EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000008550 (Gene tree)
Gene ID: 102954918
Gene Symbol: RBM28
Alias: -
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 30510 bases
Position: chrKE721703.1:120349-150858
Accession: 102954918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000006723	RRM_1	PF00076.22	4.4e-57	1	3
ENSPTIP00000006723	RRM_1	PF00076.22	4.4e-57	2	3
ENSPTIP00000006723	RRM_1	PF00076.22	4.4e-57	3	3
ENSPTIP00000006736	RRM_1	PF00076.22	3.7e-29	1	2
ENSPTIP00000006736	RRM_1	PF00076.22	3.7e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000010549	RBM28-201	3934	XM_007078050	ENSPTIP00000006723	746 (aa)	XP_007078112	UPI00042BD0B3
ENSPTIT00000010563	RBM28-202	1818	-	ENSPTIP00000006736	605 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000008550's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000008550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000008550	RBM28	100	100.000	ENSG00000106344	RBM28	100	100.000	Homo_sapiens
ENSPTIG00000008550	RBM28	78	61.538	ENSAPOG00000015512	rbm28	100	50.381	Acanthochromis_polyacanthus
ENSPTIG00000008550	RBM28	100	97.500	ENSAMEG00000004776	RBM28	90	94.565	Ailuropoda_melanoleuca
ENSPTIG00000008550	RBM28	69	56.190	ENSACIG00000023153	rbm28	100	52.092	Amphilophus_citrinellus
ENSPTIG00000008550	RBM28	78	62.500	ENSAOCG00000000462	rbm28	100	50.891	Amphiprion_ocellaris
ENSPTIG00000008550	RBM28	78	62.500	ENSAPEG00000012996	rbm28	100	50.955	Amphiprion_percula
ENSPTIG00000008550	RBM28	80	65.000	ENSATEG00000001672	rbm28	100	49.871	Anabas_testudineus
ENSPTIG00000008550	RBM28	100	100.000	ENSANAG00000033922	RBM28	100	84.901	Aotus_nancymaae
ENSPTIG00000008550	RBM28	100	52.632	ENSACLG00000025024	rbm28	100	50.508	Astatotilapia_calliptera
ENSPTIG00000008550	RBM28	72	58.277	ENSAMXG00000000763	rbm28	99	60.407	Astyanax_mexicanus
ENSPTIG00000008550	RBM28	100	100.000	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSPTIG00000008550	RBM28	100	100.000	ENSCJAG00000017731	RBM28	100	82.546	Callithrix_jacchus
ENSPTIG00000008550	RBM28	100	95.000	ENSCAFG00000001667	RBM28	100	90.679	Canis_familiaris
ENSPTIG00000008550	RBM28	100	95.000	ENSCAFG00020021648	RBM28	100	90.679	Canis_lupus_dingo
ENSPTIG00000008550	RBM28	100	100.000	ENSCHIG00000014146	RBM28	100	84.728	Capra_hircus
ENSPTIG00000008550	RBM28	100	95.000	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSPTIG00000008550	RBM28	83	60.645	ENSCAPG00000013218	RBM28	98	60.328	Cavia_aperea
ENSPTIG00000008550	RBM28	100	95.000	ENSCPOG00000006253	RBM28	100	81.662	Cavia_porcellus
ENSPTIG00000008550	RBM28	100	100.000	ENSCCAG00000035105	RBM28	100	84.190	Cebus_capucinus
ENSPTIG00000008550	RBM28	100	97.500	ENSCATG00000040497	RBM28	100	97.500	Cercocebus_atys
ENSPTIG00000008550	RBM28	100	95.000	ENSCLAG00000003707	RBM28	90	95.000	Chinchilla_lanigera
ENSPTIG00000008550	RBM28	100	100.000	ENSCSAG00000010161	RBM28	100	84.058	Chlorocebus_sabaeus
ENSPTIG00000008550	RBM28	66	81.908	ENSCHOG00000001994	-	63	88.710	Choloepus_hoffmanni
ENSPTIG00000008550	RBM28	63	60.412	ENSCPBG00000018088	RBM28	86	58.747	Chrysemys_picta_bellii
ENSPTIG00000008550	RBM28	95	40.177	ENSCING00000009238	-	84	40.120	Ciona_intestinalis
ENSPTIG00000008550	RBM28	55	43.195	ENSCSAVG00000007149	-	95	43.323	Ciona_savignyi
ENSPTIG00000008550	RBM28	88	100.000	ENSCANG00000038397	RBM28	100	100.000	Colobus_angolensis_palliatus
ENSPTIG00000008550	RBM28	89	100.000	ENSCGRG00001021278	Rbm28	82	100.000	Cricetulus_griseus_chok1gshd
ENSPTIG00000008550	RBM28	100	100.000	ENSCGRG00000005098	Rbm28	82	100.000	Cricetulus_griseus_crigri
ENSPTIG00000008550	RBM28	100	54.545	ENSCSEG00000004212	rbm28	100	49.936	Cynoglossus_semilaevis
ENSPTIG00000008550	RBM28	79	65.000	ENSCVAG00000010493	rbm28	99	50.192	Cyprinodon_variegatus
ENSPTIG00000008550	RBM28	86	56.757	ENSDARG00000025332	rbm28	100	50.472	Danio_rerio
ENSPTIG00000008550	RBM28	100	100.000	ENSDNOG00000001124	RBM28	100	84.565	Dasypus_novemcinctus
ENSPTIG00000008550	RBM28	82	79.960	ENSDORG00000004184	Rbm28	98	80.160	Dipodomys_ordii
ENSPTIG00000008550	RBM28	69	40.326	FBgn0260456	CG4806	93	35.897	Drosophila_melanogaster
ENSPTIG00000008550	RBM28	100	90.909	ENSETEG00000007130	RBM28	82	90.909	Echinops_telfairi
ENSPTIG00000008550	RBM28	99	40.915	ENSEBUG00000004419	rbm28	98	40.933	Eptatretus_burgeri
ENSPTIG00000008550	RBM28	100	97.500	ENSEASG00005008528	RBM28	100	86.571	Equus_asinus_asinus
ENSPTIG00000008550	RBM28	100	97.500	ENSECAG00000007745	RBM28	100	86.068	Equus_caballus
ENSPTIG00000008550	RBM28	100	95.000	ENSEEUG00000002389	RBM28	82	95.000	Erinaceus_europaeus
ENSPTIG00000008550	RBM28	100	62.500	ENSELUG00000020602	rbm28	100	52.207	Esox_lucius
ENSPTIG00000008550	RBM28	100	100.000	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSPTIG00000008550	RBM28	100	92.500	ENSFDAG00000010169	RBM28	100	83.646	Fukomys_damarensis
ENSPTIG00000008550	RBM28	83	52.392	ENSGMOG00000007091	rbm28	99	49.260	Gadus_morhua
ENSPTIG00000008550	RBM28	72	55.257	ENSGAFG00000004802	rbm28	97	55.088	Gambusia_affinis
ENSPTIG00000008550	RBM28	77	65.714	ENSGACG00000012612	rbm28	100	51.126	Gasterosteus_aculeatus
ENSPTIG00000008550	RBM28	77	79.121	ENSGAGG00000008873	RBM28	93	79.121	Gopherus_agassizii
ENSPTIG00000008550	RBM28	95	82.247	ENSGGOG00000004644	RBM28	97	82.663	Gorilla_gorilla
ENSPTIG00000008550	RBM28	90	51.783	ENSHBUG00000009611	rbm28	94	51.485	Haplochromis_burtoni
ENSPTIG00000008550	RBM28	100	95.000	ENSHGLG00000005409	RBM28	100	83.110	Heterocephalus_glaber_female
ENSPTIG00000008550	RBM28	100	95.000	ENSHGLG00100016458	RBM28	100	83.110	Heterocephalus_glaber_male
ENSPTIG00000008550	RBM28	79	67.500	ENSHCOG00000010597	rbm28	74	67.500	Hippocampus_comes
ENSPTIG00000008550	RBM28	70	49.763	ENSIPUG00000007103	rbm28	94	46.817	Ictalurus_punctatus
ENSPTIG00000008550	RBM28	100	93.182	ENSSTOG00000002169	RBM28	100	82.376	Ictidomys_tridecemlineatus
ENSPTIG00000008550	RBM28	96	97.500	ENSJJAG00000022400	Rbm28	100	74.572	Jaculus_jaculus
ENSPTIG00000008550	RBM28	80	65.000	ENSLBEG00000012998	rbm28	100	50.447	Labrus_bergylta
ENSPTIG00000008550	RBM28	67	76.667	ENSLACG00000010485	-	100	58.824	Latimeria_chalumnae
ENSPTIG00000008550	RBM28	89	70.000	ENSLOCG00000015541	rbm28	84	63.402	Lepisosteus_oculatus
ENSPTIG00000008550	RBM28	100	100.000	ENSLAFG00000010717	RBM28	100	83.069	Loxodonta_africana
ENSPTIG00000008550	RBM28	100	97.500	ENSMFAG00000031036	RBM28	100	97.500	Macaca_fascicularis
ENSPTIG00000008550	RBM28	100	97.500	ENSMMUG00000007250	RBM28	100	97.500	Macaca_mulatta
ENSPTIG00000008550	RBM28	100	97.500	ENSMNEG00000036970	RBM28	100	97.500	Macaca_nemestrina
ENSPTIG00000008550	RBM28	80	97.500	ENSMLEG00000037717	RBM28	100	82.128	Mandrillus_leucophaeus
ENSPTIG00000008550	RBM28	100	62.500	ENSMAMG00000008525	rbm28	100	52.246	Mastacembelus_armatus
ENSPTIG00000008550	RBM28	93	49.657	ENSMZEG00005019625	rbm28	100	50.068	Maylandia_zebra
ENSPTIG00000008550	RBM28	100	100.000	ENSMAUG00000002263	Rbm28	82	100.000	Mesocricetus_auratus
ENSPTIG00000008550	RBM28	94	79.027	ENSMICG00000000107	RBM28	100	80.194	Microcebus_murinus
ENSPTIG00000008550	RBM28	100	100.000	ENSMOCG00000014615	Rbm28	81	100.000	Microtus_ochrogaster
ENSPTIG00000008550	RBM28	72	54.253	ENSMMOG00000008600	rbm28	100	51.329	Mola_mola
ENSPTIG00000008550	RBM28	100	87.500	ENSMODG00000015151	RBM28	100	72.881	Monodelphis_domestica
ENSPTIG00000008550	RBM28	79	65.000	ENSMALG00000006419	rbm28	100	49.611	Monopterus_albus
ENSPTIG00000008550	RBM28	100	97.500	MGP_CAROLIEiJ_G0028162	Rbm28	100	80.106	Mus_caroli
ENSPTIG00000008550	RBM28	100	97.500	ENSMUSG00000029701	Rbm28	100	80.319	Mus_musculus
ENSPTIG00000008550	RBM28	100	97.500	MGP_PahariEiJ_G0021920	Rbm28	100	80.397	Mus_pahari
ENSPTIG00000008550	RBM28	100	97.500	MGP_SPRETEiJ_G0029162	Rbm28	100	80.718	Mus_spretus
ENSPTIG00000008550	RBM28	100	100.000	ENSMPUG00000006511	RBM28	100	89.578	Mustela_putorius_furo
ENSPTIG00000008550	RBM28	100	100.000	ENSMLUG00000002186	RBM28	100	86.089	Myotis_lucifugus
ENSPTIG00000008550	RBM28	100	100.000	ENSNGAG00000006480	-	81	100.000	Nannospalax_galili
ENSPTIG00000008550	RBM28	100	92.500	ENSNGAG00000017946	-	100	78.313	Nannospalax_galili
ENSPTIG00000008550	RBM28	100	100.000	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSPTIG00000008550	RBM28	82	82.099	ENSMEUG00000009611	RBM28	90	82.099	Notamacropus_eugenii
ENSPTIG00000008550	RBM28	77	95.000	ENSOPRG00000015140	RBM28	90	74.759	Ochotona_princeps
ENSPTIG00000008550	RBM28	100	77.660	ENSODEG00000003213	-	100	78.059	Octodon_degus
ENSPTIG00000008550	RBM28	94	69.757	ENSODEG00000013217	-	99	69.000	Octodon_degus
ENSPTIG00000008550	RBM28	81	53.863	ENSONIG00000014924	rbm28	100	50.585	Oreochromis_niloticus
ENSPTIG00000008550	RBM28	100	85.000	ENSOANG00000000815	-	82	85.000	Ornithorhynchus_anatinus
ENSPTIG00000008550	RBM28	100	100.000	ENSOCUG00000003009	RBM28	82	100.000	Oryctolagus_cuniculus
ENSPTIG00000008550	RBM28	99	67.500	ENSORLG00000009636	rbm28	82	67.500	Oryzias_latipes
ENSPTIG00000008550	RBM28	80	67.500	ENSORLG00020002123	rbm28	99	50.771	Oryzias_latipes_hni
ENSPTIG00000008550	RBM28	78	72.222	ENSORLG00015015030	rbm28	98	59.223	Oryzias_latipes_hsok
ENSPTIG00000008550	RBM28	79	67.500	ENSOMEG00000007801	rbm28	100	52.235	Oryzias_melastigma
ENSPTIG00000008550	RBM28	94	92.500	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSPTIG00000008550	RBM28	100	100.000	ENSOARG00000002547	RBM28	100	84.707	Ovis_aries
ENSPTIG00000008550	RBM28	100	100.000	ENSPPAG00000041730	RBM28	100	100.000	Pan_paniscus
ENSPTIG00000008550	RBM28	100	100.000	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSPTIG00000008550	RBM28	100	100.000	ENSPTRG00000019659	RBM28	100	100.000	Pan_troglodytes
ENSPTIG00000008550	RBM28	100	97.500	ENSPANG00000022295	RBM28	100	97.500	Papio_anubis
ENSPTIG00000008550	RBM28	99	57.500	ENSPKIG00000023453	rbm28	99	51.195	Paramormyrops_kingsleyae
ENSPTIG00000008550	RBM28	84	59.606	ENSPMGG00000012840	rbm28	100	49.598	Periophthalmus_magnuspinnatus
ENSPTIG00000008550	RBM28	95	100.000	ENSPEMG00000020673	Rbm28	80	100.000	Peromyscus_maniculatus_bairdii
ENSPTIG00000008550	RBM28	59	45.383	ENSPMAG00000002948	-	99	46.237	Petromyzon_marinus
ENSPTIG00000008550	RBM28	100	87.500	ENSPCIG00000012810	RBM28	100	72.259	Phascolarctos_cinereus
ENSPTIG00000008550	RBM28	82	65.000	ENSPFOG00000018209	rbm28	100	49.805	Poecilia_formosa
ENSPTIG00000008550	RBM28	81	65.000	ENSPLAG00000016078	rbm28	96	49.419	Poecilia_latipinna
ENSPTIG00000008550	RBM28	82	65.000	ENSPMEG00000004292	rbm28	100	49.870	Poecilia_mexicana
ENSPTIG00000008550	RBM28	80	65.000	ENSPREG00000014287	rbm28	98	49.934	Poecilia_reticulata
ENSPTIG00000008550	RBM28	100	100.000	ENSPPYG00000017975	RBM28	100	84.321	Pongo_abelii
ENSPTIG00000008550	RBM28	65	97.500	ENSPCAG00000008223	RBM28	83	76.731	Procavia_capensis
ENSPTIG00000008550	RBM28	100	100.000	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSPTIG00000008550	RBM28	73	100.000	ENSPVAG00000005443	RBM28	77	92.093	Pteropus_vampyrus
ENSPTIG00000008550	RBM28	100	52.632	ENSPNYG00000014003	rbm28	100	50.383	Pundamilia_nyererei
ENSPTIG00000008550	RBM28	100	97.500	ENSRNOG00000005468	Rbm28	82	97.500	Rattus_norvegicus
ENSPTIG00000008550	RBM28	100	100.000	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSPTIG00000008550	RBM28	100	100.000	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSPTIG00000008550	RBM28	82	100.000	ENSSBOG00000012308	RBM28	100	79.058	Saimiri_boliviensis_boliviensis
ENSPTIG00000008550	RBM28	96	68.044	ENSSHAG00000017017	RBM28	99	69.061	Sarcophilus_harrisii
ENSPTIG00000008550	RBM28	77	62.500	ENSSFOG00015001231	rbm28	100	54.522	Scleropages_formosus
ENSPTIG00000008550	RBM28	72	53.968	ENSSMAG00000003885	rbm28	99	51.639	Scophthalmus_maximus
ENSPTIG00000008550	RBM28	73	56.000	ENSSDUG00000014270	rbm28	98	53.162	Seriola_dumerili
ENSPTIG00000008550	RBM28	79	57.500	ENSSLDG00000020099	rbm28	100	49.495	Seriola_lalandi_dorsalis
ENSPTIG00000008550	RBM28	73	97.500	ENSSARG00000008303	RBM28	81	86.967	Sorex_araneus
ENSPTIG00000008550	RBM28	67	73.529	ENSSPUG00000000838	RBM28	79	73.529	Sphenodon_punctatus
ENSPTIG00000008550	RBM28	72	52.876	ENSSPAG00000023305	rbm28	100	49.733	Stegastes_partitus
ENSPTIG00000008550	RBM28	100	100.000	ENSSSCG00000031847	RBM28	100	85.317	Sus_scrofa
ENSPTIG00000008550	RBM28	80	65.000	ENSTRUG00000013311	rbm28	99	49.378	Takifugu_rubripes
ENSPTIG00000008550	RBM28	99	65.000	ENSTNIG00000017962	rbm28	99	51.886	Tetraodon_nigroviridis
ENSPTIG00000008550	RBM28	86	86.982	ENSTBEG00000012749	RBM28	86	86.982	Tupaia_belangeri
ENSPTIG00000008550	RBM28	100	100.000	ENSTTRG00000013647	RBM28	100	82.895	Tursiops_truncatus
ENSPTIG00000008550	RBM28	100	100.000	ENSUAMG00000006949	RBM28	85	100.000	Ursus_americanus
ENSPTIG00000008550	RBM28	100	100.000	ENSUMAG00000005997	RBM28	100	90.476	Ursus_maritimus
ENSPTIG00000008550	RBM28	94	77.098	ENSVPAG00000008304	RBM28	88	79.787	Vicugna_pacos
ENSPTIG00000008550	RBM28	100	95.000	ENSVVUG00000007270	RBM28	100	90.413	Vulpes_vulpes
ENSPTIG00000008550	RBM28	99	67.500	ENSXETG00000009271	rbm28	99	55.954	Xenopus_tropicalis
ENSPTIG00000008550	RBM28	72	54.214	ENSXCOG00000020357	rbm28	99	53.542	Xiphophorus_couchianus
ENSPTIG00000008550	RBM28	79	67.500	ENSXMAG00000004415	rbm28	98	50.525	Xiphophorus_maculatus