EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000008778 (Gene tree)
Gene ID: 102959212
Gene Symbol: -
Alias: -
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 30066 bases
Position: chrKE721781.1:1064144-1094209
Accession: 102959212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000007053	PWI	PF01480.17	5.5e-30	1	1
ENSPTIP00000007050	PWI	PF01480.17	5.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000010890	-	2616	XM_015538164	ENSPTIP00000007053	871 (aa)	XP_015393650	-
ENSPTIT00000010886	-	2658	XM_007083667	ENSPTIP00000007050	885 (aa)	XP_007083729	-

Gene Model

Click here to download ENSPTIG00000008778's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03013	RNA transport	KEGG
ptg03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000008778's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000008778	-	100	92.896	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSPTIG00000008778	-	100	94.092	ENSAMEG00000010075	SRRM1	100	94.092	Ailuropoda_melanoleuca
ENSPTIG00000008778	-	62	64.815	ENSAPLG00000002066	SRRM1	60	76.357	Anas_platyrhynchos
ENSPTIG00000008778	-	100	90.761	ENSANAG00000035606	SRRM1	100	90.761	Aotus_nancymaae
ENSPTIG00000008778	-	100	92.283	ENSBTAG00000013772	SRRM1	100	92.283	Bos_taurus
ENSPTIG00000008778	-	60	96.000	ENSCJAG00000020822	SRRM1	65	96.075	Callithrix_jacchus
ENSPTIG00000008778	-	100	95.351	ENSCAFG00020020948	SRRM1	100	95.351	Canis_lupus_dingo
ENSPTIG00000008778	-	100	94.444	ENSTSYG00000006782	SRRM1	100	94.444	Carlito_syrichta
ENSPTIG00000008778	-	60	93.321	ENSCCAG00000029474	SRRM1	59	93.625	Cebus_capucinus
ENSPTIG00000008778	-	61	96.660	ENSCATG00000031303	SRRM1	60	96.721	Cercocebus_atys
ENSPTIG00000008778	-	54	99.401	ENSCHOG00000000027	SRRM1	51	99.401	Choloepus_hoffmanni
ENSPTIG00000008778	-	60	93.878	ENSCANG00000028271	SRRM1	59	94.171	Colobus_angolensis_palliatus
ENSPTIG00000008778	-	50	95.711	ENSDNOG00000049141	SRRM1	58	95.040	Dasypus_novemcinctus
ENSPTIG00000008778	-	100	94.426	ENSFCAG00000000678	-	100	94.426	Felis_catus
ENSPTIG00000008778	-	100	92.384	ENSGGOG00000005209	SRRM1	100	92.384	Gorilla_gorilla
ENSPTIG00000008778	-	100	90.761	ENSSTOG00000014640	SRRM1	100	90.761	Ictidomys_tridecemlineatus
ENSPTIG00000008778	-	100	89.630	ENSLAFG00000013830	SRRM1	100	89.630	Loxodonta_africana
ENSPTIG00000008778	-	99	71.346	ENSMFAG00000038841	-	64	75.888	Macaca_fascicularis
ENSPTIG00000008778	-	100	90.761	ENSMFAG00000025726	SRRM1	100	90.761	Macaca_fascicularis
ENSPTIG00000008778	-	99	91.410	ENSMMUG00000006645	SRRM1	99	91.410	Macaca_mulatta
ENSPTIG00000008778	-	57	79.276	ENSMMUG00000039269	-	62	75.836	Macaca_mulatta
ENSPTIG00000008778	-	61	96.660	ENSMNEG00000039415	SRRM1	60	96.721	Macaca_nemestrina
ENSPTIG00000008778	-	61	85.424	ENSMLEG00000038030	-	59	85.326	Mandrillus_leucophaeus
ENSPTIG00000008778	-	61	69.403	ENSMLEG00000032221	-	62	72.253	Mandrillus_leucophaeus
ENSPTIG00000008778	-	100	94.218	ENSMICG00000006553	SRRM1	100	94.218	Microcebus_murinus
ENSPTIG00000008778	-	100	92.896	ENSNLEG00000008966	SRRM1	100	92.896	Nomascus_leucogenys
ENSPTIG00000008778	-	79	89.815	ENSMEUG00000014704	SRRM1	75	94.737	Notamacropus_eugenii
ENSPTIG00000008778	-	61	95.547	ENSOGAG00000010210	SRRM1	60	95.628	Otolemur_garnettii
ENSPTIG00000008778	-	100	92.384	ENSPPAG00000043918	SRRM1	100	92.384	Pan_paniscus
ENSPTIG00000008778	-	100	94.426	ENSPPRG00000002509	SRRM1	100	94.426	Panthera_pardus
ENSPTIG00000008778	-	100	94.308	ENSPTRG00000000349	SRRM1	100	94.308	Pan_troglodytes
ENSPTIG00000008778	-	60	95.857	ENSPANG00000010194	SRRM1	59	94.900	Papio_anubis
ENSPTIG00000008778	-	99	67.436	ENSPANG00000035568	-	62	74.302	Papio_anubis
ENSPTIG00000008778	-	81	100.000	ENSPCAG00000015138	SRRM1	52	100.000	Procavia_capensis
ENSPTIG00000008778	-	100	94.337	ENSPCOG00000021311	SRRM1	100	94.337	Propithecus_coquereli
ENSPTIG00000008778	-	100	93.005	ENSPVAG00000005836	SRRM1	100	93.005	Pteropus_vampyrus
ENSPTIG00000008778	-	60	93.878	ENSRROG00000035151	SRRM1	59	94.171	Rhinopithecus_roxellana
ENSPTIG00000008778	-	88	92.279	ENSSBOG00000019884	SRRM1	99	92.279	Saimiri_boliviensis_boliviensis
ENSPTIG00000008778	-	58	96.635	ENSSHAG00000011061	SRRM1	55	96.078	Sarcophilus_harrisii
ENSPTIG00000008778	-	62	95.410	ENSSARG00000013718	SRRM1	60	95.410	Sorex_araneus
ENSPTIG00000008778	-	62	72.213	ENSSPUG00000015890	SRRM1	58	82.940	Sphenodon_punctatus
ENSPTIG00000008778	-	99	93.392	ENSSSCG00000032947	SRRM1	100	94.091	Sus_scrofa
ENSPTIG00000008778	-	89	94.743	ENSUMAG00000013121	SRRM1	95	94.743	Ursus_maritimus
ENSPTIG00000008778	-	100	92.630	ENSVVUG00000026966	SRRM1	100	92.630	Vulpes_vulpes