EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTIG00000009795 (Gene tree)
Gene ID
102969195
Gene Symbol
PUF60
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Panthera_tigris_altaica
Status
putative
Strand
Plus strand
Length
11952 bases
Position
chrKE721967.1:685247-697198
Accession
102969195
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTIP00000008512RRM_1PF00076.221.8e-4312
ENSPTIP00000008512RRM_1PF00076.221.8e-4322
ENSPTIP00000008487RRM_1PF00076.224.9e-4312
ENSPTIP00000008487RRM_1PF00076.224.9e-4322
ENSPTIP00000008480RRM_1PF00076.226.5e-4312
ENSPTIP00000008480RRM_1PF00076.226.5e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTIT00000012363PUF60-2012354-ENSPTIP00000008480696 (aa)--
ENSPTIT00000012371PUF60-2022237XM_007091528ENSPTIP00000008487657 (aa)XP_007091590UPI00042BE617
ENSPTIT00000012395PUF60-2031572-ENSPTIP00000008512523 (aa)--
Gene Model
Click here to download ENSPTIG00000009795's gene model file
Pathways
Pathway IDPathway NameSource
ptg03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000009795's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTIG00000009795PUF606235.294ENSPTIG00000005489U2AF25637.255
ENSPTIG00000009795PUF605330.233ENSPTIG00000021083PABPC15030.233
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTIG00000009795PUF609996.935ENSG00000179950PUF6010098.998Homo_sapiens
ENSPTIG00000009795PUF609983.112ENSAPOG00000001713puf60b9984.736Acanthochromis_polyacanthus
ENSPTIG00000009795PUF609995.402ENSAMEG00000006406PUF609994.022Ailuropoda_melanoleuca
ENSPTIG00000009795PUF609875.096ENSACIG00000003263-9975.763Amphilophus_citrinellus
ENSPTIG00000009795PUF609883.109ENSACIG00000021705puf60b10083.109Amphilophus_citrinellus
ENSPTIG00000009795PUF609983.112ENSAOCG00000005395puf60b10083.877Amphiprion_ocellaris
ENSPTIG00000009795PUF609979.096ENSAOCG00000015558-9979.924Amphiprion_ocellaris
ENSPTIG00000009795PUF609980.497ENSAPEG00000011923puf60b9982.387Amphiprion_percula
ENSPTIG00000009795PUF609873.308ENSAPEG00000001836-9976.471Amphiprion_percula
ENSPTIG00000009795PUF609983.112ENSATEG00000001730puf60b9983.112Anabas_testudineus
ENSPTIG00000009795PUF609978.679ENSATEG00000006303-9979.096Anabas_testudineus
ENSPTIG00000009795PUF609995.785ENSAPLG00000010150PUF6010095.785Anas_platyrhynchos
ENSPTIG00000009795PUF609993.893ENSACAG00000001645PUF609793.893Anolis_carolinensis
ENSPTIG00000009795PUF609996.935ENSANAG00000018626PUF609899.010Aotus_nancymaae
ENSPTIG00000009795PUF609883.109ENSACLG00000004462puf60b10084.722Astatotilapia_calliptera
ENSPTIG00000009795PUF609982.792ENSAMXG00000036570puf60a9784.344Astyanax_mexicanus
ENSPTIG00000009795PUF609874.206ENSAMXG00000041030puf60b10075.775Astyanax_mexicanus
ENSPTIG00000009795PUF609997.126ENSBTAG00000037493PUF609998.327Bos_taurus
ENSPTIG00000009795PUF607950.338WBGene00004389rnp-68353.497Caenorhabditis_elegans
ENSPTIG00000009795PUF609997.126ENSCJAG00000021485PUF609997.963Callithrix_jacchus
ENSPTIG00000009795PUF609997.318ENSCAFG00000001400PUF609998.881Canis_familiaris
ENSPTIG00000009795PUF609997.318ENSCAFG00020018754PUF609998.881Canis_lupus_dingo
ENSPTIG00000009795PUF609997.126ENSCHIG00000001618PUF609592.995Capra_hircus
ENSPTIG00000009795PUF609997.876ENSTSYG00000011912PUF6010097.287Carlito_syrichta
ENSPTIG00000009795PUF609991.445ENSCPOG00000014613PUF609992.593Cavia_porcellus
ENSPTIG00000009795PUF609996.935ENSCCAG00000007744PUF609997.959Cebus_capucinus
ENSPTIG00000009795PUF609996.935ENSCATG00000035405PUF609998.692Cercocebus_atys
ENSPTIG00000009795PUF609997.126ENSCLAG00000009154PUF609997.963Chinchilla_lanigera
ENSPTIG00000009795PUF609896.899ENSCSAG00000008878PUF6010096.899Chlorocebus_sabaeus
ENSPTIG00000009795PUF609995.785ENSCPBG00000005595PUF609895.785Chrysemys_picta_bellii
ENSPTIG00000009795PUF606260.299ENSCING00000002156-8762.733Ciona_intestinalis
ENSPTIG00000009795PUF609949.067ENSCING00000008436-9849.057Ciona_intestinalis
ENSPTIG00000009795PUF609550.000ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSPTIG00000009795PUF609654.580ENSCSAVG00000001385-9954.913Ciona_savignyi
ENSPTIG00000009795PUF608095.704ENSCANG00000041843PUF6010098.621Colobus_angolensis_palliatus
ENSPTIG00000009795PUF609996.552ENSCGRG00001017442Puf609997.407Cricetulus_griseus_chok1gshd
ENSPTIG00000009795PUF609996.552ENSCGRG00000003717Puf609993.728Cricetulus_griseus_crigri
ENSPTIG00000009795PUF609972.106ENSCSEG00000014845-8976.877Cynoglossus_semilaevis
ENSPTIG00000009795PUF609982.543ENSCSEG00000019887puf60b9382.353Cynoglossus_semilaevis
ENSPTIG00000009795PUF608680.482ENSCVAG00000001560-9380.531Cyprinodon_variegatus
ENSPTIG00000009795PUF609882.342ENSCVAG00000009386puf60b10085.119Cyprinodon_variegatus
ENSPTIG00000009795PUF609876.880ENSDARG00000001241puf60b9993.976Danio_rerio
ENSPTIG00000009795PUF609884.470ENSDARG00000032175puf60a9988.936Danio_rerio
ENSPTIG00000009795PUF609681.854ENSDNOG00000043278PUF609978.136Dasypus_novemcinctus
ENSPTIG00000009795PUF609997.126ENSDORG00000004585Puf6010099.064Dipodomys_ordii
ENSPTIG00000009795PUF609549.135FBgn0028577hfp9948.925Drosophila_melanogaster
ENSPTIG00000009795PUF609961.616ENSEBUG00000014291puf60b8466.434Eptatretus_burgeri
ENSPTIG00000009795PUF609670.400ENSEBUG00000005470-8872.016Eptatretus_burgeri
ENSPTIG00000009795PUF609997.318ENSEASG00005009695PUF609998.881Equus_asinus_asinus
ENSPTIG00000009795PUF609997.318ENSECAG00000024681PUF609998.881Equus_caballus
ENSPTIG00000009795PUF609981.179ENSELUG00000006507puf60b9979.026Esox_lucius
ENSPTIG00000009795PUF6010081.869ENSELUG00000018443-9985.207Esox_lucius
ENSPTIG00000009795PUF609997.701ENSFCAG00000001045PUF6010097.674Felis_catus
ENSPTIG00000009795PUF609983.142ENSFALG00000001136PUF609884.321Ficedula_albicollis
ENSPTIG00000009795PUF609996.743ENSFDAG00000017177PUF609997.593Fukomys_damarensis
ENSPTIG00000009795PUF609981.973ENSFHEG00000020046puf60b10085.516Fundulus_heteroclitus
ENSPTIG00000009795PUF609477.355ENSFHEG00000021687PUF6010078.208Fundulus_heteroclitus
ENSPTIG00000009795PUF609969.303ENSGMOG00000006392puf60b10070.270Gadus_morhua
ENSPTIG00000009795PUF606594.477ENSGALG00000039901PUF609494.477Gallus_gallus
ENSPTIG00000009795PUF609877.692ENSGAFG00000004334-9978.643Gambusia_affinis
ENSPTIG00000009795PUF609981.214ENSGAFG00000021040puf60b10083.301Gambusia_affinis
ENSPTIG00000009795PUF609971.078ENSGACG00000004717puf60b9870.398Gasterosteus_aculeatus
ENSPTIG00000009795PUF609868.919ENSGACG00000001484-10067.625Gasterosteus_aculeatus
ENSPTIG00000009795PUF609995.785ENSGAGG00000013289PUF609297.822Gopherus_agassizii
ENSPTIG00000009795PUF609996.935ENSGGOG00000004646PUF609998.692Gorilla_gorilla
ENSPTIG00000009795PUF609880.658ENSHBUG00000009634-10081.944Haplochromis_burtoni
ENSPTIG00000009795PUF609982.353ENSHBUG00000015118puf60b10084.722Haplochromis_burtoni
ENSPTIG00000009795PUF609996.743ENSHGLG00000006111PUF609997.593Heterocephalus_glaber_female
ENSPTIG00000009795PUF609996.743ENSHGLG00100012362PUF609997.593Heterocephalus_glaber_male
ENSPTIG00000009795PUF609879.926ENSHCOG00000015541puf60b10080.952Hippocampus_comes
ENSPTIG00000009795PUF609665.490ENSHCOG00000000378-9964.353Hippocampus_comes
ENSPTIG00000009795PUF609876.504ENSIPUG00000004660puf60b9977.821Ictalurus_punctatus
ENSPTIG00000009795PUF609979.619ENSIPUG00000002453puf60a9981.871Ictalurus_punctatus
ENSPTIG00000009795PUF609997.126ENSSTOG00000025037PUF609995.652Ictidomys_tridecemlineatus
ENSPTIG00000009795PUF609996.935ENSJJAG00000001076Puf609998.141Jaculus_jaculus
ENSPTIG00000009795PUF609882.726ENSKMAG00000016745puf60b10083.877Kryptolebias_marmoratus
ENSPTIG00000009795PUF609876.648ENSKMAG00000010106-10076.648Kryptolebias_marmoratus
ENSPTIG00000009795PUF609983.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSPTIG00000009795PUF606990.685ENSLACG00000005456PUF6010090.164Latimeria_chalumnae
ENSPTIG00000009795PUF6010087.170ENSLOCG00000010106puf60b9986.038Lepisosteus_oculatus
ENSPTIG00000009795PUF609995.594ENSLAFG00000022929PUF609993.309Loxodonta_africana
ENSPTIG00000009795PUF609996.935ENSMFAG00000043373PUF609998.692Macaca_fascicularis
ENSPTIG00000009795PUF609996.935ENSMMUG00000013558PUF609998.507Macaca_mulatta
ENSPTIG00000009795PUF609996.935ENSMNEG00000031099PUF609998.692Macaca_nemestrina
ENSPTIG00000009795PUF609896.899ENSMLEG00000040009PUF6010098.998Mandrillus_leucophaeus
ENSPTIG00000009795PUF609980.075ENSMAMG00000019476-9979.737Mastacembelus_armatus
ENSPTIG00000009795PUF609982.453ENSMAMG00000010394puf60b10081.308Mastacembelus_armatus
ENSPTIG00000009795PUF609883.109ENSMZEG00005018515puf60b10084.722Maylandia_zebra
ENSPTIG00000009795PUF609979.550ENSMZEG00005019425-9979.550Maylandia_zebra
ENSPTIG00000009795PUF609995.429ENSMGAG00000013070PUF609995.611Meleagris_gallopavo
ENSPTIG00000009795PUF609481.633ENSMAUG00000018549-9781.744Mesocricetus_auratus
ENSPTIG00000009795PUF606995.628ENSMAUG00000014267-9896.875Mesocricetus_auratus
ENSPTIG00000009795PUF609997.318ENSMICG00000012226PUF609997.318Microcebus_murinus
ENSPTIG00000009795PUF609996.743ENSMOCG00000018780Puf609997.593Microtus_ochrogaster
ENSPTIG00000009795PUF609973.025ENSMMOG00000018059-9977.397Mola_mola
ENSPTIG00000009795PUF609883.493ENSMMOG00000004217puf60b10083.493Mola_mola
ENSPTIG00000009795PUF609996.718ENSMODG00000009161PUF609997.196Monodelphis_domestica
ENSPTIG00000009795PUF609978.195ENSMALG00000000200-9976.866Monopterus_albus
ENSPTIG00000009795PUF609975.522ENSMALG00000006797puf60b9975.522Monopterus_albus
ENSPTIG00000009795PUF609996.552MGP_CAROLIEiJ_G0019910Puf609997.407Mus_caroli
ENSPTIG00000009795PUF609996.552ENSMUSG00000002524Puf609997.407Mus_musculus
ENSPTIG00000009795PUF609996.552MGP_PahariEiJ_G0019920Puf609997.407Mus_pahari
ENSPTIG00000009795PUF609996.552MGP_SPRETEiJ_G0020812Puf609997.407Mus_spretus
ENSPTIG00000009795PUF609996.935ENSMPUG00000008137PUF609895.118Mustela_putorius_furo
ENSPTIG00000009795PUF6010091.969ENSMLUG00000013032-9894.851Myotis_lucifugus
ENSPTIG00000009795PUF609996.169ENSMLUG00000000238-9994.575Myotis_lucifugus
ENSPTIG00000009795PUF609996.935ENSNGAG00000000712Puf6010096.899Nannospalax_galili
ENSPTIG00000009795PUF6010079.588ENSNBRG00000017223-9979.699Neolamprologus_brichardi
ENSPTIG00000009795PUF608378.982ENSNBRG00000013047puf60b9781.412Neolamprologus_brichardi
ENSPTIG00000009795PUF609996.935ENSNLEG00000002156PUF609998.692Nomascus_leucogenys
ENSPTIG00000009795PUF607395.563ENSOPRG00000002147PUF607595.563Ochotona_princeps
ENSPTIG00000009795PUF6072100.000ENSODEG00000014024-98100.000Octodon_degus
ENSPTIG00000009795PUF609671.906ENSODEG00000015513-9670.520Octodon_degus
ENSPTIG00000009795PUF609982.353ENSONIG00000006247puf60b9981.439Oreochromis_niloticus
ENSPTIG00000009795PUF609980.151ENSONIG00000014030-9979.167Oreochromis_niloticus
ENSPTIG00000009795PUF609775.775ENSOANG00000006962PUF609975.775Ornithorhynchus_anatinus
ENSPTIG00000009795PUF609982.543ENSORLG00000012279puf60b10082.726Oryzias_latipes
ENSPTIG00000009795PUF609876.981ENSORLG00000028655-9977.083Oryzias_latipes
ENSPTIG00000009795PUF609982.543ENSORLG00020007333puf6010082.726Oryzias_latipes_hni
ENSPTIG00000009795PUF609976.493ENSORLG00020018144-9976.592Oryzias_latipes_hni
ENSPTIG00000009795PUF609981.664ENSORLG00015007718puf60b10082.600Oryzias_latipes_hsok
ENSPTIG00000009795PUF609877.127ENSORLG00015016833-9877.230Oryzias_latipes_hsok
ENSPTIG00000009795PUF609978.011ENSOMEG00000022185-9977.486Oryzias_melastigma
ENSPTIG00000009795PUF609980.112ENSOMEG00000001643puf60b10081.944Oryzias_melastigma
ENSPTIG00000009795PUF609997.126ENSOGAG00000006259PUF609996.007Otolemur_garnettii
ENSPTIG00000009795PUF609994.818ENSOARG00000016235PUF609994.798Ovis_aries
ENSPTIG00000009795PUF609996.935ENSPPAG00000029933PUF609998.692Pan_paniscus
ENSPTIG00000009795PUF609997.701ENSPPRG00000003257PUF6010099.800Panthera_pardus
ENSPTIG00000009795PUF609996.743ENSPTRG00000020670PUF609998.505Pan_troglodytes
ENSPTIG00000009795PUF609996.743ENSPTRG00000043963-9998.321Pan_troglodytes
ENSPTIG00000009795PUF609996.935ENSPANG00000021936PUF609998.692Papio_anubis
ENSPTIG00000009795PUF6010082.836ENSPKIG00000004295puf60a9988.596Paramormyrops_kingsleyae
ENSPTIG00000009795PUF6010084.557ENSPKIG00000012204puf60b10085.769Paramormyrops_kingsleyae
ENSPTIG00000009795PUF609995.594ENSPSIG00000004679PUF609995.594Pelodiscus_sinensis
ENSPTIG00000009795PUF609882.061ENSPMGG00000013444puf60b9982.061Periophthalmus_magnuspinnatus
ENSPTIG00000009795PUF609996.743ENSPEMG00000008820Puf609997.593Peromyscus_maniculatus_bairdii
ENSPTIG00000009795PUF609997.126ENSPCIG00000020270PUF609996.929Phascolarctos_cinereus
ENSPTIG00000009795PUF609981.973ENSPFOG00000019217puf60b10084.630Poecilia_formosa
ENSPTIG00000009795PUF609977.736ENSPFOG00000011118-9978.302Poecilia_formosa
ENSPTIG00000009795PUF609977.966ENSPLAG00000017025-9277.925Poecilia_latipinna
ENSPTIG00000009795PUF609882.726ENSPLAG00000010754puf60b10085.516Poecilia_latipinna
ENSPTIG00000009795PUF609977.736ENSPMEG00000009767-9278.302Poecilia_mexicana
ENSPTIG00000009795PUF609981.973ENSPMEG00000000838puf60b10085.516Poecilia_mexicana
ENSPTIG00000009795PUF609880.658ENSPREG00000005440puf60b10083.730Poecilia_reticulata
ENSPTIG00000009795PUF607994.484ENSPPYG00000018951-9594.484Pongo_abelii
ENSPTIG00000009795PUF607996.403ENSPCAG00000014837PUF6010096.403Procavia_capensis
ENSPTIG00000009795PUF609997.126ENSPCOG00000027981PUF609997.126Propithecus_coquereli
ENSPTIG00000009795PUF609898.851ENSPVAG00000016167PUF608198.851Pteropus_vampyrus
ENSPTIG00000009795PUF609883.109ENSPNYG00000002556puf60b10083.109Pundamilia_nyererei
ENSPTIG00000009795PUF609979.550ENSPNYG00000004273-9979.550Pundamilia_nyererei
ENSPTIG00000009795PUF609982.824ENSPNAG00000019909puf60a9984.375Pygocentrus_nattereri
ENSPTIG00000009795PUF609878.077ENSPNAG00000019415puf60b9079.406Pygocentrus_nattereri
ENSPTIG00000009795PUF609996.552ENSRNOG00000009960Puf609997.407Rattus_norvegicus
ENSPTIG00000009795PUF609996.935ENSRBIG00000035274PUF609998.692Rhinopithecus_bieti
ENSPTIG00000009795PUF609996.935ENSRROG00000029360PUF609998.692Rhinopithecus_roxellana
ENSPTIG00000009795PUF609995.977ENSSBOG00000027089PUF609897.266Saimiri_boliviensis_boliviensis
ENSPTIG00000009795PUF608996.170ENSSHAG00000006668PUF609593.000Sarcophilus_harrisii
ENSPTIG00000009795PUF6010078.995ENSSFOG00015019371puf60a9885.312Scleropages_formosus
ENSPTIG00000009795PUF609880.038ENSSFOG00015019619puf60b9984.008Scleropages_formosus
ENSPTIG00000009795PUF607288.693ENSSMAG00000016381puf60b7688.963Scophthalmus_maximus
ENSPTIG00000009795PUF609977.694ENSSDUG00000007048-9878.113Seriola_dumerili
ENSPTIG00000009795PUF609981.227ENSSDUG00000009935puf60b10081.746Seriola_dumerili
ENSPTIG00000009795PUF609983.270ENSSLDG00000024011puf60b10081.682Seriola_lalandi_dorsalis
ENSPTIG00000009795PUF609881.071ENSSLDG00000007366-9981.262Seriola_lalandi_dorsalis
ENSPTIG00000009795PUF606585.088ENSSPUG00000013518PUF609485.088Sphenodon_punctatus
ENSPTIG00000009795PUF609980.407ENSSPAG00000012144puf60b10081.682Stegastes_partitus
ENSPTIG00000009795PUF609880.306ENSSPAG00000020285-10080.608Stegastes_partitus
ENSPTIG00000009795PUF609996.935ENSSSCG00000038800PUF609899.010Sus_scrofa
ENSPTIG00000009795PUF609992.529ENSTGUG00000012797-10092.529Taeniopygia_guttata
ENSPTIG00000009795PUF609877.734ENSTRUG00000008843-10080.160Takifugu_rubripes
ENSPTIG00000009795PUF609981.973ENSTRUG00000005420puf60b10080.561Takifugu_rubripes
ENSPTIG00000009795PUF609981.973ENSTNIG00000013675puf60b10080.871Tetraodon_nigroviridis
ENSPTIG00000009795PUF609976.099ENSTNIG00000003069-10075.526Tetraodon_nigroviridis
ENSPTIG00000009795PUF607381.503ENSTBEG00000001899-10081.214Tupaia_belangeri
ENSPTIG00000009795PUF605795.946ENSTBEG00000002751-9995.932Tupaia_belangeri
ENSPTIG00000009795PUF609896.512ENSTTRG00000017088PUF6010096.512Tursiops_truncatus
ENSPTIG00000009795PUF609997.318ENSUAMG00000024917PUF609998.879Ursus_americanus
ENSPTIG00000009795PUF609992.337ENSUMAG00000000272PUF609990.054Ursus_maritimus
ENSPTIG00000009795PUF609997.318ENSVVUG00000022527PUF609998.879Vulpes_vulpes
ENSPTIG00000009795PUF609992.115ENSXETG00000012469puf609994.246Xenopus_tropicalis
ENSPTIG00000009795PUF609882.398ENSXCOG00000012355puf60b10085.516Xiphophorus_couchianus
ENSPTIG00000009795PUF609878.405ENSXMAG00000010507-9979.568Xiphophorus_maculatus
ENSPTIG00000009795PUF609981.973ENSXMAG00000001862puf60b10083.877Xiphophorus_maculatus

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