EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000008791 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 82222 bases
Position: chrKE721966.1:527524-609745
Accession: 102949340
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000007101	Ago_hook	PF10427.9	5.3e-19	1	1
ENSPTIP00000007101	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000010938	TNRC6C-201	5289	XM_015541725	ENSPTIP00000007101	1762 (aa)	XP_015397211	-

Gene Model

Click here to download ENSPTIG00000008791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000008791's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000008791	TNRC6C	91	37.337	ENSPTIG00000006346	TNRC6A	85	39.598
ENSPTIG00000008791	TNRC6C	61	40.652	ENSPTIG00000022064	TNRC6B	69	36.808

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000008791	TNRC6C	81	96.429	ENSG00000078687	TNRC6C	100	85.345	Homo_sapiens
ENSPTIG00000008791	TNRC6C	68	53.129	ENSAPOG00000019749	tnrc6c1	86	56.553	Acanthochromis_polyacanthus
ENSPTIG00000008791	TNRC6C	87	87.459	ENSAMEG00000013756	TNRC6C	91	87.459	Ailuropoda_melanoleuca
ENSPTIG00000008791	TNRC6C	77	42.351	ENSACIG00000008075	tnrc6c1	98	41.110	Amphilophus_citrinellus
ENSPTIG00000008791	TNRC6C	68	52.948	ENSAOCG00000023968	tnrc6c1	85	56.639	Amphiprion_ocellaris
ENSPTIG00000008791	TNRC6C	68	52.589	ENSAPEG00000009020	tnrc6c1	85	56.639	Amphiprion_percula
ENSPTIG00000008791	TNRC6C	91	83.289	ENSAPLG00000005456	TNRC6C	90	83.243	Anas_platyrhynchos
ENSPTIG00000008791	TNRC6C	70	70.654	ENSACAG00000016198	TNRC6C	68	70.746	Anolis_carolinensis
ENSPTIG00000008791	TNRC6C	69	72.862	ENSANAG00000021554	TNRC6C	90	86.463	Aotus_nancymaae
ENSPTIG00000008791	TNRC6C	71	53.303	ENSACLG00000000424	tnrc6c1	86	54.545	Astatotilapia_calliptera
ENSPTIG00000008791	TNRC6C	90	82.703	ENSBTAG00000018658	TNRC6C	90	82.096	Bos_taurus
ENSPTIG00000008791	TNRC6C	69	94.286	ENSCJAG00000019431	TNRC6C	90	86.463	Callithrix_jacchus
ENSPTIG00000008791	TNRC6C	91	86.757	ENSCAFG00000005224	TNRC6C	90	80.435	Canis_familiaris
ENSPTIG00000008791	TNRC6C	91	86.757	ENSCAFG00020006661	TNRC6C	90	86.900	Canis_lupus_dingo
ENSPTIG00000008791	TNRC6C	91	81.963	ENSCHIG00000026004	TNRC6C	90	80.786	Capra_hircus
ENSPTIG00000008791	TNRC6C	69	73.743	ENSTSYG00000005403	TNRC6C	90	85.590	Carlito_syrichta
ENSPTIG00000008791	TNRC6C	91	81.892	ENSCAPG00000007307	TNRC6C	88	81.892	Cavia_aperea
ENSPTIG00000008791	TNRC6C	91	81.892	ENSCPOG00000000467	TNRC6C	90	83.513	Cavia_porcellus
ENSPTIG00000008791	TNRC6C	91	86.133	ENSCCAG00000030524	TNRC6C	90	86.463	Cebus_capucinus
ENSPTIG00000008791	TNRC6C	81	96.429	ENSCATG00000033135	TNRC6C	90	85.590	Cercocebus_atys
ENSPTIG00000008791	TNRC6C	91	82.162	ENSCLAG00000011139	TNRC6C	88	82.162	Chinchilla_lanigera
ENSPTIG00000008791	TNRC6C	89	86.133	ENSCSAG00000005167	TNRC6C	88	85.676	Chlorocebus_sabaeus
ENSPTIG00000008791	TNRC6C	52	87.500	ENSCHOG00000000088	TNRC6C	54	87.500	Choloepus_hoffmanni
ENSPTIG00000008791	TNRC6C	70	72.936	ENSCPBG00000027960	TNRC6C	90	84.716	Chrysemys_picta_bellii
ENSPTIG00000008791	TNRC6C	68	96.726	ENSCANG00000041771	TNRC6C	90	84.716	Colobus_angolensis_palliatus
ENSPTIG00000008791	TNRC6C	69	87.464	ENSCGRG00001022686	Tnrc6c	90	84.279	Cricetulus_griseus_chok1gshd
ENSPTIG00000008791	TNRC6C	69	87.464	ENSCGRG00000018041	Tnrc6c	90	84.279	Cricetulus_griseus_crigri
ENSPTIG00000008791	TNRC6C	85	55.648	ENSCSEG00000012744	tnrc6c1	85	55.819	Cynoglossus_semilaevis
ENSPTIG00000008791	TNRC6C	86	60.642	ENSDARG00000076847	tnrc6c1	84	62.752	Danio_rerio
ENSPTIG00000008791	TNRC6C	91	75.946	ENSDNOG00000003247	TNRC6C	90	73.319	Dasypus_novemcinctus
ENSPTIG00000008791	TNRC6C	91	74.939	ENSDORG00000004558	Tnrc6c	90	82.533	Dipodomys_ordii
ENSPTIG00000008791	TNRC6C	77	69.935	ENSETEG00000005527	TNRC6C	80	71.429	Echinops_telfairi
ENSPTIG00000008791	TNRC6C	83	84.322	ENSEASG00005004799	TNRC6C	90	84.279	Equus_asinus_asinus
ENSPTIG00000008791	TNRC6C	70	77.311	ENSECAG00000012486	TNRC6C	69	77.727	Equus_caballus
ENSPTIG00000008791	TNRC6C	82	87.500	ENSEEUG00000010008	TNRC6C	87	88.489	Erinaceus_europaeus
ENSPTIG00000008791	TNRC6C	70	82.572	ENSFCAG00000028358	TNRC6C	90	92.576	Felis_catus
ENSPTIG00000008791	TNRC6C	82	84.322	ENSFALG00000000848	TNRC6C	91	84.716	Ficedula_albicollis
ENSPTIG00000008791	TNRC6C	86	84.946	ENSFDAG00000010368	TNRC6C	91	84.946	Fukomys_damarensis
ENSPTIG00000008791	TNRC6C	67	59.770	ENSFHEG00000002936	tnrc6c1	85	55.319	Fundulus_heteroclitus
ENSPTIG00000008791	TNRC6C	70	72.583	ENSGALG00000001725	TNRC6C	91	85.153	Gallus_gallus
ENSPTIG00000008791	TNRC6C	85	54.009	ENSGAFG00000019019	tnrc6c1	87	54.413	Gambusia_affinis
ENSPTIG00000008791	TNRC6C	75	44.536	ENSGACG00000012320	tnrc6c1	93	42.975	Gasterosteus_aculeatus
ENSPTIG00000008791	TNRC6C	70	72.651	ENSGAGG00000022043	TNRC6C	73	72.713	Gopherus_agassizii
ENSPTIG00000008791	TNRC6C	68	96.142	ENSGGOG00000011304	TNRC6C	90	86.463	Gorilla_gorilla
ENSPTIG00000008791	TNRC6C	87	54.621	ENSHBUG00000010846	tnrc6c1	86	56.280	Haplochromis_burtoni
ENSPTIG00000008791	TNRC6C	91	82.480	ENSHGLG00000004809	TNRC6C	90	76.812	Heterocephalus_glaber_female
ENSPTIG00000008791	TNRC6C	90	82.480	ENSHGLG00100012597	TNRC6C	90	76.812	Heterocephalus_glaber_male
ENSPTIG00000008791	TNRC6C	85	58.880	ENSIPUG00000000818	tnrc6c1	93	45.424	Ictalurus_punctatus
ENSPTIG00000008791	TNRC6C	90	80.541	ENSSTOG00000009101	TNRC6C	90	82.437	Ictidomys_tridecemlineatus
ENSPTIG00000008791	TNRC6C	90	78.610	ENSJJAG00000017055	Tnrc6c	90	75.883	Jaculus_jaculus
ENSPTIG00000008791	TNRC6C	91	45.407	ENSKMAG00000021023	tnrc6c1	92	50.211	Kryptolebias_marmoratus
ENSPTIG00000008791	TNRC6C	69	60.474	ENSLACG00000015283	TNRC6C	74	60.336	Latimeria_chalumnae
ENSPTIG00000008791	TNRC6C	85	59.690	ENSLOCG00000013377	tnrc6c1	85	61.573	Lepisosteus_oculatus
ENSPTIG00000008791	TNRC6C	91	84.085	ENSLAFG00000011122	TNRC6C	90	83.828	Loxodonta_africana
ENSPTIG00000008791	TNRC6C	81	96.429	ENSMFAG00000043943	TNRC6C	90	85.590	Macaca_fascicularis
ENSPTIG00000008791	TNRC6C	81	96.429	ENSMMUG00000011924	TNRC6C	90	85.590	Macaca_mulatta
ENSPTIG00000008791	TNRC6C	81	96.429	ENSMNEG00000030405	TNRC6C	90	85.590	Macaca_nemestrina
ENSPTIG00000008791	TNRC6C	81	96.429	ENSMLEG00000033436	TNRC6C	90	85.590	Mandrillus_leucophaeus
ENSPTIG00000008791	TNRC6C	85	51.130	ENSMAMG00000023613	tnrc6c1	86	56.184	Mastacembelus_armatus
ENSPTIG00000008791	TNRC6C	87	54.621	ENSMZEG00005010920	tnrc6c1	86	56.280	Maylandia_zebra
ENSPTIG00000008791	TNRC6C	86	83.554	ENSMGAG00000003906	TNRC6C	91	83.514	Meleagris_gallopavo
ENSPTIG00000008791	TNRC6C	69	92.593	ENSMAUG00000021618	Tnrc6c	90	85.153	Mesocricetus_auratus
ENSPTIG00000008791	TNRC6C	90	85.271	ENSMICG00000003952	TNRC6C	90	86.026	Microcebus_murinus
ENSPTIG00000008791	TNRC6C	78	43.816	ENSMMOG00000005203	tnrc6c1	87	56.413	Mola_mola
ENSPTIG00000008791	TNRC6C	70	72.921	ENSMODG00000001785	TNRC6C	88	79.189	Monodelphis_domestica
ENSPTIG00000008791	TNRC6C	86	83.513	MGP_CAROLIEiJ_G0017465	Tnrc6c	90	83.513	Mus_caroli
ENSPTIG00000008791	TNRC6C	86	83.513	MGP_PahariEiJ_G0018593	Tnrc6c	90	83.513	Mus_pahari
ENSPTIG00000008791	TNRC6C	91	72.803	ENSMPUG00000013348	TNRC6C	89	77.482	Mustela_putorius_furo
ENSPTIG00000008791	TNRC6C	91	78.723	ENSMLUG00000014431	TNRC6C	89	72.837	Myotis_lucifugus
ENSPTIG00000008791	TNRC6C	91	82.632	ENSNGAG00000012203	Tnrc6c	90	76.867	Nannospalax_galili
ENSPTIG00000008791	TNRC6C	81	55.503	ENSNBRG00000005344	tnrc6c1	85	56.109	Neolamprologus_brichardi
ENSPTIG00000008791	TNRC6C	90	85.676	ENSNLEG00000000047	TNRC6C	88	85.676	Nomascus_leucogenys
ENSPTIG00000008791	TNRC6C	86	83.154	ENSMEUG00000005104	TNRC6C	76	64.422	Notamacropus_eugenii
ENSPTIG00000008791	TNRC6C	83	85.153	ENSODEG00000012499	TNRC6C	90	85.153	Octodon_degus
ENSPTIG00000008791	TNRC6C	72	55.319	ENSONIG00000002210	tnrc6c1	81	56.109	Oreochromis_niloticus
ENSPTIG00000008791	TNRC6C	91	73.418	ENSOANG00000009758	-	84	73.418	Ornithorhynchus_anatinus
ENSPTIG00000008791	TNRC6C	50	74.194	ENSOCUG00000006122	TNRC6C	88	69.682	Oryctolagus_cuniculus
ENSPTIG00000008791	TNRC6C	69	71.770	ENSOGAG00000007197	TNRC6C	90	86.900	Otolemur_garnettii
ENSPTIG00000008791	TNRC6C	81	96.131	ENSPPAG00000027160	TNRC6C	90	86.463	Pan_paniscus
ENSPTIG00000008791	TNRC6C	91	94.430	ENSPPRG00000018881	TNRC6C	90	92.576	Panthera_pardus
ENSPTIG00000008791	TNRC6C	68	96.429	ENSPTRG00000009699	TNRC6C	90	86.463	Pan_troglodytes
ENSPTIG00000008791	TNRC6C	81	96.429	ENSPANG00000019994	TNRC6C	90	85.590	Papio_anubis
ENSPTIG00000008791	TNRC6C	86	84.965	ENSPSIG00000018069	TNRC6C	90	84.946	Pelodiscus_sinensis
ENSPTIG00000008791	TNRC6C	80	73.333	ENSPMGG00000022911	tnrc6c1	98	37.361	Periophthalmus_magnuspinnatus
ENSPTIG00000008791	TNRC6C	89	92.593	ENSPEMG00000009785	Tnrc6c	90	84.716	Peromyscus_maniculatus_bairdii
ENSPTIG00000008791	TNRC6C	85	54.299	ENSPFOG00000012560	tnrc6c1	97	48.016	Poecilia_formosa
ENSPTIG00000008791	TNRC6C	72	54.417	ENSPLAG00000021055	tnrc6c1	84	54.535	Poecilia_latipinna
ENSPTIG00000008791	TNRC6C	89	86.667	ENSPPYG00000008679	TNRC6C	87	86.486	Pongo_abelii
ENSPTIG00000008791	TNRC6C	81	93.696	ENSPCAG00000012510	TNRC6C	84	93.696	Procavia_capensis
ENSPTIG00000008791	TNRC6C	69	76.194	ENSPCOG00000021451	TNRC6C	90	86.026	Propithecus_coquereli
ENSPTIG00000008791	TNRC6C	81	86.957	ENSPVAG00000002008	TNRC6C	86	86.957	Pteropus_vampyrus
ENSPTIG00000008791	TNRC6C	81	52.500	ENSPNYG00000014477	tnrc6c1	85	55.778	Pundamilia_nyererei
ENSPTIG00000008791	TNRC6C	69	74.769	ENSRNOG00000022395	Tnrc6c	90	81.304	Rattus_norvegicus
ENSPTIG00000008791	TNRC6C	81	96.726	ENSRBIG00000027777	TNRC6C	90	86.026	Rhinopithecus_bieti
ENSPTIG00000008791	TNRC6C	81	96.726	ENSRROG00000042912	TNRC6C	90	86.026	Rhinopithecus_roxellana
ENSPTIG00000008791	TNRC6C	68	86.133	ENSSBOG00000023981	TNRC6C	90	85.590	Saimiri_boliviensis_boliviensis
ENSPTIG00000008791	TNRC6C	87	39.916	ENSSFOG00015004735	-	83	66.216	Scleropages_formosus
ENSPTIG00000008791	TNRC6C	85	60.287	ENSSFOG00015006475	tnrc6c1	85	60.214	Scleropages_formosus
ENSPTIG00000008791	TNRC6C	81	53.964	ENSSMAG00000012761	tnrc6c1	87	57.479	Scophthalmus_maximus
ENSPTIG00000008791	TNRC6C	78	55.128	ENSSDUG00000002366	tnrc6c1	87	56.893	Seriola_dumerili
ENSPTIG00000008791	TNRC6C	68	54.888	ENSSLDG00000025613	tnrc6c1	81	56.619	Seriola_lalandi_dorsalis
ENSPTIG00000008791	TNRC6C	80	91.810	ENSSARG00000006816	TNRC6C	81	91.630	Sorex_araneus
ENSPTIG00000008791	TNRC6C	74	70.588	ENSSPUG00000007341	TNRC6C	89	70.588	Sphenodon_punctatus
ENSPTIG00000008791	TNRC6C	83	75.231	ENSSSCG00000034373	TNRC6C	90	75.901	Sus_scrofa
ENSPTIG00000008791	TNRC6C	69	72.361	ENSTGUG00000007733	TNRC6C	91	86.022	Taeniopygia_guttata
ENSPTIG00000008791	TNRC6C	72	53.699	ENSTRUG00000011685	tnrc6c1	85	55.071	Takifugu_rubripes
ENSPTIG00000008791	TNRC6C	87	42.764	ENSTNIG00000005273	tnrc6c1	86	53.499	Tetraodon_nigroviridis
ENSPTIG00000008791	TNRC6C	59	89.844	ENSTBEG00000005046	TNRC6C	93	89.844	Tupaia_belangeri
ENSPTIG00000008791	TNRC6C	86	86.364	ENSTTRG00000010828	TNRC6C	90	86.022	Tursiops_truncatus
ENSPTIG00000008791	TNRC6C	91	88.108	ENSUMAG00000013614	TNRC6C	91	80.714	Ursus_maritimus
ENSPTIG00000008791	TNRC6C	70	79.556	ENSVVUG00000015268	TNRC6C	90	86.900	Vulpes_vulpes
ENSPTIG00000008791	TNRC6C	83	81.301	ENSXETG00000019470	tnrc6c	91	77.293	Xenopus_tropicalis
ENSPTIG00000008791	TNRC6C	85	54.245	ENSXMAG00000025971	tnrc6c1	99	43.516	Xiphophorus_maculatus