EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000008454 (Gene tree)
Gene ID: 102958326
Gene Symbol: DDX50
Alias: -
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 32072 bases
Position: chrKE722181.1:11625675-11657746
Accession: 102958326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000006607	GUCT	PF08152.12	5.3e-28	1	1
ENSPTIP00000006597	GUCT	PF08152.12	6.4e-28	1	1
ENSPTIP00000006607	ResIII	PF04851.15	3.1e-10	1	1
ENSPTIP00000006597	ResIII	PF04851.15	3.4e-10	1	1
ENSPTIP00000006607	DEAD	PF00270.29	1.5e-47	1	1
ENSPTIP00000006597	DEAD	PF00270.29	1.6e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000010420	DDX50-201	2547	XM_007095751	ENSPTIP00000006597	738 (aa)	XP_007095813	UPI0002AD3B5A
ENSPTIT00000010431	DDX50-202	2142	-	ENSPTIP00000006607	714 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000008454's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000008454's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000008454	DDX50	50	31.649	ENSPTIG00000016749	DDX3Y	52	33.523
ENSPTIG00000008454	DDX50	50	35.097	ENSPTIG00000017842	-	54	35.097
ENSPTIG00000008454	DDX50	50	32.603	ENSPTIG00000020225	DDX41	57	32.603
ENSPTIG00000008454	DDX50	51	31.536	ENSPTIG00000011207	EIF4A2	90	30.904
ENSPTIG00000008454	DDX50	51	33.243	ENSPTIG00000010353	DDX5	57	33.518
ENSPTIG00000008454	DDX50	51	32.533	ENSPTIG00000012373	-	89	32.533
ENSPTIG00000008454	DDX50	59	33.181	ENSPTIG00000004868	DDX18	62	33.181
ENSPTIG00000008454	DDX50	53	32.161	ENSPTIG00000019604	DDX47	77	33.152
ENSPTIG00000008454	DDX50	57	33.099	ENSPTIG00000011662	DDX27	52	32.864
ENSPTIG00000008454	DDX50	83	68.121	ENSPTIG00000007268	DDX21	75	68.197
ENSPTIG00000008454	DDX50	50	37.047	ENSPTIG00000001243	-	53	36.313
ENSPTIG00000008454	DDX50	50	31.649	ENSPTIG00000014814	DDX3X	53	33.239
ENSPTIG00000008454	DDX50	51	34.417	ENSPTIG00000008733	DDX17	75	33.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000008454	DDX50	100	98.238	ENSG00000107625	DDX50	100	98.238	Homo_sapiens
ENSPTIG00000008454	DDX50	100	98.780	ENSAMEG00000017992	DDX50	100	98.780	Ailuropoda_melanoleuca
ENSPTIG00000008454	DDX50	92	78.035	ENSANAG00000017785	-	91	78.035	Aotus_nancymaae
ENSPTIG00000008454	DDX50	100	97.832	ENSBTAG00000033413	DDX50	100	97.832	Bos_taurus
ENSPTIG00000008454	DDX50	100	98.374	ENSCJAG00000018844	DDX50	100	98.374	Callithrix_jacchus
ENSPTIG00000008454	DDX50	100	99.322	ENSCAFG00000013776	DDX50	100	99.322	Canis_familiaris
ENSPTIG00000008454	DDX50	100	99.322	ENSCAFG00020025977	DDX50	99	99.322	Canis_lupus_dingo
ENSPTIG00000008454	DDX50	100	97.561	ENSCHIG00000000285	DDX50	99	97.561	Capra_hircus
ENSPTIG00000008454	DDX50	100	97.561	ENSTSYG00000004192	DDX50	100	97.561	Carlito_syrichta
ENSPTIG00000008454	DDX50	93	80.060	ENSCAPG00000007230	-	90	80.060	Cavia_aperea
ENSPTIG00000008454	DDX50	100	96.341	ENSCPOG00000002131	-	100	96.341	Cavia_porcellus
ENSPTIG00000008454	DDX50	91	89.286	ENSCCAG00000030543	DDX50	100	89.286	Cebus_capucinus
ENSPTIG00000008454	DDX50	99	95.929	ENSCATG00000032463	DDX50	99	95.929	Cercocebus_atys
ENSPTIG00000008454	DDX50	99	66.532	ENSCATG00000039259	-	89	67.742	Cercocebus_atys
ENSPTIG00000008454	DDX50	98	72.476	ENSCATG00000035153	-	89	89.655	Cercocebus_atys
ENSPTIG00000008454	DDX50	97	71.108	ENSCLAG00000001938	-	91	71.865	Chinchilla_lanigera
ENSPTIG00000008454	DDX50	51	87.569	ENSCLAG00000001553	-	79	88.710	Chinchilla_lanigera
ENSPTIG00000008454	DDX50	100	97.696	ENSCLAG00000012957	-	100	97.696	Chinchilla_lanigera
ENSPTIG00000008454	DDX50	100	98.374	ENSCSAG00000007703	DDX50	100	98.374	Chlorocebus_sabaeus
ENSPTIG00000008454	DDX50	90	95.352	ENSCHOG00000000233	DDX50	100	95.352	Choloepus_hoffmanni
ENSPTIG00000008454	DDX50	100	84.417	ENSCANG00000036450	-	100	84.417	Colobus_angolensis_palliatus
ENSPTIG00000008454	DDX50	96	69.134	ENSCANG00000028077	-	91	68.567	Colobus_angolensis_palliatus
ENSPTIG00000008454	DDX50	88	72.364	ENSCANG00000018820	-	88	73.217	Colobus_angolensis_palliatus
ENSPTIG00000008454	DDX50	92	95.434	ENSCGRG00001020223	Ddx50	92	95.434	Cricetulus_griseus_chok1gshd
ENSPTIG00000008454	DDX50	92	95.562	ENSCGRG00000015884	Ddx50	92	95.434	Cricetulus_griseus_crigri
ENSPTIG00000008454	DDX50	88	89.985	ENSDNOG00000001675	DDX50	100	89.985	Dasypus_novemcinctus
ENSPTIG00000008454	DDX50	100	96.883	ENSDORG00000007310	Ddx50	100	96.883	Dipodomys_ordii
ENSPTIG00000008454	DDX50	90	97.566	ENSETEG00000014069	DDX50	90	97.566	Echinops_telfairi
ENSPTIG00000008454	DDX50	100	98.103	ENSEASG00005015595	DDX50	99	98.103	Equus_asinus_asinus
ENSPTIG00000008454	DDX50	100	98.238	ENSECAG00000023044	DDX50	99	98.238	Equus_caballus
ENSPTIG00000008454	DDX50	89	96.552	ENSEEUG00000005782	DDX50	84	96.602	Erinaceus_europaeus
ENSPTIG00000008454	DDX50	100	100.000	ENSFCAG00000012678	DDX50	99	100.000	Felis_catus
ENSPTIG00000008454	DDX50	92	89.396	ENSFDAG00000016109	-	91	89.396	Fukomys_damarensis
ENSPTIG00000008454	DDX50	100	98.238	ENSGGOG00000010100	DDX50	99	99.465	Gorilla_gorilla
ENSPTIG00000008454	DDX50	52	71.094	ENSGGOG00000022568	-	90	79.503	Gorilla_gorilla
ENSPTIG00000008454	DDX50	52	82.210	ENSGGOG00000041063	-	82	84.953	Gorilla_gorilla
ENSPTIG00000008454	DDX50	92	95.287	ENSHGLG00000013466	DDX50	92	95.287	Heterocephalus_glaber_female
ENSPTIG00000008454	DDX50	82	88.298	ENSHGLG00100006568	-	92	88.298	Heterocephalus_glaber_male
ENSPTIG00000008454	DDX50	92	95.287	ENSHGLG00100017191	DDX50	92	95.287	Heterocephalus_glaber_male
ENSPTIG00000008454	DDX50	100	95.535	ENSSTOG00000021852	-	100	95.264	Ictidomys_tridecemlineatus
ENSPTIG00000008454	DDX50	100	94.986	ENSJJAG00000023928	-	92	94.845	Jaculus_jaculus
ENSPTIG00000008454	DDX50	100	73.450	ENSJJAG00000019626	-	91	73.874	Jaculus_jaculus
ENSPTIG00000008454	DDX50	100	97.154	ENSLAFG00000006186	DDX50	100	97.154	Loxodonta_africana
ENSPTIG00000008454	DDX50	100	98.374	ENSMFAG00000044067	DDX50	100	98.374	Macaca_fascicularis
ENSPTIG00000008454	DDX50	98	71.784	ENSMFAG00000045339	-	89	88.715	Macaca_fascicularis
ENSPTIG00000008454	DDX50	93	65.165	ENSMMUG00000045343	-	88	65.663	Macaca_mulatta
ENSPTIG00000008454	DDX50	100	98.374	ENSMMUG00000001006	DDX50	100	99.108	Macaca_mulatta
ENSPTIG00000008454	DDX50	50	74.373	ENSMNEG00000034754	-	89	73.231	Macaca_nemestrina
ENSPTIG00000008454	DDX50	92	91.311	ENSMNEG00000031664	DDX50	92	91.311	Macaca_nemestrina
ENSPTIG00000008454	DDX50	98	73.003	ENSMNEG00000045530	-	89	89.969	Macaca_nemestrina
ENSPTIG00000008454	DDX50	86	84.112	ENSMLEG00000041988	-	89	87.597	Mandrillus_leucophaeus
ENSPTIG00000008454	DDX50	100	96.477	ENSMLEG00000037313	DDX50	100	96.477	Mandrillus_leucophaeus
ENSPTIG00000008454	DDX50	56	93.478	ENSMAUG00000022192	Ddx50	100	93.478	Mesocricetus_auratus
ENSPTIG00000008454	DDX50	100	90.379	ENSMICG00000017539	DDX50	100	90.379	Microcebus_murinus
ENSPTIG00000008454	DDX50	92	95.154	ENSMOCG00000001676	Ddx50	92	94.714	Microtus_ochrogaster
ENSPTIG00000008454	DDX50	92	80.381	ENSMODG00000010741	DDX50	92	80.786	Monodelphis_domestica
ENSPTIG00000008454	DDX50	93	95.802	MGP_CAROLIEiJ_G0015389	Ddx50	92	94.845	Mus_caroli
ENSPTIG00000008454	DDX50	92	94.551	ENSMUSG00000020076	Ddx50	92	95.140	Mus_musculus
ENSPTIG00000008454	DDX50	92	94.698	MGP_PahariEiJ_G0030805	Ddx50	92	95.287	Mus_pahari
ENSPTIG00000008454	DDX50	92	94.551	MGP_SPRETEiJ_G0016200	Ddx50	92	95.140	Mus_spretus
ENSPTIG00000008454	DDX50	88	98.611	ENSMPUG00000004589	DDX50	99	98.611	Mustela_putorius_furo
ENSPTIG00000008454	DDX50	100	96.341	ENSMLUG00000017590	DDX50	100	96.341	Myotis_lucifugus
ENSPTIG00000008454	DDX50	100	96.477	ENSNGAG00000004283	Ddx50	100	96.477	Nannospalax_galili
ENSPTIG00000008454	DDX50	98	66.667	ENSNLEG00000035506	-	88	78.193	Nomascus_leucogenys
ENSPTIG00000008454	DDX50	100	98.238	ENSNLEG00000011631	DDX50	100	98.238	Nomascus_leucogenys
ENSPTIG00000008454	DDX50	92	93.962	ENSOPRG00000001619	DDX50	92	94.698	Ochotona_princeps
ENSPTIG00000008454	DDX50	100	96.477	ENSODEG00000014597	-	100	96.477	Octodon_degus
ENSPTIG00000008454	DDX50	98	62.291	ENSOANG00000004776	DDX50	76	72.027	Ornithorhynchus_anatinus
ENSPTIG00000008454	DDX50	95	94.413	ENSOCUG00000002879	DDX50	95	95.876	Oryctolagus_cuniculus
ENSPTIG00000008454	DDX50	100	97.832	ENSOGAG00000001844	DDX50	100	97.832	Otolemur_garnettii
ENSPTIG00000008454	DDX50	100	97.561	ENSOARG00000005264	DDX50	99	97.561	Ovis_aries
ENSPTIG00000008454	DDX50	51	71.053	ENSPPAG00000026788	-	89	79.560	Pan_paniscus
ENSPTIG00000008454	DDX50	50	82.778	ENSPPAG00000033902	-	87	84.013	Pan_paniscus
ENSPTIG00000008454	DDX50	100	98.103	ENSPPAG00000040723	DDX50	100	98.103	Pan_paniscus
ENSPTIG00000008454	DDX50	100	100.000	ENSPPRG00000015826	DDX50	100	100.000	Panthera_pardus
ENSPTIG00000008454	DDX50	51	71.053	ENSPTRG00000044913	-	99	72.105	Pan_troglodytes
ENSPTIG00000008454	DDX50	100	98.103	ENSPTRG00000002562	DDX50	100	98.103	Pan_troglodytes
ENSPTIG00000008454	DDX50	50	74.930	ENSPANG00000032548	-	89	73.846	Papio_anubis
ENSPTIG00000008454	DDX50	92	90.427	ENSPANG00000022143	-	92	90.427	Papio_anubis
ENSPTIG00000008454	DDX50	92	94.698	ENSPEMG00000020899	-	92	94.698	Peromyscus_maniculatus_bairdii
ENSPTIG00000008454	DDX50	92	80.176	ENSPCIG00000016036	DDX50	93	81.279	Phascolarctos_cinereus
ENSPTIG00000008454	DDX50	93	98.949	ENSPPYG00000002390	DDX50	100	98.960	Pongo_abelii
ENSPTIG00000008454	DDX50	84	83.144	ENSPCAG00000009692	DDX50	100	83.144	Procavia_capensis
ENSPTIG00000008454	DDX50	88	89.189	ENSPCOG00000012574	DDX50	98	89.189	Propithecus_coquereli
ENSPTIG00000008454	DDX50	86	96.429	ENSPVAG00000009519	DDX50	86	96.429	Pteropus_vampyrus
ENSPTIG00000008454	DDX50	92	93.962	ENSRNOG00000000396	Ddx50	98	98.396	Rattus_norvegicus
ENSPTIG00000008454	DDX50	87	96.584	ENSRBIG00000042841	-	98	98.456	Rhinopithecus_bieti
ENSPTIG00000008454	DDX50	99	67.984	ENSRBIG00000036573	-	92	68.000	Rhinopithecus_bieti
ENSPTIG00000008454	DDX50	99	67.297	ENSRBIG00000039673	-	90	66.422	Rhinopithecus_bieti
ENSPTIG00000008454	DDX50	100	98.103	ENSRROG00000032158	DDX50	100	98.665	Rhinopithecus_roxellana
ENSPTIG00000008454	DDX50	53	71.883	ENSRROG00000031940	-	87	75.077	Rhinopithecus_roxellana
ENSPTIG00000008454	DDX50	99	65.400	ENSRROG00000022853	-	91	64.845	Rhinopithecus_roxellana
ENSPTIG00000008454	DDX50	100	87.534	ENSSBOG00000014441	DDX50	100	87.534	Saimiri_boliviensis_boliviensis
ENSPTIG00000008454	DDX50	82	67.839	ENSSHAG00000005334	-	85	64.651	Sarcophilus_harrisii
ENSPTIG00000008454	DDX50	88	81.184	ENSSHAG00000005690	DDX50	91	81.241	Sarcophilus_harrisii
ENSPTIG00000008454	DDX50	100	80.623	ENSSARG00000013553	DDX50	88	88.390	Sorex_araneus
ENSPTIG00000008454	DDX50	100	97.290	ENSSSCG00000010246	DDX50	99	97.290	Sus_scrofa
ENSPTIG00000008454	DDX50	96	75.000	ENSTBEG00000001085	DDX50	92	74.669	Tupaia_belangeri
ENSPTIG00000008454	DDX50	100	91.734	ENSTTRG00000012408	DDX50	99	91.734	Tursiops_truncatus
ENSPTIG00000008454	DDX50	100	99.051	ENSUAMG00000010976	DDX50	100	99.051	Ursus_americanus
ENSPTIG00000008454	DDX50	100	99.051	ENSUMAG00000007726	DDX50	99	99.051	Ursus_maritimus
ENSPTIG00000008454	DDX50	100	97.832	ENSVPAG00000000626	DDX50	100	97.832	Vicugna_pacos
ENSPTIG00000008454	DDX50	82	93.698	ENSVVUG00000020366	DDX50	98	99.733	Vulpes_vulpes