EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000008867 (Gene tree)
Gene ID: 102949990
Gene Symbol: UPF2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 104585 bases
Position: chrKE721752.1:5090407-5194991
Accession: 102949990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000007143	Upf2	PF04050.14	4.8e-33	1	1
ENSPTIP00000007143	MIF4G	PF02854.19	3.2e-76	1	3
ENSPTIP00000007143	MIF4G	PF02854.19	3.2e-76	2	3
ENSPTIP00000007143	MIF4G	PF02854.19	3.2e-76	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000010981	UPF2-201	5735	XM_015537150	ENSPTIP00000007143	1271 (aa)	XP_015392636	UPI00042C22D1

Gene Model

Click here to download ENSPTIG00000008867's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03013	RNA transport	KEGG
ptg03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000008867's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000008867	UPF2	100	97.563	ENSG00000151461	UPF2	100	97.563	Homo_sapiens
ENSPTIG00000008867	UPF2	99	78.935	ENSAPOG00000015837	UPF2	100	78.778	Acanthochromis_polyacanthus
ENSPTIG00000008867	UPF2	100	99.371	ENSAMEG00000004586	UPF2	100	99.371	Ailuropoda_melanoleuca
ENSPTIG00000008867	UPF2	99	82.812	ENSACIG00000018078	UPF2	100	82.734	Amphilophus_citrinellus
ENSPTIG00000008867	UPF2	100	82.995	ENSAOCG00000016766	UPF2	100	83.073	Amphiprion_ocellaris
ENSPTIG00000008867	UPF2	100	83.073	ENSAPEG00000019084	UPF2	100	83.151	Amphiprion_percula
ENSPTIG00000008867	UPF2	100	82.815	ENSATEG00000021677	UPF2	99	82.866	Anabas_testudineus
ENSPTIG00000008867	UPF2	100	87.264	ENSAPLG00000010287	UPF2	90	92.007	Anas_platyrhynchos
ENSPTIG00000008867	UPF2	100	92.840	ENSACAG00000009259	UPF2	100	92.840	Anolis_carolinensis
ENSPTIG00000008867	UPF2	99	87.500	ENSANAG00000028451	UPF2	99	86.321	Aotus_nancymaae
ENSPTIG00000008867	UPF2	100	81.201	ENSACLG00000012696	UPF2	100	82.995	Astatotilapia_calliptera
ENSPTIG00000008867	UPF2	99	83.255	ENSAMXG00000013700	UPF2	99	83.646	Astyanax_mexicanus
ENSPTIG00000008867	UPF2	100	98.977	ENSBTAG00000000288	UPF2	100	98.977	Bos_taurus
ENSPTIG00000008867	UPF2	100	97.563	ENSCJAG00000020685	UPF2	100	97.563	Callithrix_jacchus
ENSPTIG00000008867	UPF2	100	99.371	ENSCAFG00000004839	UPF2	100	99.371	Canis_familiaris
ENSPTIG00000008867	UPF2	97	99.507	ENSCAFG00020005882	UPF2	98	99.308	Canis_lupus_dingo
ENSPTIG00000008867	UPF2	100	99.056	ENSCHIG00000020359	UPF2	100	99.056	Capra_hircus
ENSPTIG00000008867	UPF2	100	97.482	ENSTSYG00000000935	UPF2	100	97.482	Carlito_syrichta
ENSPTIG00000008867	UPF2	91	87.435	ENSCAPG00000016658	UPF2	94	87.058	Cavia_aperea
ENSPTIG00000008867	UPF2	99	95.956	ENSCPOG00000008809	UPF2	99	95.956	Cavia_porcellus
ENSPTIG00000008867	UPF2	100	91.345	ENSCCAG00000035991	UPF2	100	91.345	Cebus_capucinus
ENSPTIG00000008867	UPF2	100	97.720	ENSCATG00000032679	UPF2	100	97.720	Cercocebus_atys
ENSPTIG00000008867	UPF2	100	97.718	ENSCLAG00000011434	UPF2	100	97.718	Chinchilla_lanigera
ENSPTIG00000008867	UPF2	100	97.799	ENSCSAG00000013372	UPF2	100	97.799	Chlorocebus_sabaeus
ENSPTIG00000008867	UPF2	87	98.884	ENSCHOG00000000422	UPF2	89	98.884	Choloepus_hoffmanni
ENSPTIG00000008867	UPF2	99	92.435	ENSCPBG00000027823	UPF2	100	93.223	Chrysemys_picta_bellii
ENSPTIG00000008867	UPF2	79	48.865	ENSCSAVG00000007772	-	99	47.610	Ciona_savignyi
ENSPTIG00000008867	UPF2	99	91.406	ENSCANG00000040396	UPF2	100	91.975	Colobus_angolensis_palliatus
ENSPTIG00000008867	UPF2	100	97.954	ENSCGRG00001019347	Upf2	100	97.954	Cricetulus_griseus_chok1gshd
ENSPTIG00000008867	UPF2	100	97.954	ENSCGRG00000017993	Upf2	100	97.954	Cricetulus_griseus_crigri
ENSPTIG00000008867	UPF2	91	81.293	ENSCSEG00000003520	UPF2	91	80.429	Cynoglossus_semilaevis
ENSPTIG00000008867	UPF2	99	83.032	ENSCVAG00000006167	UPF2	100	82.482	Cyprinodon_variegatus
ENSPTIG00000008867	UPF2	100	98.584	ENSDNOG00000018160	UPF2	100	98.584	Dasypus_novemcinctus
ENSPTIG00000008867	UPF2	100	97.482	ENSDORG00000002478	Upf2	100	97.482	Dipodomys_ordii
ENSPTIG00000008867	UPF2	89	36.559	FBgn0029992	Upf2	82	43.860	Drosophila_melanogaster
ENSPTIG00000008867	UPF2	72	100.000	ENSETEG00000011583	-	66	100.000	Echinops_telfairi
ENSPTIG00000008867	UPF2	69	68.806	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSPTIG00000008867	UPF2	100	98.584	ENSEASG00005019274	UPF2	100	98.584	Equus_asinus_asinus
ENSPTIG00000008867	UPF2	100	98.662	ENSECAG00000017022	UPF2	100	98.662	Equus_caballus
ENSPTIG00000008867	UPF2	82	94.888	ENSEEUG00000007819	UPF2	82	94.888	Erinaceus_europaeus
ENSPTIG00000008867	UPF2	99	81.626	ENSELUG00000012014	UPF2	100	81.493	Esox_lucius
ENSPTIG00000008867	UPF2	100	100.000	ENSFCAG00000005785	UPF2	100	100.000	Felis_catus
ENSPTIG00000008867	UPF2	100	94.256	ENSFALG00000001889	UPF2	98	94.256	Ficedula_albicollis
ENSPTIG00000008867	UPF2	100	97.561	ENSFDAG00000014348	UPF2	100	97.561	Fukomys_damarensis
ENSPTIG00000008867	UPF2	99	83.478	ENSFHEG00000009826	UPF2	99	83.056	Fundulus_heteroclitus
ENSPTIG00000008867	UPF2	91	82.902	ENSGMOG00000005557	UPF2	91	83.635	Gadus_morhua
ENSPTIG00000008867	UPF2	100	94.261	ENSGALG00000033772	UPF2	100	94.261	Gallus_gallus
ENSPTIG00000008867	UPF2	100	80.109	ENSGAFG00000020867	UPF2	100	82.137	Gambusia_affinis
ENSPTIG00000008867	UPF2	90	84.469	ENSGACG00000001080	UPF2	100	82.266	Gasterosteus_aculeatus
ENSPTIG00000008867	UPF2	100	93.784	ENSGAGG00000002700	UPF2	100	93.784	Gopherus_agassizii
ENSPTIG00000008867	UPF2	100	97.563	ENSGGOG00000001479	UPF2	100	97.563	Gorilla_gorilla
ENSPTIG00000008867	UPF2	100	81.045	ENSHBUG00000004249	UPF2	100	82.969	Haplochromis_burtoni
ENSPTIG00000008867	UPF2	99	86.693	ENSHGLG00000003822	-	99	85.276	Heterocephalus_glaber_female
ENSPTIG00000008867	UPF2	100	97.718	ENSHGLG00000015176	-	100	97.718	Heterocephalus_glaber_female
ENSPTIG00000008867	UPF2	99	94.484	ENSHGLG00100010036	UPF2	89	98.383	Heterocephalus_glaber_male
ENSPTIG00000008867	UPF2	100	80.808	ENSHCOG00000004025	UPF2	99	80.808	Hippocampus_comes
ENSPTIG00000008867	UPF2	100	81.981	ENSIPUG00000015524	UPF2	100	82.279	Ictalurus_punctatus
ENSPTIG00000008867	UPF2	100	98.269	ENSSTOG00000013075	UPF2	100	98.269	Ictidomys_tridecemlineatus
ENSPTIG00000008867	UPF2	100	96.538	ENSJJAG00000004913	Upf2	100	96.538	Jaculus_jaculus
ENSPTIG00000008867	UPF2	92	84.851	ENSKMAG00000001071	UPF2	92	84.872	Kryptolebias_marmoratus
ENSPTIG00000008867	UPF2	80	83.006	ENSLBEG00000000728	-	93	83.104	Labrus_bergylta
ENSPTIG00000008867	UPF2	100	83.294	ENSLBEG00000016394	-	99	83.346	Labrus_bergylta
ENSPTIG00000008867	UPF2	99	79.702	ENSLACG00000015945	UPF2	100	79.937	Latimeria_chalumnae
ENSPTIG00000008867	UPF2	99	86.761	ENSLOCG00000015698	UPF2	100	86.682	Lepisosteus_oculatus
ENSPTIG00000008867	UPF2	100	97.642	ENSMFAG00000043865	UPF2	100	97.642	Macaca_fascicularis
ENSPTIG00000008867	UPF2	100	97.642	ENSMMUG00000008241	UPF2	100	97.642	Macaca_mulatta
ENSPTIG00000008867	UPF2	81	96.878	ENSMNEG00000008062	UPF2	100	96.878	Macaca_nemestrina
ENSPTIG00000008867	UPF2	95	99.275	ENSMLEG00000036120	UPF2	100	99.275	Mandrillus_leucophaeus
ENSPTIG00000008867	UPF2	100	82.504	ENSMAMG00000018276	UPF2	100	82.632	Mastacembelus_armatus
ENSPTIG00000008867	UPF2	100	81.201	ENSMZEG00005021595	UPF2	100	82.995	Maylandia_zebra
ENSPTIG00000008867	UPF2	99	93.627	ENSMGAG00000004573	UPF2	99	93.627	Meleagris_gallopavo
ENSPTIG00000008867	UPF2	100	95.594	ENSMAUG00000016512	Upf2	100	95.594	Mesocricetus_auratus
ENSPTIG00000008867	UPF2	99	93.459	ENSMICG00000001716	UPF2	100	93.459	Microcebus_murinus
ENSPTIG00000008867	UPF2	100	96.853	ENSMOCG00000008263	Upf2	100	96.853	Microtus_ochrogaster
ENSPTIG00000008867	UPF2	90	83.377	ENSMMOG00000006528	UPF2	100	79.515	Mola_mola
ENSPTIG00000008867	UPF2	100	96.302	ENSMODG00000016794	UPF2	100	96.302	Monodelphis_domestica
ENSPTIG00000008867	UPF2	99	82.486	ENSMALG00000002663	UPF2	100	82.616	Monopterus_albus
ENSPTIG00000008867	UPF2	100	97.404	MGP_CAROLIEiJ_G0023157	Upf2	100	98.341	Mus_caroli
ENSPTIG00000008867	UPF2	100	97.246	ENSMUSG00000043241	Upf2	100	97.246	Mus_musculus
ENSPTIG00000008867	UPF2	100	96.853	MGP_PahariEiJ_G0019217	Upf2	100	96.952	Mus_pahari
ENSPTIG00000008867	UPF2	100	97.482	MGP_SPRETEiJ_G0024075	Upf2	100	97.482	Mus_spretus
ENSPTIG00000008867	UPF2	100	99.213	ENSMPUG00000001064	UPF2	100	99.213	Mustela_putorius_furo
ENSPTIG00000008867	UPF2	99	98.036	ENSMLUG00000000228	UPF2	100	98.036	Myotis_lucifugus
ENSPTIG00000008867	UPF2	100	81.201	ENSNBRG00000013629	UPF2	100	82.995	Neolamprologus_brichardi
ENSPTIG00000008867	UPF2	100	97.563	ENSNLEG00000012058	UPF2	100	97.563	Nomascus_leucogenys
ENSPTIG00000008867	UPF2	56	97.927	ENSMEUG00000002180	-	54	97.927	Notamacropus_eugenii
ENSPTIG00000008867	UPF2	76	100.000	ENSOPRG00000006801	-	77	100.000	Ochotona_princeps
ENSPTIG00000008867	UPF2	100	97.246	ENSODEG00000001290	UPF2	100	97.246	Octodon_degus
ENSPTIG00000008867	UPF2	100	81.279	ENSONIG00000017991	UPF2	100	83.073	Oreochromis_niloticus
ENSPTIG00000008867	UPF2	99	97.414	ENSOCUG00000006230	UPF2	100	97.414	Oryctolagus_cuniculus
ENSPTIG00000008867	UPF2	100	81.790	ENSORLG00000017189	UPF2	100	82.293	Oryzias_latipes
ENSPTIG00000008867	UPF2	100	81.790	ENSORLG00020005969	UPF2	100	82.293	Oryzias_latipes_hni
ENSPTIG00000008867	UPF2	100	81.790	ENSORLG00015005713	UPF2	100	82.293	Oryzias_latipes_hsok
ENSPTIG00000008867	UPF2	99	78.315	ENSOMEG00000023420	UPF2	98	79.203	Oryzias_melastigma
ENSPTIG00000008867	UPF2	100	97.482	ENSOGAG00000005796	UPF2	100	97.482	Otolemur_garnettii
ENSPTIG00000008867	UPF2	100	98.900	ENSOARG00000014587	UPF2	100	98.900	Ovis_aries
ENSPTIG00000008867	UPF2	99	93.667	ENSPPAG00000037953	UPF2	100	94.331	Pan_paniscus
ENSPTIG00000008867	UPF2	100	100.000	ENSPPRG00000000690	UPF2	100	100.000	Panthera_pardus
ENSPTIG00000008867	UPF2	100	97.563	ENSPTRG00000002291	UPF2	100	97.563	Pan_troglodytes
ENSPTIG00000008867	UPF2	100	97.642	ENSPANG00000023399	UPF2	100	97.642	Papio_anubis
ENSPTIG00000008867	UPF2	100	82.137	ENSPKIG00000025502	UPF2	100	81.201	Paramormyrops_kingsleyae
ENSPTIG00000008867	UPF2	59	92.829	ENSPSIG00000015158	UPF2	95	92.829	Pelodiscus_sinensis
ENSPTIG00000008867	UPF2	99	81.068	ENSPMGG00000005259	UPF2	100	81.147	Periophthalmus_magnuspinnatus
ENSPTIG00000008867	UPF2	93	95.627	ENSPEMG00000015731	Upf2	99	95.627	Peromyscus_maniculatus_bairdii
ENSPTIG00000008867	UPF2	100	95.909	ENSPCIG00000006656	UPF2	100	95.909	Phascolarctos_cinereus
ENSPTIG00000008867	UPF2	100	80.265	ENSPFOG00000017118	UPF2	100	82.449	Poecilia_formosa
ENSPTIG00000008867	UPF2	100	80.265	ENSPLAG00000005094	UPF2	100	82.449	Poecilia_latipinna
ENSPTIG00000008867	UPF2	100	80.265	ENSPMEG00000017009	UPF2	100	82.449	Poecilia_mexicana
ENSPTIG00000008867	UPF2	99	80.266	ENSPREG00000021880	UPF2	100	82.616	Poecilia_reticulata
ENSPTIG00000008867	UPF2	66	99.163	ENSPPYG00000002089	-	100	99.163	Pongo_abelii
ENSPTIG00000008867	UPF2	100	84.107	ENSPCAG00000000684	UPF2	100	84.107	Procavia_capensis
ENSPTIG00000008867	UPF2	99	94.878	ENSPCOG00000021656	UPF2	100	94.878	Propithecus_coquereli
ENSPTIG00000008867	UPF2	100	91.116	ENSPVAG00000017286	UPF2	100	91.116	Pteropus_vampyrus
ENSPTIG00000008867	UPF2	99	78.750	ENSPNYG00000017096	UPF2	100	80.547	Pundamilia_nyererei
ENSPTIG00000008867	UPF2	100	83.463	ENSPNAG00000009357	UPF2	100	84.009	Pygocentrus_nattereri
ENSPTIG00000008867	UPF2	99	91.287	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSPTIG00000008867	UPF2	99	96.612	ENSRBIG00000037780	UPF2	100	96.612	Rhinopithecus_bieti
ENSPTIG00000008867	UPF2	100	97.563	ENSRROG00000043547	UPF2	100	97.563	Rhinopithecus_roxellana
ENSPTIG00000008867	UPF2	100	97.327	ENSSBOG00000020012	UPF2	100	97.327	Saimiri_boliviensis_boliviensis
ENSPTIG00000008867	UPF2	100	81.761	ENSSFOG00015023788	upf2	100	83.009	Scleropages_formosus
ENSPTIG00000008867	UPF2	90	82.827	ENSSMAG00000007637	UPF2	91	83.248	Scophthalmus_maximus
ENSPTIG00000008867	UPF2	100	82.995	ENSSDUG00000017244	UPF2	99	83.151	Seriola_dumerili
ENSPTIG00000008867	UPF2	99	81.519	ENSSLDG00000016866	UPF2	100	81.284	Seriola_lalandi_dorsalis
ENSPTIG00000008867	UPF2	100	96.302	ENSSARG00000008615	UPF2	100	96.302	Sorex_araneus
ENSPTIG00000008867	UPF2	99	91.102	ENSSPUG00000014544	UPF2	99	91.102	Sphenodon_punctatus
ENSPTIG00000008867	UPF2	68	98.849	ENSSSCG00000011117	-	100	98.849	Sus_scrofa
ENSPTIG00000008867	UPF2	99	94.243	ENSTGUG00000002163	-	100	94.243	Taeniopygia_guttata
ENSPTIG00000008867	UPF2	100	82.477	ENSTRUG00000007519	UPF2	99	82.449	Takifugu_rubripes
ENSPTIG00000008867	UPF2	93	90.178	ENSTBEG00000012679	UPF2	93	90.517	Tupaia_belangeri
ENSPTIG00000008867	UPF2	100	98.662	ENSTTRG00000016388	UPF2	100	98.662	Tursiops_truncatus
ENSPTIG00000008867	UPF2	94	100.000	ENSUAMG00000023560	UPF2	100	99.243	Ursus_americanus
ENSPTIG00000008867	UPF2	100	99.371	ENSUMAG00000012953	UPF2	95	99.371	Ursus_maritimus
ENSPTIG00000008867	UPF2	85	96.774	ENSVPAG00000006763	UPF2	86	96.774	Vicugna_pacos
ENSPTIG00000008867	UPF2	100	99.292	ENSVVUG00000006166	UPF2	100	99.292	Vulpes_vulpes
ENSPTIG00000008867	UPF2	100	83.333	ENSXETG00000033103	UPF2	91	89.023	Xenopus_tropicalis
ENSPTIG00000008867	UPF2	92	84.701	ENSXCOG00000011604	UPF2	100	82.109	Xiphophorus_couchianus
ENSPTIG00000008867	UPF2	100	80.109	ENSXMAG00000017209	UPF2	100	82.137	Xiphophorus_maculatus