EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000009281 (Gene tree)
Gene ID: 102959871
Gene Symbol: TARBP1
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 88625 bases
Position: chrKE721835.1:2974881-3063505
Accession: 102959871
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000007747	SpoU_methylase	PF00588.19	2.6e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000011605	TARBP1-201	4017	XM_015539230	ENSPTIP00000007747	1338 (aa)	XP_015394716	-

Gene Model

Click here to download ENSPTIG00000009281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000009281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000009281	TARBP1	99	86.012	ENSG00000059588	TARBP1	83	86.012	Homo_sapiens
ENSPTIG00000009281	TARBP1	99	44.865	ENSAPOG00000016419	si:dkey-85a20.4	83	44.865	Acanthochromis_polyacanthus
ENSPTIG00000009281	TARBP1	99	89.658	ENSAMEG00000003359	TARBP1	98	89.658	Ailuropoda_melanoleuca
ENSPTIG00000009281	TARBP1	99	44.971	ENSATEG00000020266	si:dkey-85a20.4	82	45.044	Anabas_testudineus
ENSPTIG00000009281	TARBP1	99	67.207	ENSAPLG00000007666	TARBP1	99	68.015	Anas_platyrhynchos
ENSPTIG00000009281	TARBP1	99	61.070	ENSACAG00000001142	TARBP1	84	61.070	Anolis_carolinensis
ENSPTIG00000009281	TARBP1	99	82.812	ENSANAG00000022031	TARBP1	85	82.812	Aotus_nancymaae
ENSPTIG00000009281	TARBP1	100	86.394	ENSBTAG00000004517	TARBP1	83	86.222	Bos_taurus
ENSPTIG00000009281	TARBP1	99	85.565	ENSCJAG00000018155	TARBP1	83	85.565	Callithrix_jacchus
ENSPTIG00000009281	TARBP1	100	89.993	ENSCAFG00000011533	TARBP1	95	90.327	Canis_familiaris
ENSPTIG00000009281	TARBP1	100	90.320	ENSCAFG00020027141	TARBP1	83	90.320	Canis_lupus_dingo
ENSPTIG00000009281	TARBP1	99	85.757	ENSCHIG00000011437	TARBP1	82	85.587	Capra_hircus
ENSPTIG00000009281	TARBP1	99	84.152	ENSTSYG00000010382	TARBP1	99	84.152	Carlito_syrichta
ENSPTIG00000009281	TARBP1	95	68.339	ENSCAPG00000010831	TARBP1	99	68.122	Cavia_aperea
ENSPTIG00000009281	TARBP1	99	77.703	ENSCPOG00000013995	TARBP1	84	77.546	Cavia_porcellus
ENSPTIG00000009281	TARBP1	99	85.938	ENSCCAG00000037278	TARBP1	83	85.938	Cebus_capucinus
ENSPTIG00000009281	TARBP1	99	85.565	ENSCATG00000011754	TARBP1	83	85.565	Cercocebus_atys
ENSPTIG00000009281	TARBP1	97	78.670	ENSCLAG00000003655	TARBP1	96	78.506	Chinchilla_lanigera
ENSPTIG00000009281	TARBP1	95	85.125	ENSCSAG00000010100	TARBP1	99	85.125	Chlorocebus_sabaeus
ENSPTIG00000009281	TARBP1	93	70.513	ENSCPBG00000005587	TARBP1	83	70.513	Chrysemys_picta_bellii
ENSPTIG00000009281	TARBP1	99	85.491	ENSCANG00000034343	TARBP1	99	85.491	Colobus_angolensis_palliatus
ENSPTIG00000009281	TARBP1	99	77.296	ENSCGRG00001016690	Tarbp1	85	77.296	Cricetulus_griseus_chok1gshd
ENSPTIG00000009281	TARBP1	99	77.296	ENSCGRG00000016893	Tarbp1	91	77.296	Cricetulus_griseus_crigri
ENSPTIG00000009281	TARBP1	99	41.883	ENSCSEG00000005255	si:dkey-85a20.4	82	41.883	Cynoglossus_semilaevis
ENSPTIG00000009281	TARBP1	99	46.450	ENSDARG00000079055	si:dkey-85a20.4	99	53.195	Danio_rerio
ENSPTIG00000009281	TARBP1	99	86.202	ENSDNOG00000008637	TARBP1	82	86.074	Dasypus_novemcinctus
ENSPTIG00000009281	TARBP1	96	73.323	ENSDORG00000007984	Tarbp1	100	73.323	Dipodomys_ordii
ENSPTIG00000009281	TARBP1	100	91.233	ENSEASG00005000252	TARBP1	84	90.370	Equus_asinus_asinus
ENSPTIG00000009281	TARBP1	100	90.558	ENSECAG00000023673	TARBP1	83	90.632	Equus_caballus
ENSPTIG00000009281	TARBP1	99	43.883	ENSELUG00000012193	si:dkey-85a20.4	83	43.883	Esox_lucius
ENSPTIG00000009281	TARBP1	100	95.749	ENSFCAG00000014183	TARBP1	82	95.749	Felis_catus
ENSPTIG00000009281	TARBP1	97	67.204	ENSFALG00000013565	TARBP1	99	67.125	Ficedula_albicollis
ENSPTIG00000009281	TARBP1	95	74.866	ENSFDAG00000001308	TARBP1	99	74.791	Fukomys_damarensis
ENSPTIG00000009281	TARBP1	99	37.482	ENSFHEG00000007565	si:dkey-85a20.4	76	52.958	Fundulus_heteroclitus
ENSPTIG00000009281	TARBP1	99	42.409	ENSGMOG00000004549	si:dkey-85a20.4	97	42.482	Gadus_morhua
ENSPTIG00000009281	TARBP1	99	60.608	ENSGALG00000011000	TARBP1	84	60.386	Gallus_gallus
ENSPTIG00000009281	TARBP1	99	44.575	ENSGAFG00000007387	si:dkey-85a20.4	82	44.696	Gambusia_affinis
ENSPTIG00000009281	TARBP1	99	44.672	ENSGACG00000005865	si:dkey-85a20.4	95	44.672	Gasterosteus_aculeatus
ENSPTIG00000009281	TARBP1	99	71.174	ENSGAGG00000012102	TARBP1	86	71.174	Gopherus_agassizii
ENSPTIG00000009281	TARBP1	99	83.073	ENSGGOG00000022879	TARBP1	98	82.999	Gorilla_gorilla
ENSPTIG00000009281	TARBP1	99	45.693	ENSHBUG00000008877	si:dkey-85a20.4	82	45.693	Haplochromis_burtoni
ENSPTIG00000009281	TARBP1	99	78.673	ENSHGLG00000011592	TARBP1	84	78.513	Heterocephalus_glaber_female
ENSPTIG00000009281	TARBP1	99	78.657	ENSHGLG00100015169	TARBP1	92	78.657	Heterocephalus_glaber_male
ENSPTIG00000009281	TARBP1	98	43.440	ENSIPUG00000005249	si:dkey-85a20.4	80	43.662	Ictalurus_punctatus
ENSPTIG00000009281	TARBP1	100	75.428	ENSSTOG00000032291	TARBP1	96	75.428	Ictidomys_tridecemlineatus
ENSPTIG00000009281	TARBP1	99	72.288	ENSJJAG00000017840	Tarbp1	92	72.288	Jaculus_jaculus
ENSPTIG00000009281	TARBP1	75	46.051	ENSKMAG00000017546	si:dkey-85a20.4	72	46.452	Kryptolebias_marmoratus
ENSPTIG00000009281	TARBP1	78	48.765	ENSLBEG00000012132	si:dkey-85a20.4	77	48.765	Labrus_bergylta
ENSPTIG00000009281	TARBP1	99	54.846	ENSLACG00000004337	TARBP1	82	54.886	Latimeria_chalumnae
ENSPTIG00000009281	TARBP1	99	49.963	ENSLOCG00000016214	si:dkey-85a20.4	82	49.963	Lepisosteus_oculatus
ENSPTIG00000009281	TARBP1	99	85.395	ENSLAFG00000011394	TARBP1	85	85.395	Loxodonta_africana
ENSPTIG00000009281	TARBP1	99	82.972	ENSMFAG00000041068	TARBP1	84	82.972	Macaca_fascicularis
ENSPTIG00000009281	TARBP1	99	82.898	ENSMMUG00000021703	TARBP1	83	82.898	Macaca_mulatta
ENSPTIG00000009281	TARBP1	99	85.565	ENSMNEG00000045002	TARBP1	83	85.565	Macaca_nemestrina
ENSPTIG00000009281	TARBP1	99	85.789	ENSMLEG00000044182	TARBP1	99	85.789	Mandrillus_leucophaeus
ENSPTIG00000009281	TARBP1	99	45.408	ENSMAMG00000021760	si:dkey-85a20.4	83	45.408	Mastacembelus_armatus
ENSPTIG00000009281	TARBP1	99	45.766	ENSMZEG00005005751	si:dkey-85a20.4	82	45.766	Maylandia_zebra
ENSPTIG00000009281	TARBP1	99	77.147	ENSMAUG00000020968	Tarbp1	85	77.147	Mesocricetus_auratus
ENSPTIG00000009281	TARBP1	99	76.155	ENSMICG00000015280	TARBP1	82	76.155	Microcebus_murinus
ENSPTIG00000009281	TARBP1	99	75.859	ENSMOCG00000004128	Tarbp1	85	75.859	Microtus_ochrogaster
ENSPTIG00000009281	TARBP1	99	43.333	ENSMMOG00000007795	si:dkey-85a20.4	82	43.481	Mola_mola
ENSPTIG00000009281	TARBP1	99	76.247	ENSMODG00000008504	TARBP1	81	76.247	Monodelphis_domestica
ENSPTIG00000009281	TARBP1	99	44.486	ENSMALG00000002916	si:dkey-85a20.4	82	44.486	Monopterus_albus
ENSPTIG00000009281	TARBP1	99	75.635	MGP_CAROLIEiJ_G0031729	Tarbp1	85	75.635	Mus_caroli
ENSPTIG00000009281	TARBP1	99	75.336	ENSMUSG00000090290	Tarbp1	85	75.336	Mus_musculus
ENSPTIG00000009281	TARBP1	100	75.204	MGP_PahariEiJ_G0023326	Tarbp1	85	75.204	Mus_pahari
ENSPTIG00000009281	TARBP1	100	74.944	MGP_SPRETEiJ_G0032846	Tarbp1	85	74.944	Mus_spretus
ENSPTIG00000009281	TARBP1	93	87.379	ENSMPUG00000002802	TARBP1	100	87.540	Mustela_putorius_furo
ENSPTIG00000009281	TARBP1	100	77.293	ENSMLUG00000002414	TARBP1	98	77.293	Myotis_lucifugus
ENSPTIG00000009281	TARBP1	99	86.086	ENSNLEG00000002518	TARBP1	83	86.086	Nomascus_leucogenys
ENSPTIG00000009281	TARBP1	61	77.119	ENSMEUG00000011370	-	50	77.119	Notamacropus_eugenii
ENSPTIG00000009281	TARBP1	80	85.572	ENSOPRG00000013822	TARBP1	66	85.572	Ochotona_princeps
ENSPTIG00000009281	TARBP1	99	78.151	ENSODEG00000005238	TARBP1	87	78.151	Octodon_degus
ENSPTIG00000009281	TARBP1	99	45.362	ENSONIG00000009789	si:dkey-85a20.4	96	45.362	Oreochromis_niloticus
ENSPTIG00000009281	TARBP1	99	84.552	ENSOCUG00000017418	TARBP1	82	84.552	Oryctolagus_cuniculus
ENSPTIG00000009281	TARBP1	99	43.580	ENSORLG00000010529	si:dkey-85a20.4	82	43.672	Oryzias_latipes
ENSPTIG00000009281	TARBP1	99	42.857	ENSORLG00020019264	si:dkey-85a20.4	82	42.951	Oryzias_latipes_hni
ENSPTIG00000009281	TARBP1	99	43.309	ENSORLG00015003276	si:dkey-85a20.4	82	43.402	Oryzias_latipes_hsok
ENSPTIG00000009281	TARBP1	99	82.204	ENSOGAG00000002379	TARBP1	83	82.204	Otolemur_garnettii
ENSPTIG00000009281	TARBP1	100	85.375	ENSOARG00000003434	TARBP1	89	85.207	Ovis_aries
ENSPTIG00000009281	TARBP1	99	86.012	ENSPPAG00000028097	TARBP1	99	86.012	Pan_paniscus
ENSPTIG00000009281	TARBP1	100	93.978	ENSPPRG00000013561	TARBP1	87	94.415	Panthera_pardus
ENSPTIG00000009281	TARBP1	99	85.863	ENSPTRG00000002124	TARBP1	83	85.863	Pan_troglodytes
ENSPTIG00000009281	TARBP1	99	85.938	ENSPANG00000021933	TARBP1	83	85.938	Papio_anubis
ENSPTIG00000009281	TARBP1	99	46.715	ENSPKIG00000016716	si:dkey-85a20.4	82	46.715	Paramormyrops_kingsleyae
ENSPTIG00000009281	TARBP1	95	69.129	ENSPSIG00000010699	TARBP1	99	69.129	Pelodiscus_sinensis
ENSPTIG00000009281	TARBP1	100	76.357	ENSPEMG00000006888	Tarbp1	89	76.357	Peromyscus_maniculatus_bairdii
ENSPTIG00000009281	TARBP1	90	83.010	ENSPCIG00000029710	TARBP1	81	83.010	Phascolarctos_cinereus
ENSPTIG00000009281	TARBP1	99	44.485	ENSPFOG00000013020	si:dkey-85a20.4	96	44.606	Poecilia_formosa
ENSPTIG00000009281	TARBP1	99	44.704	ENSPLAG00000006044	si:dkey-85a20.4	82	44.825	Poecilia_latipinna
ENSPTIG00000009281	TARBP1	99	44.704	ENSPMEG00000017857	si:dkey-85a20.4	82	44.825	Poecilia_mexicana
ENSPTIG00000009281	TARBP1	99	45.222	ENSPREG00000022753	si:dkey-85a20.4	82	45.342	Poecilia_reticulata
ENSPTIG00000009281	TARBP1	91	95.506	ENSPPYG00000000102	TARBP1	81	95.506	Pongo_abelii
ENSPTIG00000009281	TARBP1	83	87.662	ENSPCAG00000004808	TARBP1	69	87.662	Procavia_capensis
ENSPTIG00000009281	TARBP1	99	83.171	ENSPCOG00000005666	TARBP1	83	83.010	Propithecus_coquereli
ENSPTIG00000009281	TARBP1	99	69.099	ENSPVAG00000014798	TARBP1	84	69.099	Pteropus_vampyrus
ENSPTIG00000009281	TARBP1	99	44.526	ENSPNYG00000019135	si:dkey-85a20.4	82	44.526	Pundamilia_nyererei
ENSPTIG00000009281	TARBP1	99	70.777	ENSRNOG00000053574	Tarbp1	85	70.777	Rattus_norvegicus
ENSPTIG00000009281	TARBP1	99	79.686	ENSRBIG00000043362	TARBP1	91	79.686	Rhinopithecus_bieti
ENSPTIG00000009281	TARBP1	99	85.417	ENSRROG00000029527	TARBP1	86	85.417	Rhinopithecus_roxellana
ENSPTIG00000009281	TARBP1	99	85.342	ENSSBOG00000034503	TARBP1	96	85.342	Saimiri_boliviensis_boliviensis
ENSPTIG00000009281	TARBP1	99	75.259	ENSSHAG00000000013	TARBP1	99	75.259	Sarcophilus_harrisii
ENSPTIG00000009281	TARBP1	99	45.055	ENSSFOG00015002660	si:dkey-85a20.4	96	45.874	Scleropages_formosus
ENSPTIG00000009281	TARBP1	99	45.395	ENSSMAG00000007081	si:dkey-85a20.4	81	45.567	Scophthalmus_maximus
ENSPTIG00000009281	TARBP1	99	43.465	ENSSDUG00000023566	si:dkey-85a20.4	82	43.580	Seriola_dumerili
ENSPTIG00000009281	TARBP1	99	45.727	ENSSLDG00000020200	si:dkey-85a20.4	82	45.873	Seriola_lalandi_dorsalis
ENSPTIG00000009281	TARBP1	91	85.484	ENSSARG00000012207	TARBP1	76	85.484	Sorex_araneus
ENSPTIG00000009281	TARBP1	99	67.238	ENSSPUG00000015364	TARBP1	83	67.238	Sphenodon_punctatus
ENSPTIG00000009281	TARBP1	99	45.004	ENSSPAG00000007213	si:dkey-85a20.4	82	45.004	Stegastes_partitus
ENSPTIG00000009281	TARBP1	100	87.193	ENSSSCG00000010160	TARBP1	83	87.416	Sus_scrofa
ENSPTIG00000009281	TARBP1	97	66.921	ENSTGUG00000010214	TARBP1	100	66.921	Taeniopygia_guttata
ENSPTIG00000009281	TARBP1	99	43.405	ENSTNIG00000016586	si:dkey-85a20.4	98	43.529	Tetraodon_nigroviridis
ENSPTIG00000009281	TARBP1	91	94.382	ENSTTRG00000008707	TARBP1	79	94.382	Tursiops_truncatus
ENSPTIG00000009281	TARBP1	99	89.391	ENSUMAG00000006730	TARBP1	99	89.391	Ursus_maritimus
ENSPTIG00000009281	TARBP1	87	92.424	ENSVPAG00000007665	TARBP1	80	92.424	Vicugna_pacos
ENSPTIG00000009281	TARBP1	100	90.551	ENSVVUG00000007460	TARBP1	95	90.395	Vulpes_vulpes
ENSPTIG00000009281	TARBP1	99	55.129	ENSXETG00000016224	tarbp1	99	55.129	Xenopus_tropicalis
ENSPTIG00000009281	TARBP1	90	47.885	ENSXCOG00000011779	si:dkey-85a20.4	89	47.885	Xiphophorus_couchianus
ENSPTIG00000009281	TARBP1	78	42.711	ENSXMAG00000009600	si:dkey-85a20.4	100	42.711	Xiphophorus_maculatus