
ENSPTIG00000007898RPA19454.254ENSPLAG00000008844-9754.254Poecilia_latipinna
ENSPTIG00000007898RPA19961.990ENSPLAG00000004984rpa19961.990Poecilia_latipinna
ENSPTIG00000007898RPA19453.760ENSPMEG00000003627-9755.217Poecilia_mexicana
ENSPTIG00000007898RPA19962.480ENSPMEG00000020602rpa19962.957Poecilia_mexicana
ENSPTIG00000007898RPA19156.762ENSPREG00000010174rpa19555.789Poecilia_reticulata
ENSPTIG00000007898RPA19263.982ENSPREG00000010119RPA110051.548Poecilia_reticulata
ENSPTIG00000007898RPA19989.141ENSPCOG00000001799RPA110089.141Propithecus_coquereli
ENSPTIG00000007898RPA19990.762ENSPVAG00000002149RPA110090.762Pteropus_vampyrus
ENSPTIG00000007898RPA19963.562ENSPNYG00000016316rpa19964.125Pundamilia_nyererei
ENSPTIG00000007898RPA19959.248ENSPNYG00000024165RPA19959.248Pundamilia_nyererei
ENSPTIG00000007898RPA19754.561ENSPNAG00000008599rpa19655.461Pygocentrus_nattereri
ENSPTIG00000007898RPA19987.948ENSRNOG00000003123Rpa19987.948Rattus_norvegicus
ENSPTIG00000007898RPA19986.084ENSRBIG00000036587RPA110086.084Rhinopithecus_bieti
ENSPTIG00000007898RPA19981.392ENSRROG00000043278RPA110081.392Rhinopithecus_roxellana
ENSPTIG00000007898RPA19732.190YAR007CRFA19732.190Saccharomyces_cerevisiae
ENSPTIG00000007898RPA19882.975ENSSBOG00000030233RPA19982.975Saimiri_boliviensis_boliviensis
ENSPTIG00000007898RPA19983.961ENSSHAG00000007969RPA19884.288Sarcophilus_harrisii
ENSPTIG00000007898RPA19964.437ENSSFOG00015005362rpa19264.437Scleropages_formosus
ENSPTIG00000007898RPA19953.414ENSSMAG00000019746RPA19953.323Scophthalmus_maximus
ENSPTIG00000007898RPA19952.802ENSSDUG00000016358RPA19953.097Seriola_dumerili
ENSPTIG00000007898RPA19963.681ENSSDUG00000011949rpa19963.681Seriola_dumerili
ENSPTIG00000007898RPA19963.844ENSSLDG00000011806rpa19963.844Seriola_lalandi_dorsalis
ENSPTIG00000007898RPA18865.581ENSSLDG00000020784RPA19952.276Seriola_lalandi_dorsalis
ENSPTIG00000007898RPA19869.802ENSSARG00000007506RPA110069.802Sorex_araneus
ENSPTIG00000007898RPA19772.454ENSSPUG00000007223RPA19972.454Sphenodon_punctatus
ENSPTIG00000007898RPA19962.848ENSSPAG00000009903rpa19962.848Stegastes_partitus
ENSPTIG00000007898RPA19658.754ENSSPAG00000011165RPA19758.277Stegastes_partitus
ENSPTIG00000007898RPA19889.238ENSSSCG00000017822RPA110089.238Sus_scrofa
ENSPTIG00000007898RPA19974.110ENSTGUG00000005775RPA19974.110Taeniopygia_guttata
ENSPTIG00000007898RPA19063.934ENSTRUG00000000405RPA17963.014Takifugu_rubripes
ENSPTIG00000007898RPA19963.547ENSTRUG00000003616rpa19963.547Takifugu_rubripes
ENSPTIG00000007898RPA19964.286ENSTNIG00000016199rpa19964.286Tetraodon_nigroviridis
ENSPTIG00000007898RPA18797.674ENSTBEG00000002709RPA18997.674Tupaia_belangeri
ENSPTIG00000007898RPA110088.188ENSTTRG00000001169RPA110088.188Tursiops_truncatus
ENSPTIG00000007898RPA18898.077ENSUAMG00000015676RPA19798.077Ursus_americanus
ENSPTIG00000007898RPA19993.031ENSUMAG00000009328RPA110093.031Ursus_maritimus
ENSPTIG00000007898RPA19987.358ENSVPAG00000009443RPA110087.358Vicugna_pacos
ENSPTIG00000007898RPA19993.031ENSVVUG00000021715RPA110093.031Vulpes_vulpes
ENSPTIG00000007898RPA19972.013ENSXETG00000013538rpa19972.876Xenopus_tropicalis
ENSPTIG00000007898RPA19161.032ENSXCOG00000010068rpa19461.041Xiphophorus_couchianus
ENSPTIG00000007898RPA19556.655ENSXCOG00000009899-9956.655Xiphophorus_couchianus
ENSPTIG00000007898RPA19961.011ENSXMAG00000004102rpa19962.456Xiphophorus_maculatus
ENSPTIG00000007898RPA19263.982ENSXMAG00000010333RPA18663.982Xiphophorus_maculatus

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