EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000009887 (Gene tree)
Gene ID: 102953838
Gene Symbol: RNPC3
Alias: -
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 27590 bases
Position: chrKE722055.1:1042288-1069877
Accession: 102953838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000008592	RRM_1	PF00076.22	7e-18	1	2
ENSPTIP00000008592	RRM_1	PF00076.22	7e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000012478	RNPC3-201	2243	XM_007093612	ENSPTIP00000008592	507 (aa)	XP_007093674	UPI00042C2279

Gene Model

Click here to download ENSPTIG00000009887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000009887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000009887	RNPC3	100	93.307	ENSG00000185946	RNPC3	98	93.307	Homo_sapiens
ENSPTIG00000009887	RNPC3	97	56.740	ENSAPOG00000017371	rnpc3	97	56.740	Acanthochromis_polyacanthus
ENSPTIG00000009887	RNPC3	100	97.250	ENSAMEG00000001694	RNPC3	98	97.250	Ailuropoda_melanoleuca
ENSPTIG00000009887	RNPC3	97	53.293	ENSACIG00000021043	rnpc3	98	53.094	Amphilophus_citrinellus
ENSPTIG00000009887	RNPC3	97	56.200	ENSAOCG00000014052	rnpc3	96	56.200	Amphiprion_ocellaris
ENSPTIG00000009887	RNPC3	97	56.000	ENSAPEG00000008739	rnpc3	96	56.000	Amphiprion_percula
ENSPTIG00000009887	RNPC3	98	53.937	ENSATEG00000021263	rnpc3	98	53.937	Anabas_testudineus
ENSPTIG00000009887	RNPC3	89	70.897	ENSAPLG00000015605	RNPC3	99	71.772	Anas_platyrhynchos
ENSPTIG00000009887	RNPC3	97	67.944	ENSACAG00000002029	RNPC3	97	68.047	Anolis_carolinensis
ENSPTIG00000009887	RNPC3	100	92.717	ENSANAG00000019950	RNPC3	98	92.717	Aotus_nancymaae
ENSPTIG00000009887	RNPC3	96	54.675	ENSACLG00000014702	rnpc3	96	54.675	Astatotilapia_calliptera
ENSPTIG00000009887	RNPC3	96	57.959	ENSAMXG00000033372	rnpc3	96	57.959	Astyanax_mexicanus
ENSPTIG00000009887	RNPC3	100	93.701	ENSBTAG00000019091	RNPC3	98	93.701	Bos_taurus
ENSPTIG00000009887	RNPC3	100	88.189	ENSCJAG00000035686	RNPC3	98	88.583	Callithrix_jacchus
ENSPTIG00000009887	RNPC3	100	97.244	ENSCAFG00000019972	RNPC3	98	97.244	Canis_familiaris
ENSPTIG00000009887	RNPC3	100	97.441	ENSCAFG00020011300	RNPC3	98	97.441	Canis_lupus_dingo
ENSPTIG00000009887	RNPC3	100	93.504	ENSCHIG00000020361	RNPC3	98	93.504	Capra_hircus
ENSPTIG00000009887	RNPC3	99	90.693	ENSTSYG00000030256	RNPC3	98	90.693	Carlito_syrichta
ENSPTIG00000009887	RNPC3	86	79.405	ENSCAPG00000013600	RNPC3	99	78.261	Cavia_aperea
ENSPTIG00000009887	RNPC3	100	90.551	ENSCPOG00000031638	RNPC3	98	90.551	Cavia_porcellus
ENSPTIG00000009887	RNPC3	100	92.520	ENSCCAG00000024301	RNPC3	98	92.520	Cebus_capucinus
ENSPTIG00000009887	RNPC3	99	71.344	ENSCATG00000035930	-	99	70.356	Cercocebus_atys
ENSPTIG00000009887	RNPC3	99	92.885	ENSCATG00000002086	RNPC3	98	92.885	Cercocebus_atys
ENSPTIG00000009887	RNPC3	100	89.349	ENSCLAG00000005169	RNPC3	98	87.968	Chinchilla_lanigera
ENSPTIG00000009887	RNPC3	99	92.688	ENSCSAG00000001519	RNPC3	98	92.688	Chlorocebus_sabaeus
ENSPTIG00000009887	RNPC3	97	71.026	ENSCPBG00000028311	RNPC3	95	71.026	Chrysemys_picta_bellii
ENSPTIG00000009887	RNPC3	96	37.598	ENSCING00000021276	-	100	37.598	Ciona_intestinalis
ENSPTIG00000009887	RNPC3	94	37.681	ENSCSAVG00000002800	-	74	61.667	Ciona_savignyi
ENSPTIG00000009887	RNPC3	99	92.688	ENSCANG00000031444	RNPC3	98	92.688	Colobus_angolensis_palliatus
ENSPTIG00000009887	RNPC3	99	89.723	ENSCGRG00001019276	Rnpc3	98	89.723	Cricetulus_griseus_chok1gshd
ENSPTIG00000009887	RNPC3	89	90.022	ENSCGRG00000000053	Rnpc3	100	90.022	Cricetulus_griseus_crigri
ENSPTIG00000009887	RNPC3	96	54.858	ENSCSEG00000013475	rnpc3	96	54.786	Cynoglossus_semilaevis
ENSPTIG00000009887	RNPC3	97	53.891	ENSCVAG00000002645	rnpc3	99	54.207	Cyprinodon_variegatus
ENSPTIG00000009887	RNPC3	97	55.773	ENSDARG00000011247	rnpc3	99	63.441	Danio_rerio
ENSPTIG00000009887	RNPC3	100	93.294	ENSDNOG00000047498	-	98	93.294	Dasypus_novemcinctus
ENSPTIG00000009887	RNPC3	100	93.688	ENSDNOG00000044555	-	98	93.688	Dasypus_novemcinctus
ENSPTIG00000009887	RNPC3	99	90.730	ENSDORG00000027343	Rnpc3	98	90.730	Dipodomys_ordii
ENSPTIG00000009887	RNPC3	96	48.538	ENSEBUG00000002068	rnpc3	97	49.020	Eptatretus_burgeri
ENSPTIG00000009887	RNPC3	100	93.898	ENSEASG00005015957	RNPC3	98	93.898	Equus_asinus_asinus
ENSPTIG00000009887	RNPC3	100	93.898	ENSECAG00000021148	RNPC3	98	93.898	Equus_caballus
ENSPTIG00000009887	RNPC3	98	54.264	ENSELUG00000002264	rnpc3	97	51.816	Esox_lucius
ENSPTIG00000009887	RNPC3	100	99.211	ENSFCAG00000024312	RNPC3	98	99.211	Felis_catus
ENSPTIG00000009887	RNPC3	89	72.687	ENSFALG00000002580	RNPC3	99	73.206	Ficedula_albicollis
ENSPTIG00000009887	RNPC3	99	90.730	ENSFDAG00000019948	RNPC3	98	90.730	Fukomys_damarensis
ENSPTIG00000009887	RNPC3	96	51.215	ENSFHEG00000020647	rnpc3	96	50.295	Fundulus_heteroclitus
ENSPTIG00000009887	RNPC3	96	54.637	ENSGMOG00000019213	rnpc3	95	53.768	Gadus_morhua
ENSPTIG00000009887	RNPC3	97	73.333	ENSGALG00000005162	RNPC3	89	72.727	Gallus_gallus
ENSPTIG00000009887	RNPC3	97	53.267	ENSGAFG00000017236	rnpc3	98	53.280	Gambusia_affinis
ENSPTIG00000009887	RNPC3	96	54.709	ENSGACG00000002048	rnpc3	96	55.090	Gasterosteus_aculeatus
ENSPTIG00000009887	RNPC3	97	71.026	ENSGAGG00000008438	RNPC3	95	71.227	Gopherus_agassizii
ENSPTIG00000009887	RNPC3	99	75.148	ENSGGOG00000026201	-	98	74.853	Gorilla_gorilla
ENSPTIG00000009887	RNPC3	80	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSPTIG00000009887	RNPC3	100	90.354	ENSHGLG00000001708	RNPC3	98	90.354	Heterocephalus_glaber_female
ENSPTIG00000009887	RNPC3	100	90.354	ENSHGLG00100003005	RNPC3	98	90.354	Heterocephalus_glaber_male
ENSPTIG00000009887	RNPC3	97	54.527	ENSHCOG00000017135	rnpc3	97	54.527	Hippocampus_comes
ENSPTIG00000009887	RNPC3	99	56.420	ENSIPUG00000002916	rnpc3	99	55.405	Ictalurus_punctatus
ENSPTIG00000009887	RNPC3	99	91.304	ENSSTOG00000025020	RNPC3	98	90.945	Ictidomys_tridecemlineatus
ENSPTIG00000009887	RNPC3	97	88.595	ENSJJAG00000010203	Rnpc3	99	88.166	Jaculus_jaculus
ENSPTIG00000009887	RNPC3	97	55.645	ENSKMAG00000017358	rnpc3	98	55.050	Kryptolebias_marmoratus
ENSPTIG00000009887	RNPC3	97	55.289	ENSLBEG00000024901	rnpc3	95	55.289	Labrus_bergylta
ENSPTIG00000009887	RNPC3	96	61.866	ENSLACG00000005720	RNPC3	90	62.575	Latimeria_chalumnae
ENSPTIG00000009887	RNPC3	97	57.927	ENSLOCG00000007986	rnpc3	97	59.959	Lepisosteus_oculatus
ENSPTIG00000009887	RNPC3	97	92.121	ENSLAFG00000032342	RNPC3	98	91.700	Loxodonta_africana
ENSPTIG00000009887	RNPC3	99	67.850	ENSMFAG00000002917	-	99	67.194	Macaca_fascicularis
ENSPTIG00000009887	RNPC3	99	92.688	ENSMFAG00000002004	RNPC3	98	92.688	Macaca_fascicularis
ENSPTIG00000009887	RNPC3	99	92.688	ENSMMUG00000018039	RNPC3	98	92.688	Macaca_mulatta
ENSPTIG00000009887	RNPC3	83	84.651	ENSMMUG00000002098	-	91	84.651	Macaca_mulatta
ENSPTIG00000009887	RNPC3	99	63.636	ENSMNEG00000029209	-	99	66.469	Macaca_nemestrina
ENSPTIG00000009887	RNPC3	99	87.747	ENSMNEG00000033950	RNPC3	98	87.747	Macaca_nemestrina
ENSPTIG00000009887	RNPC3	99	92.885	ENSMLEG00000033628	RNPC3	98	92.885	Mandrillus_leucophaeus
ENSPTIG00000009887	RNPC3	99	70.117	ENSMLEG00000034644	-	98	67.118	Mandrillus_leucophaeus
ENSPTIG00000009887	RNPC3	97	51.683	ENSMAMG00000007496	rnpc3	97	50.482	Mastacembelus_armatus
ENSPTIG00000009887	RNPC3	99	52.399	ENSMZEG00005020233	rnpc3	97	53.479	Maylandia_zebra
ENSPTIG00000009887	RNPC3	89	72.308	ENSMGAG00000006381	RNPC3	99	72.527	Meleagris_gallopavo
ENSPTIG00000009887	RNPC3	98	90.763	ENSMAUG00000001358	Rnpc3	98	89.723	Mesocricetus_auratus
ENSPTIG00000009887	RNPC3	99	93.294	ENSMICG00000029591	RNPC3	98	93.294	Microcebus_murinus
ENSPTIG00000009887	RNPC3	98	89.579	ENSMOCG00000013423	Rnpc3	98	88.735	Microtus_ochrogaster
ENSPTIG00000009887	RNPC3	97	51.417	ENSMMOG00000005309	rnpc3	97	51.400	Mola_mola
ENSPTIG00000009887	RNPC3	99	78.698	ENSMODG00000002946	RNPC3	98	78.698	Monodelphis_domestica
ENSPTIG00000009887	RNPC3	98	52.569	ENSMALG00000015471	rnpc3	98	52.778	Monopterus_albus
ENSPTIG00000009887	RNPC3	99	87.945	MGP_CAROLIEiJ_G0025555	Rnpc3	99	87.945	Mus_caroli
ENSPTIG00000009887	RNPC3	99	88.340	ENSMUSG00000027981	Rnpc3	99	88.553	Mus_musculus
ENSPTIG00000009887	RNPC3	99	88.735	MGP_PahariEiJ_G0027001	Rnpc3	99	88.735	Mus_pahari
ENSPTIG00000009887	RNPC3	99	87.747	MGP_SPRETEiJ_G0026505	Rnpc3	99	87.747	Mus_spretus
ENSPTIG00000009887	RNPC3	100	96.252	ENSMPUG00000007349	RNPC3	98	96.252	Mustela_putorius_furo
ENSPTIG00000009887	RNPC3	99	90.335	ENSMLUG00000028743	RNPC3	98	90.335	Myotis_lucifugus
ENSPTIG00000009887	RNPC3	99	89.546	ENSNGAG00000010939	Rnpc3	98	89.546	Nannospalax_galili
ENSPTIG00000009887	RNPC3	96	54.472	ENSNBRG00000012196	rnpc3	93	54.472	Neolamprologus_brichardi
ENSPTIG00000009887	RNPC3	100	92.899	ENSNLEG00000012013	RNPC3	98	92.899	Nomascus_leucogenys
ENSPTIG00000009887	RNPC3	100	88.757	ENSODEG00000007612	RNPC3	98	88.757	Octodon_degus
ENSPTIG00000009887	RNPC3	96	54.878	ENSONIG00000004770	rnpc3	99	54.878	Oreochromis_niloticus
ENSPTIG00000009887	RNPC3	92	78.925	ENSOANG00000008220	RNPC3	99	79.785	Ornithorhynchus_anatinus
ENSPTIG00000009887	RNPC3	100	91.142	ENSOCUG00000004016	RNPC3	98	91.142	Oryctolagus_cuniculus
ENSPTIG00000009887	RNPC3	97	53.722	ENSORLG00000005694	rnpc3	97	53.722	Oryzias_latipes
ENSPTIG00000009887	RNPC3	97	54.234	ENSORLG00020005513	rnpc3	97	54.234	Oryzias_latipes_hni
ENSPTIG00000009887	RNPC3	97	53.831	ENSORLG00015002179	rnpc3	97	53.831	Oryzias_latipes_hsok
ENSPTIG00000009887	RNPC3	97	54.343	ENSOMEG00000017737	rnpc3	97	55.444	Oryzias_melastigma
ENSPTIG00000009887	RNPC3	100	93.110	ENSOGAG00000026182	RNPC3	98	93.110	Otolemur_garnettii
ENSPTIG00000009887	RNPC3	100	93.307	ENSOARG00000018719	RNPC3	98	93.307	Ovis_aries
ENSPTIG00000009887	RNPC3	100	92.927	ENSPPAG00000037459	RNPC3	98	92.927	Pan_paniscus
ENSPTIG00000009887	RNPC3	100	75.591	ENSPPAG00000030278	-	98	75.835	Pan_paniscus
ENSPTIG00000009887	RNPC3	100	100.000	ENSPPRG00000020246	RNPC3	98	100.000	Panthera_pardus
ENSPTIG00000009887	RNPC3	100	93.110	ENSPTRG00000033902	RNPC3	98	93.110	Pan_troglodytes
ENSPTIG00000009887	RNPC3	100	75.197	ENSPTRG00000044227	-	98	75.197	Pan_troglodytes
ENSPTIG00000009887	RNPC3	99	92.673	ENSPANG00000012137	RNPC3	98	92.673	Papio_anubis
ENSPTIG00000009887	RNPC3	99	73.477	ENSPANG00000029957	-	100	72.603	Papio_anubis
ENSPTIG00000009887	RNPC3	97	53.571	ENSPKIG00000008828	rnpc3	95	52.250	Paramormyrops_kingsleyae
ENSPTIG00000009887	RNPC3	64	69.880	ENSPSIG00000007396	RNPC3	99	68.373	Pelodiscus_sinensis
ENSPTIG00000009887	RNPC3	95	51.822	ENSPMGG00000011742	rnpc3	96	52.227	Periophthalmus_magnuspinnatus
ENSPTIG00000009887	RNPC3	90	89.035	ENSPEMG00000020112	Rnpc3	100	89.800	Peromyscus_maniculatus_bairdii
ENSPTIG00000009887	RNPC3	98	46.272	ENSPMAG00000003778	rnpc3	98	46.374	Petromyzon_marinus
ENSPTIG00000009887	RNPC3	99	78.895	ENSPCIG00000004415	-	98	78.895	Phascolarctos_cinereus
ENSPTIG00000009887	RNPC3	97	53.400	ENSPFOG00000009895	rnpc3	97	53.400	Poecilia_formosa
ENSPTIG00000009887	RNPC3	97	53.200	ENSPLAG00000012023	rnpc3	97	53.200	Poecilia_latipinna
ENSPTIG00000009887	RNPC3	97	53.600	ENSPMEG00000003663	rnpc3	97	53.600	Poecilia_mexicana
ENSPTIG00000009887	RNPC3	97	53.400	ENSPREG00000010206	rnpc3	98	53.400	Poecilia_reticulata
ENSPTIG00000009887	RNPC3	84	89.412	ENSPPYG00000001102	RNPC3	97	89.412	Pongo_abelii
ENSPTIG00000009887	RNPC3	96	54.472	ENSPNYG00000020603	rnpc3	96	54.472	Pundamilia_nyererei
ENSPTIG00000009887	RNPC3	97	55.268	ENSPNAG00000000524	rnpc3	89	55.467	Pygocentrus_nattereri
ENSPTIG00000009887	RNPC3	99	88.142	ENSRNOG00000017310	Rnpc3	98	88.142	Rattus_norvegicus
ENSPTIG00000009887	RNPC3	99	87.377	ENSRBIG00000043897	RNPC3	98	87.377	Rhinopithecus_bieti
ENSPTIG00000009887	RNPC3	99	93.281	ENSRROG00000032334	RNPC3	98	93.281	Rhinopithecus_roxellana
ENSPTIG00000009887	RNPC3	100	91.716	ENSSBOG00000024473	RNPC3	98	91.716	Saimiri_boliviensis_boliviensis
ENSPTIG00000009887	RNPC3	99	79.290	ENSSHAG00000011859	RNPC3	98	79.290	Sarcophilus_harrisii
ENSPTIG00000009887	RNPC3	97	60.200	ENSSFOG00015013055	rnpc3	99	58.171	Scleropages_formosus
ENSPTIG00000009887	RNPC3	98	52.456	ENSSMAG00000020346	rnpc3	97	51.830	Scophthalmus_maximus
ENSPTIG00000009887	RNPC3	96	54.509	ENSSDUG00000006600	rnpc3	96	54.582	Seriola_dumerili
ENSPTIG00000009887	RNPC3	96	55.000	ENSSLDG00000007979	rnpc3	96	55.000	Seriola_lalandi_dorsalis
ENSPTIG00000009887	RNPC3	98	65.800	ENSSPUG00000003872	-	93	65.800	Sphenodon_punctatus
ENSPTIG00000009887	RNPC3	97	71.862	ENSSPUG00000008539	-	95	71.400	Sphenodon_punctatus
ENSPTIG00000009887	RNPC3	97	55.578	ENSSPAG00000005633	rnpc3	97	56.187	Stegastes_partitus
ENSPTIG00000009887	RNPC3	100	93.688	ENSSSCG00000037254	RNPC3	98	92.702	Sus_scrofa
ENSPTIG00000009887	RNPC3	89	71.965	ENSTGUG00000004795	-	99	71.082	Taeniopygia_guttata
ENSPTIG00000009887	RNPC3	97	55.689	ENSTNIG00000018963	rnpc3	97	55.689	Tetraodon_nigroviridis
ENSPTIG00000009887	RNPC3	100	97.835	ENSUMAG00000007775	RNPC3	100	97.835	Ursus_maritimus
ENSPTIG00000009887	RNPC3	100	97.441	ENSVVUG00000000331	RNPC3	98	97.441	Vulpes_vulpes
ENSPTIG00000009887	RNPC3	98	51.779	ENSXETG00000025027	rnpc3	98	51.779	Xenopus_tropicalis
ENSPTIG00000009887	RNPC3	97	52.827	ENSXCOG00000005013	rnpc3	98	51.423	Xiphophorus_couchianus
ENSPTIG00000009887	RNPC3	97	53.571	ENSXMAG00000006495	rnpc3	98	53.557	Xiphophorus_maculatus