EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000008716 (Gene tree)
Gene ID: 102953002
Gene Symbol: CSTF3
Alias: -
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 71002 bases
Position: chrKE721761.1:3526209-3597210
Accession: 102953002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000006954	Suf	PF05843.14	2.6e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000010789	CSTF3-201	2154	XM_007082033	ENSPTIP00000006954	717 (aa)	XP_007082095	UPI000298D384

Gene Model

Click here to download ENSPTIG00000008716's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000008716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000008716	CSTF3	100	99.721	ENSG00000176102	CSTF3	100	99.721	Homo_sapiens
ENSPTIG00000008716	CSTF3	100	91.504	ENSAPOG00000014054	cstf3	100	91.504	Acanthochromis_polyacanthus
ENSPTIG00000008716	CSTF3	99	99.718	ENSAMEG00000007187	CSTF3	98	99.718	Ailuropoda_melanoleuca
ENSPTIG00000008716	CSTF3	87	86.240	ENSACIG00000005539	cstf3	100	86.240	Amphilophus_citrinellus
ENSPTIG00000008716	CSTF3	100	91.226	ENSAOCG00000010930	cstf3	100	91.226	Amphiprion_ocellaris
ENSPTIG00000008716	CSTF3	100	91.226	ENSAPEG00000007903	cstf3	100	91.226	Amphiprion_percula
ENSPTIG00000008716	CSTF3	100	91.226	ENSATEG00000000190	cstf3	100	91.226	Anabas_testudineus
ENSPTIG00000008716	CSTF3	99	98.023	ENSAPLG00000007217	CSTF3	100	98.023	Anas_platyrhynchos
ENSPTIG00000008716	CSTF3	100	95.682	ENSACAG00000002823	CSTF3	100	95.682	Anolis_carolinensis
ENSPTIG00000008716	CSTF3	100	99.721	ENSANAG00000020699	CSTF3	100	99.840	Aotus_nancymaae
ENSPTIG00000008716	CSTF3	98	91.915	ENSACLG00000007820	cstf3	100	91.226	Astatotilapia_calliptera
ENSPTIG00000008716	CSTF3	100	90.808	ENSAMXG00000014198	cstf3	100	91.086	Astyanax_mexicanus
ENSPTIG00000008716	CSTF3	100	99.721	ENSBTAG00000008617	CSTF3	100	99.852	Bos_taurus
ENSPTIG00000008716	CSTF3	97	49.313	WBGene00006307	suf-1	99	49.313	Caenorhabditis_elegans
ENSPTIG00000008716	CSTF3	100	99.721	ENSCJAG00000005533	CSTF3	100	99.840	Callithrix_jacchus
ENSPTIG00000008716	CSTF3	100	99.861	ENSCAFG00000007264	CSTF3	100	99.861	Canis_familiaris
ENSPTIG00000008716	CSTF3	99	99.859	ENSCAFG00020002715	CSTF3	99	99.859	Canis_lupus_dingo
ENSPTIG00000008716	CSTF3	98	98.293	ENSCHIG00000016418	CSTF3	100	99.840	Capra_hircus
ENSPTIG00000008716	CSTF3	99	99.718	ENSTSYG00000000451	CSTF3	100	99.718	Carlito_syrichta
ENSPTIG00000008716	CSTF3	83	96.023	ENSCAPG00000010958	CSTF3	98	96.023	Cavia_aperea
ENSPTIG00000008716	CSTF3	100	99.442	ENSCPOG00000005545	CSTF3	100	99.442	Cavia_porcellus
ENSPTIG00000008716	CSTF3	100	99.721	ENSCCAG00000024790	CSTF3	100	99.840	Cebus_capucinus
ENSPTIG00000008716	CSTF3	100	99.721	ENSCATG00000007080	CSTF3	100	99.840	Cercocebus_atys
ENSPTIG00000008716	CSTF3	100	99.721	ENSCLAG00000016179	CSTF3	100	99.721	Chinchilla_lanigera
ENSPTIG00000008716	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSPTIG00000008716	CSTF3	100	97.354	ENSCPBG00000006753	CSTF3	100	97.354	Chrysemys_picta_bellii
ENSPTIG00000008716	CSTF3	99	62.098	ENSCING00000006401	-	98	62.098	Ciona_intestinalis
ENSPTIG00000008716	CSTF3	98	61.925	ENSCSAVG00000004851	-	100	61.925	Ciona_savignyi
ENSPTIG00000008716	CSTF3	100	99.721	ENSCANG00000035468	CSTF3	100	99.840	Colobus_angolensis_palliatus
ENSPTIG00000008716	CSTF3	100	99.163	ENSCGRG00001014773	Cstf3	100	99.163	Cricetulus_griseus_chok1gshd
ENSPTIG00000008716	CSTF3	100	99.163	ENSCGRG00000004142	Cstf3	100	99.163	Cricetulus_griseus_crigri
ENSPTIG00000008716	CSTF3	100	91.213	ENSCSEG00000014283	cstf3	100	91.213	Cynoglossus_semilaevis
ENSPTIG00000008716	CSTF3	100	90.390	ENSCVAG00000019739	cstf3	100	90.390	Cyprinodon_variegatus
ENSPTIG00000008716	CSTF3	100	91.074	ENSDARG00000018904	cstf3	100	91.074	Danio_rerio
ENSPTIG00000008716	CSTF3	99	98.880	ENSDNOG00000007366	CSTF3	99	98.880	Dasypus_novemcinctus
ENSPTIG00000008716	CSTF3	99	91.961	ENSDORG00000005898	Cstf3	99	91.961	Dipodomys_ordii
ENSPTIG00000008716	CSTF3	98	57.123	FBgn0003559	su(f)	98	57.123	Drosophila_melanogaster
ENSPTIG00000008716	CSTF3	90	94.081	ENSETEG00000017097	CSTF3	90	94.081	Echinops_telfairi
ENSPTIG00000008716	CSTF3	84	74.050	ENSEBUG00000015459	cstf3	96	74.050	Eptatretus_burgeri
ENSPTIG00000008716	CSTF3	98	99.714	ENSEASG00005019884	CSTF3	100	99.714	Equus_asinus_asinus
ENSPTIG00000008716	CSTF3	98	99.714	ENSECAG00000023338	CSTF3	100	99.714	Equus_caballus
ENSPTIG00000008716	CSTF3	100	94.003	ENSEEUG00000015167	CSTF3	100	94.003	Erinaceus_europaeus
ENSPTIG00000008716	CSTF3	100	89.819	ENSELUG00000023393	cstf3	100	89.819	Esox_lucius
ENSPTIG00000008716	CSTF3	100	100.000	ENSFCAG00000030711	CSTF3	100	100.000	Felis_catus
ENSPTIG00000008716	CSTF3	93	98.649	ENSFALG00000010764	CSTF3	100	96.928	Ficedula_albicollis
ENSPTIG00000008716	CSTF3	100	99.861	ENSFDAG00000012082	CSTF3	100	99.861	Fukomys_damarensis
ENSPTIG00000008716	CSTF3	100	90.390	ENSFHEG00000020623	cstf3	100	90.390	Fundulus_heteroclitus
ENSPTIG00000008716	CSTF3	100	89.430	ENSGMOG00000012275	cstf3	100	89.430	Gadus_morhua
ENSPTIG00000008716	CSTF3	100	97.911	ENSGALG00000011685	CSTF3	100	97.911	Gallus_gallus
ENSPTIG00000008716	CSTF3	100	90.808	ENSGAFG00000002181	cstf3	100	90.808	Gambusia_affinis
ENSPTIG00000008716	CSTF3	100	90.669	ENSGACG00000015997	cstf3	100	90.669	Gasterosteus_aculeatus
ENSPTIG00000008716	CSTF3	100	97.214	ENSGAGG00000006200	CSTF3	100	97.214	Gopherus_agassizii
ENSPTIG00000008716	CSTF3	99	93.935	ENSGGOG00000026591	CSTF3	99	93.935	Gorilla_gorilla
ENSPTIG00000008716	CSTF3	98	91.915	ENSHBUG00000016656	cstf3	100	91.226	Haplochromis_burtoni
ENSPTIG00000008716	CSTF3	100	99.442	ENSHGLG00000017834	CSTF3	100	99.442	Heterocephalus_glaber_female
ENSPTIG00000008716	CSTF3	100	99.442	ENSHGLG00100018042	CSTF3	100	99.442	Heterocephalus_glaber_male
ENSPTIG00000008716	CSTF3	98	89.235	ENSHCOG00000015218	cstf3	100	88.719	Hippocampus_comes
ENSPTIG00000008716	CSTF3	100	90.377	ENSIPUG00000013170	CSTF3	100	90.377	Ictalurus_punctatus
ENSPTIG00000008716	CSTF3	100	99.721	ENSSTOG00000013306	CSTF3	100	99.721	Ictidomys_tridecemlineatus
ENSPTIG00000008716	CSTF3	99	87.308	ENSJJAG00000018430	Cstf3	99	87.308	Jaculus_jaculus
ENSPTIG00000008716	CSTF3	99	90.210	ENSKMAG00000010916	cstf3	99	90.210	Kryptolebias_marmoratus
ENSPTIG00000008716	CSTF3	100	90.251	ENSLBEG00000002306	cstf3	100	90.251	Labrus_bergylta
ENSPTIG00000008716	CSTF3	100	93.863	ENSLACG00000017296	CSTF3	100	93.863	Latimeria_chalumnae
ENSPTIG00000008716	CSTF3	100	93.166	ENSLOCG00000004415	cstf3	100	93.166	Lepisosteus_oculatus
ENSPTIG00000008716	CSTF3	100	99.303	ENSLAFG00000008712	CSTF3	100	99.303	Loxodonta_africana
ENSPTIG00000008716	CSTF3	100	99.721	ENSMFAG00000029516	CSTF3	100	99.840	Macaca_fascicularis
ENSPTIG00000008716	CSTF3	100	99.721	ENSMMUG00000002542	CSTF3	100	99.721	Macaca_mulatta
ENSPTIG00000008716	CSTF3	100	99.721	ENSMNEG00000021807	CSTF3	100	99.840	Macaca_nemestrina
ENSPTIG00000008716	CSTF3	100	99.721	ENSMLEG00000039594	CSTF3	100	99.840	Mandrillus_leucophaeus
ENSPTIG00000008716	CSTF3	100	91.226	ENSMAMG00000020423	cstf3	100	91.226	Mastacembelus_armatus
ENSPTIG00000008716	CSTF3	98	91.915	ENSMZEG00005012082	cstf3	100	91.226	Maylandia_zebra
ENSPTIG00000008716	CSTF3	100	98.050	ENSMGAG00000001383	CSTF3	100	98.050	Meleagris_gallopavo
ENSPTIG00000008716	CSTF3	100	99.024	ENSMAUG00000002487	Cstf3	100	99.024	Mesocricetus_auratus
ENSPTIG00000008716	CSTF3	100	99.442	ENSMICG00000004784	CSTF3	100	99.520	Microcebus_murinus
ENSPTIG00000008716	CSTF3	100	99.163	ENSMOCG00000017583	Cstf3	100	99.163	Microtus_ochrogaster
ENSPTIG00000008716	CSTF3	99	91.268	ENSMMOG00000016026	cstf3	95	91.268	Mola_mola
ENSPTIG00000008716	CSTF3	100	98.605	ENSMODG00000009745	-	100	98.605	Monodelphis_domestica
ENSPTIG00000008716	CSTF3	100	84.100	ENSMODG00000025205	-	100	84.100	Monodelphis_domestica
ENSPTIG00000008716	CSTF3	100	90.947	ENSMALG00000012050	cstf3	100	90.947	Monopterus_albus
ENSPTIG00000008716	CSTF3	100	99.163	MGP_CAROLIEiJ_G0024026	Cstf3	100	99.163	Mus_caroli
ENSPTIG00000008716	CSTF3	100	99.163	ENSMUSG00000027176	Cstf3	100	99.163	Mus_musculus
ENSPTIG00000008716	CSTF3	100	99.163	MGP_PahariEiJ_G0025464	Cstf3	100	99.163	Mus_pahari
ENSPTIG00000008716	CSTF3	100	99.163	MGP_SPRETEiJ_G0024939	Cstf3	100	99.163	Mus_spretus
ENSPTIG00000008716	CSTF3	100	99.721	ENSMPUG00000011457	CSTF3	100	99.721	Mustela_putorius_furo
ENSPTIG00000008716	CSTF3	99	99.577	ENSMLUG00000003073	-	99	99.577	Myotis_lucifugus
ENSPTIG00000008716	CSTF3	100	96.095	ENSMLUG00000026022	-	100	96.095	Myotis_lucifugus
ENSPTIG00000008716	CSTF3	100	99.163	ENSNGAG00000010677	Cstf3	100	99.163	Nannospalax_galili
ENSPTIG00000008716	CSTF3	87	91.200	ENSNBRG00000007345	cstf3	100	91.200	Neolamprologus_brichardi
ENSPTIG00000008716	CSTF3	100	99.721	ENSNLEG00000017901	CSTF3	100	99.840	Nomascus_leucogenys
ENSPTIG00000008716	CSTF3	73	95.029	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSPTIG00000008716	CSTF3	67	97.333	ENSOPRG00000000199	-	67	97.333	Ochotona_princeps
ENSPTIG00000008716	CSTF3	89	87.264	ENSODEG00000006311	-	97	87.264	Octodon_degus
ENSPTIG00000008716	CSTF3	100	99.721	ENSODEG00000016737	-	100	99.721	Octodon_degus
ENSPTIG00000008716	CSTF3	98	91.915	ENSONIG00000005563	cstf3	100	91.226	Oreochromis_niloticus
ENSPTIG00000008716	CSTF3	90	97.077	ENSOANG00000015140	CSTF3	100	97.077	Ornithorhynchus_anatinus
ENSPTIG00000008716	CSTF3	100	99.303	ENSOCUG00000015417	CSTF3	100	99.303	Oryctolagus_cuniculus
ENSPTIG00000008716	CSTF3	100	90.795	ENSORLG00000009762	cstf3	100	90.795	Oryzias_latipes
ENSPTIG00000008716	CSTF3	100	90.795	ENSORLG00020005540	cstf3	100	90.795	Oryzias_latipes_hni
ENSPTIG00000008716	CSTF3	100	90.656	ENSORLG00015003551	cstf3	100	90.656	Oryzias_latipes_hsok
ENSPTIG00000008716	CSTF3	100	90.237	ENSOMEG00000003848	cstf3	100	90.237	Oryzias_melastigma
ENSPTIG00000008716	CSTF3	100	99.167	ENSOGAG00000010229	CSTF3	100	99.167	Otolemur_garnettii
ENSPTIG00000008716	CSTF3	90	99.689	ENSOARG00000017271	CSTF3	99	99.689	Ovis_aries
ENSPTIG00000008716	CSTF3	99	96.192	ENSPPAG00000027358	CSTF3	99	96.192	Pan_paniscus
ENSPTIG00000008716	CSTF3	100	100.000	ENSPPRG00000016852	CSTF3	100	100.000	Panthera_pardus
ENSPTIG00000008716	CSTF3	100	99.721	ENSPTRG00000003485	CSTF3	100	99.721	Pan_troglodytes
ENSPTIG00000008716	CSTF3	100	99.721	ENSPANG00000013722	CSTF3	100	99.721	Papio_anubis
ENSPTIG00000008716	CSTF3	100	92.469	ENSPKIG00000023648	cstf3	100	92.469	Paramormyrops_kingsleyae
ENSPTIG00000008716	CSTF3	100	96.936	ENSPSIG00000009173	CSTF3	100	96.936	Pelodiscus_sinensis
ENSPTIG00000008716	CSTF3	76	94.698	ENSPMGG00000000164	cstf3	99	94.698	Periophthalmus_magnuspinnatus
ENSPTIG00000008716	CSTF3	100	99.024	ENSPEMG00000011481	Cstf3	100	99.024	Peromyscus_maniculatus_bairdii
ENSPTIG00000008716	CSTF3	99	80.337	ENSPMAG00000007282	cstf3	99	80.337	Petromyzon_marinus
ENSPTIG00000008716	CSTF3	99	95.915	ENSPCIG00000026406	-	100	98.080	Phascolarctos_cinereus
ENSPTIG00000008716	CSTF3	100	80.919	ENSPCIG00000030419	-	90	81.616	Phascolarctos_cinereus
ENSPTIG00000008716	CSTF3	100	90.947	ENSPFOG00000017239	cstf3	100	90.947	Poecilia_formosa
ENSPTIG00000008716	CSTF3	100	90.947	ENSPLAG00000009456	cstf3	100	90.947	Poecilia_latipinna
ENSPTIG00000008716	CSTF3	100	90.947	ENSPMEG00000010320	cstf3	100	90.947	Poecilia_mexicana
ENSPTIG00000008716	CSTF3	100	90.947	ENSPREG00000013549	cstf3	100	90.947	Poecilia_reticulata
ENSPTIG00000008716	CSTF3	100	99.721	ENSPPYG00000003375	CSTF3	100	99.721	Pongo_abelii
ENSPTIG00000008716	CSTF3	71	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSPTIG00000008716	CSTF3	100	94.282	ENSPCOG00000014417	CSTF3	100	94.282	Propithecus_coquereli
ENSPTIG00000008716	CSTF3	100	94.282	ENSPVAG00000002350	CSTF3	100	94.282	Pteropus_vampyrus
ENSPTIG00000008716	CSTF3	98	91.915	ENSPNYG00000018259	cstf3	100	91.226	Pundamilia_nyererei
ENSPTIG00000008716	CSTF3	100	92.190	ENSPNAG00000020182	cstf3	100	92.190	Pygocentrus_nattereri
ENSPTIG00000008716	CSTF3	87	99.040	ENSRNOG00000012089	Cstf3	100	99.040	Rattus_norvegicus
ENSPTIG00000008716	CSTF3	99	98.449	ENSRBIG00000044258	CSTF3	100	99.840	Rhinopithecus_bieti
ENSPTIG00000008716	CSTF3	100	99.721	ENSRROG00000043450	CSTF3	100	99.840	Rhinopithecus_roxellana
ENSPTIG00000008716	CSTF3	100	99.721	ENSSBOG00000024764	CSTF3	100	99.840	Saimiri_boliviensis_boliviensis
ENSPTIG00000008716	CSTF3	100	97.768	ENSSHAG00000018128	-	100	97.768	Sarcophilus_harrisii
ENSPTIG00000008716	CSTF3	100	85.216	ENSSHAG00000003135	-	99	85.216	Sarcophilus_harrisii
ENSPTIG00000008716	CSTF3	100	92.190	ENSSFOG00015022133	cstf3	100	92.190	Scleropages_formosus
ENSPTIG00000008716	CSTF3	100	90.390	ENSSMAG00000002197	cstf3	100	90.390	Scophthalmus_maximus
ENSPTIG00000008716	CSTF3	100	91.226	ENSSDUG00000020426	cstf3	100	91.226	Seriola_dumerili
ENSPTIG00000008716	CSTF3	100	91.365	ENSSLDG00000025649	cstf3	100	91.365	Seriola_lalandi_dorsalis
ENSPTIG00000008716	CSTF3	100	99.303	ENSSARG00000000391	CSTF3	100	99.303	Sorex_araneus
ENSPTIG00000008716	CSTF3	96	97.106	ENSSPUG00000010546	CSTF3	100	97.106	Sphenodon_punctatus
ENSPTIG00000008716	CSTF3	100	91.365	ENSSPAG00000004958	cstf3	100	91.365	Stegastes_partitus
ENSPTIG00000008716	CSTF3	99	99.162	ENSSSCG00000040954	CSTF3	100	99.162	Sus_scrofa
ENSPTIG00000008716	CSTF3	99	97.740	ENSTGUG00000005010	CSTF3	100	97.740	Taeniopygia_guttata
ENSPTIG00000008716	CSTF3	100	89.972	ENSTRUG00000004959	cstf3	100	89.972	Takifugu_rubripes
ENSPTIG00000008716	CSTF3	99	90.845	ENSTNIG00000013811	cstf3	99	90.845	Tetraodon_nigroviridis
ENSPTIG00000008716	CSTF3	90	96.262	ENSTBEG00000001544	CSTF3	90	96.262	Tupaia_belangeri
ENSPTIG00000008716	CSTF3	100	96.653	ENSTTRG00000016366	CSTF3	100	96.653	Tursiops_truncatus
ENSPTIG00000008716	CSTF3	99	99.577	ENSUMAG00000018971	CSTF3	100	99.520	Ursus_maritimus
ENSPTIG00000008716	CSTF3	100	99.582	ENSVPAG00000007800	CSTF3	100	99.582	Vicugna_pacos
ENSPTIG00000008716	CSTF3	99	99.859	ENSVVUG00000014938	CSTF3	100	99.840	Vulpes_vulpes
ENSPTIG00000008716	CSTF3	67	43.621	ENSXETG00000017946	-	100	43.621	Xenopus_tropicalis
ENSPTIG00000008716	CSTF3	88	79.375	ENSXETG00000021399	cstf3	100	80.583	Xenopus_tropicalis
ENSPTIG00000008716	CSTF3	87	90.560	ENSXCOG00000011741	cstf3	100	90.560	Xiphophorus_couchianus
ENSPTIG00000008716	CSTF3	100	90.947	ENSXMAG00000009545	cstf3	100	90.947	Xiphophorus_maculatus