EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000008545 (Gene tree)
Gene ID: 102949061
Gene Symbol: RPUSD1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 2720 bases
Position: chrKE722056.1:540096-542815
Accession: 102949061
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000006691	PseudoU_synth_2	PF00849.22	2.3e-25	1	1
ENSPTIP00000006710	PseudoU_synth_2	PF00849.22	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000010536	RPUSD1-202	396	-	ENSPTIP00000006710	132 (aa)	-	-
ENSPTIT00000010517	RPUSD1-201	1869	XM_007093665	ENSPTIP00000006691	327 (aa)	XP_007093727	UPI00042BE5D8

Gene Model

Click here to download ENSPTIG00000008545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000008545's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000008545	RPUSD1	99	82.443	ENSG00000007376	RPUSD1	100	85.714	Homo_sapiens
ENSPTIG00000008545	RPUSD1	77	74.257	ENSAPOG00000022221	rpusd1	98	58.553	Acanthochromis_polyacanthus
ENSPTIG00000008545	RPUSD1	92	90.397	ENSAMEG00000007461	RPUSD1	100	90.397	Ailuropoda_melanoleuca
ENSPTIG00000008545	RPUSD1	77	73.267	ENSACIG00000015863	rpusd1	99	58.442	Amphilophus_citrinellus
ENSPTIG00000008545	RPUSD1	77	74.257	ENSAOCG00000021975	rpusd1	96	57.980	Amphiprion_ocellaris
ENSPTIG00000008545	RPUSD1	77	74.257	ENSAPEG00000001316	rpusd1	96	58.306	Amphiprion_percula
ENSPTIG00000008545	RPUSD1	77	74.038	ENSATEG00000002984	rpusd1	99	58.117	Anabas_testudineus
ENSPTIG00000008545	RPUSD1	72	60.656	ENSAPLG00000012316	RPUSD1	100	60.656	Anas_platyrhynchos
ENSPTIG00000008545	RPUSD1	91	72.500	ENSACAG00000008953	RPUSD1	100	67.550	Anolis_carolinensis
ENSPTIG00000008545	RPUSD1	92	80.635	ENSANAG00000024709	RPUSD1	100	81.731	Aotus_nancymaae
ENSPTIG00000008545	RPUSD1	77	75.248	ENSACLG00000013692	rpusd1	99	58.900	Astatotilapia_calliptera
ENSPTIG00000008545	RPUSD1	91	59.333	ENSAMXG00000019802	rpusd1	100	59.333	Astyanax_mexicanus
ENSPTIG00000008545	RPUSD1	92	84.740	ENSBTAG00000000179	RPUSD1	100	85.390	Bos_taurus
ENSPTIG00000008545	RPUSD1	92	79.683	ENSCJAG00000012253	RPUSD1	100	81.410	Callithrix_jacchus
ENSPTIG00000008545	RPUSD1	92	92.053	ENSCAFG00000019614	RPUSD1	100	92.053	Canis_familiaris
ENSPTIG00000008545	RPUSD1	92	92.053	ENSCAFG00020008891	RPUSD1	100	92.053	Canis_lupus_dingo
ENSPTIG00000008545	RPUSD1	92	83.766	ENSCHIG00000012872	RPUSD1	100	84.416	Capra_hircus
ENSPTIG00000008545	RPUSD1	99	83.206	ENSTSYG00000036934	RPUSD1	100	83.206	Carlito_syrichta
ENSPTIG00000008545	RPUSD1	92	82.680	ENSCAPG00000014219	RPUSD1	100	82.680	Cavia_aperea
ENSPTIG00000008545	RPUSD1	92	82.680	ENSCPOG00000034604	RPUSD1	100	82.680	Cavia_porcellus
ENSPTIG00000008545	RPUSD1	92	80.317	ENSCCAG00000034385	RPUSD1	100	81.731	Cebus_capucinus
ENSPTIG00000008545	RPUSD1	99	83.206	ENSCATG00000042983	RPUSD1	100	83.206	Cercocebus_atys
ENSPTIG00000008545	RPUSD1	92	82.353	ENSCLAG00000013966	RPUSD1	100	82.353	Chinchilla_lanigera
ENSPTIG00000008545	RPUSD1	92	79.048	ENSCSAG00000012121	RPUSD1	100	80.449	Chlorocebus_sabaeus
ENSPTIG00000008545	RPUSD1	78	81.553	ENSCPBG00000021101	RPUSD1	99	65.246	Chrysemys_picta_bellii
ENSPTIG00000008545	RPUSD1	99	83.969	ENSCANG00000028576	RPUSD1	100	83.969	Colobus_angolensis_palliatus
ENSPTIG00000008545	RPUSD1	92	80.592	ENSCGRG00001014253	Rpusd1	100	80.592	Cricetulus_griseus_chok1gshd
ENSPTIG00000008545	RPUSD1	92	80.592	ENSCGRG00000017995	Rpusd1	100	80.592	Cricetulus_griseus_crigri
ENSPTIG00000008545	RPUSD1	78	71.845	ENSCSEG00000007648	-	100	72.816	Cynoglossus_semilaevis
ENSPTIG00000008545	RPUSD1	99	58.333	ENSCSEG00000018512	rpusd1	100	58.278	Cynoglossus_semilaevis
ENSPTIG00000008545	RPUSD1	91	57.947	ENSCVAG00000022746	rpusd1	99	57.947	Cyprinodon_variegatus
ENSPTIG00000008545	RPUSD1	83	72.477	ENSDARG00000060192	rpusd1	100	62.333	Danio_rerio
ENSPTIG00000008545	RPUSD1	92	79.233	ENSDNOG00000003721	RPUSD1	100	81.494	Dasypus_novemcinctus
ENSPTIG00000008545	RPUSD1	92	83.828	ENSDORG00000026656	Rpusd1	100	85.479	Dipodomys_ordii
ENSPTIG00000008545	RPUSD1	90	47.097	ENSEBUG00000008767	rpusd1	93	47.097	Eptatretus_burgeri
ENSPTIG00000008545	RPUSD1	95	81.155	ENSEASG00005018421	RPUSD1	78	81.902	Equus_asinus_asinus
ENSPTIG00000008545	RPUSD1	77	73.529	ENSELUG00000014307	rpusd1	91	53.822	Esox_lucius
ENSPTIG00000008545	RPUSD1	100	99.242	ENSFCAG00000010359	RPUSD1	100	99.338	Felis_catus
ENSPTIG00000008545	RPUSD1	91	75.833	ENSFALG00000003211	RPUSD1	100	66.225	Ficedula_albicollis
ENSPTIG00000008545	RPUSD1	92	82.026	ENSFDAG00000013398	RPUSD1	100	82.026	Fukomys_damarensis
ENSPTIG00000008545	RPUSD1	77	72.277	ENSFHEG00000004736	rpusd1	99	57.049	Fundulus_heteroclitus
ENSPTIG00000008545	RPUSD1	77	75.248	ENSGMOG00000010756	rpusd1	99	55.700	Gadus_morhua
ENSPTIG00000008545	RPUSD1	78	80.583	ENSGALG00000005315	RPUSD1	100	64.935	Gallus_gallus
ENSPTIG00000008545	RPUSD1	77	73.267	ENSGAFG00000009886	rpusd1	99	57.947	Gambusia_affinis
ENSPTIG00000008545	RPUSD1	95	59.712	ENSGACG00000014276	rpusd1	97	58.472	Gasterosteus_aculeatus
ENSPTIG00000008545	RPUSD1	78	81.553	ENSGAGG00000004181	RPUSD1	99	65.246	Gopherus_agassizii
ENSPTIG00000008545	RPUSD1	99	82.443	ENSGGOG00000013997	RPUSD1	100	82.443	Gorilla_gorilla
ENSPTIG00000008545	RPUSD1	77	74.257	ENSHBUG00000023728	rpusd1	99	58.576	Haplochromis_burtoni
ENSPTIG00000008545	RPUSD1	92	82.026	ENSHGLG00000002595	RPUSD1	100	82.026	Heterocephalus_glaber_female
ENSPTIG00000008545	RPUSD1	92	82.026	ENSHGLG00100014303	RPUSD1	100	82.026	Heterocephalus_glaber_male
ENSPTIG00000008545	RPUSD1	78	75.728	ENSHCOG00000020005	-	97	76.699	Hippocampus_comes
ENSPTIG00000008545	RPUSD1	78	75.728	ENSHCOG00000002390	rpusd1	99	57.912	Hippocampus_comes
ENSPTIG00000008545	RPUSD1	78	73.786	ENSIPUG00000001570	rpusd1	99	60.726	Ictalurus_punctatus
ENSPTIG00000008545	RPUSD1	92	83.007	ENSSTOG00000004276	RPUSD1	100	83.007	Ictidomys_tridecemlineatus
ENSPTIG00000008545	RPUSD1	92	81.877	ENSJJAG00000015696	Rpusd1	100	82.353	Jaculus_jaculus
ENSPTIG00000008545	RPUSD1	89	57.095	ENSKMAG00000017287	rpusd1	96	58.108	Kryptolebias_marmoratus
ENSPTIG00000008545	RPUSD1	74	75.510	ENSLBEG00000013354	RPUSD1	96	57.143	Labrus_bergylta
ENSPTIG00000008545	RPUSD1	74	75.510	ENSLBEG00000022502	rpusd1	96	57.143	Labrus_bergylta
ENSPTIG00000008545	RPUSD1	91	61.258	ENSLACG00000008869	RPUSD1	99	61.258	Latimeria_chalumnae
ENSPTIG00000008545	RPUSD1	91	69.167	ENSLOCG00000005682	rpusd1	99	73.059	Lepisosteus_oculatus
ENSPTIG00000008545	RPUSD1	92	80.464	ENSLAFG00000002115	RPUSD1	100	80.464	Loxodonta_africana
ENSPTIG00000008545	RPUSD1	99	83.206	ENSMFAG00000003961	RPUSD1	100	83.206	Macaca_fascicularis
ENSPTIG00000008545	RPUSD1	99	83.206	ENSMMUG00000000842	RPUSD1	100	83.206	Macaca_mulatta
ENSPTIG00000008545	RPUSD1	99	83.206	ENSMNEG00000042712	RPUSD1	100	83.206	Macaca_nemestrina
ENSPTIG00000008545	RPUSD1	99	83.206	ENSMLEG00000030591	RPUSD1	100	83.206	Mandrillus_leucophaeus
ENSPTIG00000008545	RPUSD1	77	74.510	ENSMAMG00000004735	rpusd1	98	59.416	Mastacembelus_armatus
ENSPTIG00000008545	RPUSD1	77	75.248	ENSMZEG00005003214	rpusd1	99	58.900	Maylandia_zebra
ENSPTIG00000008545	RPUSD1	73	83.333	ENSMGAG00000005447	RPUSD1	99	65.116	Meleagris_gallopavo
ENSPTIG00000008545	RPUSD1	91	78.333	ENSMAUG00000019998	Rpusd1	100	75.188	Mesocricetus_auratus
ENSPTIG00000008545	RPUSD1	99	83.969	ENSMICG00000017561	RPUSD1	100	84.039	Microcebus_murinus
ENSPTIG00000008545	RPUSD1	92	80.583	ENSMOCG00000014082	Rpusd1	100	81.373	Microtus_ochrogaster
ENSPTIG00000008545	RPUSD1	82	70.370	ENSMMOG00000012569	rpusd1	99	56.757	Mola_mola
ENSPTIG00000008545	RPUSD1	84	80.180	ENSMODG00000016882	RPUSD1	100	70.550	Monodelphis_domestica
ENSPTIG00000008545	RPUSD1	77	75.248	ENSMALG00000017818	rpusd1	98	58.442	Monopterus_albus
ENSPTIG00000008545	RPUSD1	92	82.201	MGP_CAROLIEiJ_G0021244	Rpusd1	100	83.007	Mus_caroli
ENSPTIG00000008545	RPUSD1	92	82.201	ENSMUSG00000041199	Rpusd1	100	83.007	Mus_musculus
ENSPTIG00000008545	RPUSD1	92	81.169	MGP_PahariEiJ_G0023562	Rpusd1	100	81.494	Mus_pahari
ENSPTIG00000008545	RPUSD1	92	82.201	MGP_SPRETEiJ_G0022155	Rpusd1	100	83.007	Mus_spretus
ENSPTIG00000008545	RPUSD1	92	90.066	ENSMPUG00000015897	RPUSD1	100	90.066	Mustela_putorius_furo
ENSPTIG00000008545	RPUSD1	92	82.540	ENSMLUG00000001089	RPUSD1	100	84.566	Myotis_lucifugus
ENSPTIG00000008545	RPUSD1	92	81.230	ENSNGAG00000003595	Rpusd1	100	81.699	Nannospalax_galili
ENSPTIG00000008545	RPUSD1	77	74.257	ENSNBRG00000006457	rpusd1	99	59.933	Neolamprologus_brichardi
ENSPTIG00000008545	RPUSD1	50	75.281	ENSNLEG00000008424	-	100	77.714	Nomascus_leucogenys
ENSPTIG00000008545	RPUSD1	92	71.053	ENSMEUG00000016049	RPUSD1	100	71.053	Notamacropus_eugenii
ENSPTIG00000008545	RPUSD1	92	77.000	ENSOPRG00000008340	RPUSD1	99	77.000	Ochotona_princeps
ENSPTIG00000008545	RPUSD1	92	81.373	ENSODEG00000016945	RPUSD1	100	81.373	Octodon_degus
ENSPTIG00000008545	RPUSD1	77	74.257	ENSONIG00000015672	rpusd1	99	58.252	Oreochromis_niloticus
ENSPTIG00000008545	RPUSD1	81	72.897	ENSOANG00000030625	-	81	73.148	Ornithorhynchus_anatinus
ENSPTIG00000008545	RPUSD1	83	67.273	ENSORLG00000013009	rpusd1	99	57.705	Oryzias_latipes
ENSPTIG00000008545	RPUSD1	92	57.377	ENSORLG00020010382	rpusd1	99	57.377	Oryzias_latipes_hni
ENSPTIG00000008545	RPUSD1	92	57.049	ENSORLG00015021354	rpusd1	99	57.049	Oryzias_latipes_hsok
ENSPTIG00000008545	RPUSD1	98	60.000	ENSOMEG00000021426	rpusd1	98	58.000	Oryzias_melastigma
ENSPTIG00000008545	RPUSD1	92	82.540	ENSOGAG00000003795	RPUSD1	100	83.333	Otolemur_garnettii
ENSPTIG00000008545	RPUSD1	92	83.766	ENSOARG00000014254	RPUSD1	100	84.091	Ovis_aries
ENSPTIG00000008545	RPUSD1	99	81.679	ENSPPAG00000034797	RPUSD1	100	81.731	Pan_paniscus
ENSPTIG00000008545	RPUSD1	100	100.000	ENSPPRG00000012389	RPUSD1	100	100.000	Panthera_pardus
ENSPTIG00000008545	RPUSD1	99	81.679	ENSPTRG00000007565	RPUSD1	100	81.731	Pan_troglodytes
ENSPTIG00000008545	RPUSD1	99	82.443	ENSPANG00000024401	RPUSD1	100	82.443	Papio_anubis
ENSPTIG00000008545	RPUSD1	78	77.670	ENSPKIG00000018890	rpusd1	93	60.703	Paramormyrops_kingsleyae
ENSPTIG00000008545	RPUSD1	78	81.553	ENSPSIG00000013945	RPUSD1	100	65.902	Pelodiscus_sinensis
ENSPTIG00000008545	RPUSD1	77	71.287	ENSPMGG00000014950	rpusd1	98	57.239	Periophthalmus_magnuspinnatus
ENSPTIG00000008545	RPUSD1	92	80.583	ENSPEMG00000000497	Rpusd1	100	81.373	Peromyscus_maniculatus_bairdii
ENSPTIG00000008545	RPUSD1	99	50.685	ENSPMAG00000001563	rpusd1	99	54.754	Petromyzon_marinus
ENSPTIG00000008545	RPUSD1	84	81.982	ENSPCIG00000021216	-	97	69.968	Phascolarctos_cinereus
ENSPTIG00000008545	RPUSD1	77	73.267	ENSPFOG00000007946	rpusd1	99	59.136	Poecilia_formosa
ENSPTIG00000008545	RPUSD1	77	73.267	ENSPLAG00000011925	rpusd1	99	59.136	Poecilia_latipinna
ENSPTIG00000008545	RPUSD1	91	58.804	ENSPMEG00000002910	rpusd1	99	58.804	Poecilia_mexicana
ENSPTIG00000008545	RPUSD1	77	73.267	ENSPREG00000019851	rpusd1	99	58.609	Poecilia_reticulata
ENSPTIG00000008545	RPUSD1	92	69.205	ENSPCAG00000002258	RPUSD1	100	69.205	Procavia_capensis
ENSPTIG00000008545	RPUSD1	99	83.969	ENSPCOG00000022582	RPUSD1	100	83.969	Propithecus_coquereli
ENSPTIG00000008545	RPUSD1	92	81.470	ENSPVAG00000013104	RPUSD1	100	82.051	Pteropus_vampyrus
ENSPTIG00000008545	RPUSD1	77	74.257	ENSPNYG00000024076	rpusd1	99	59.259	Pundamilia_nyererei
ENSPTIG00000008545	RPUSD1	91	58.863	ENSPNAG00000013806	rpusd1	100	58.863	Pygocentrus_nattereri
ENSPTIG00000008545	RPUSD1	92	81.553	ENSRNOG00000023639	Rpusd1	100	82.353	Rattus_norvegicus
ENSPTIG00000008545	RPUSD1	99	83.206	ENSRBIG00000030238	RPUSD1	100	83.206	Rhinopithecus_bieti
ENSPTIG00000008545	RPUSD1	99	83.206	ENSRROG00000036663	RPUSD1	100	83.206	Rhinopithecus_roxellana
ENSPTIG00000008545	RPUSD1	92	84.768	ENSSBOG00000033063	RPUSD1	100	84.768	Saimiri_boliviensis_boliviensis
ENSPTIG00000008545	RPUSD1	84	81.081	ENSSHAG00000013500	RPUSD1	100	70.492	Sarcophilus_harrisii
ENSPTIG00000008545	RPUSD1	80	76.415	ENSSFOG00015014394	rpusd1	99	61.258	Scleropages_formosus
ENSPTIG00000008545	RPUSD1	83	71.429	ENSSMAG00000008045	rpusd1	93	56.230	Scophthalmus_maximus
ENSPTIG00000008545	RPUSD1	82	72.072	ENSSDUG00000001829	rpusd1	98	58.861	Seriola_dumerili
ENSPTIG00000008545	RPUSD1	82	72.072	ENSSLDG00000020853	rpusd1	98	58.861	Seriola_lalandi_dorsalis
ENSPTIG00000008545	RPUSD1	51	88.623	ENSSARG00000011187	-	100	88.623	Sorex_araneus
ENSPTIG00000008545	RPUSD1	57	55.440	ENSSPUG00000005119	-	100	55.440	Sphenodon_punctatus
ENSPTIG00000008545	RPUSD1	77	74.510	ENSSPAG00000012708	rpusd1	98	57.980	Stegastes_partitus
ENSPTIG00000008545	RPUSD1	92	81.905	ENSSSCG00000008000	RPUSD1	99	85.992	Sus_scrofa
ENSPTIG00000008545	RPUSD1	83	80.734	ENSTGUG00000015375	RPUSD1	100	72.941	Taeniopygia_guttata
ENSPTIG00000008545	RPUSD1	90	63.866	ENSTRUG00000003041	rpusd1	98	56.169	Takifugu_rubripes
ENSPTIG00000008545	RPUSD1	77	72.277	ENSTNIG00000002660	rpusd1	99	54.054	Tetraodon_nigroviridis
ENSPTIG00000008545	RPUSD1	92	82.857	ENSTTRG00000010167	RPUSD1	100	83.654	Tursiops_truncatus
ENSPTIG00000008545	RPUSD1	92	91.391	ENSUAMG00000012736	RPUSD1	100	91.391	Ursus_americanus
ENSPTIG00000008545	RPUSD1	92	91.722	ENSUMAG00000021174	RPUSD1	100	91.722	Ursus_maritimus
ENSPTIG00000008545	RPUSD1	92	90.066	ENSVVUG00000012357	RPUSD1	100	90.066	Vulpes_vulpes
ENSPTIG00000008545	RPUSD1	83	74.312	ENSXETG00000007184	rpusd1	100	61.842	Xenopus_tropicalis
ENSPTIG00000008545	RPUSD1	90	63.866	ENSXCOG00000017930	rpusd1	99	57.947	Xiphophorus_couchianus
ENSPTIG00000008545	RPUSD1	77	72.277	ENSXMAG00000024084	rpusd1	99	57.616	Xiphophorus_maculatus