EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000009922 (Gene tree)
Gene ID: 102970857
Gene Symbol: CSTF2
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 23405 bases
Position: chrKE722093.1:125827-149231
Accession: 102970857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000008615	RRM_1	PF00076.22	1.8e-22	1	1
ENSPTIP00000008611	RRM_1	PF00076.22	1.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000012503	CSTF2-202	2009	XM_007094073	ENSPTIP00000008615	577 (aa)	XP_007094135	UPI00042BF929
ENSPTIT00000012498	CSTF2-201	2069	XM_007094072	ENSPTIP00000008611	597 (aa)	XP_007094134	UPI00042BB059

Gene Model

Click here to download ENSPTIG00000009922's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000009922's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000009922	CSTF2	99	69.391	ENSPTIG00000021145	CSTF2T	99	68.910

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000009922	CSTF2	100	96.650	ENSG00000101811	CSTF2	100	96.650	Homo_sapiens
ENSPTIG00000009922	CSTF2	99	59.145	ENSAPOG00000005630	cstf2	97	59.222	Acanthochromis_polyacanthus
ENSPTIG00000009922	CSTF2	100	97.351	ENSAMEG00000002082	CSTF2	100	97.351	Ailuropoda_melanoleuca
ENSPTIG00000009922	CSTF2	84	81.818	ENSACIG00000012852	cstf2	96	57.639	Amphilophus_citrinellus
ENSPTIG00000009922	CSTF2	99	60.104	ENSAOCG00000020905	cstf2	97	59.391	Amphiprion_ocellaris
ENSPTIG00000009922	CSTF2	99	60.104	ENSAPEG00000006526	cstf2	97	59.391	Amphiprion_percula
ENSPTIG00000009922	CSTF2	99	57.315	ENSATEG00000018186	cstf2	96	58.632	Anabas_testudineus
ENSPTIG00000009922	CSTF2	97	78.608	ENSAPLG00000007255	CSTF2	98	78.319	Anas_platyrhynchos
ENSPTIG00000009922	CSTF2	100	95.841	ENSANAG00000022342	CSTF2	100	95.841	Aotus_nancymaae
ENSPTIG00000009922	CSTF2	86	84.038	ENSAMXG00000021477	cstf2	96	95.238	Astyanax_mexicanus
ENSPTIG00000009922	CSTF2	100	96.360	ENSBTAG00000003547	CSTF2	100	96.360	Bos_taurus
ENSPTIG00000009922	CSTF2	100	95.980	ENSCJAG00000004422	CSTF2	100	95.980	Callithrix_jacchus
ENSPTIG00000009922	CSTF2	100	97.574	ENSCAFG00000017551	CSTF2	100	97.574	Canis_familiaris
ENSPTIG00000009922	CSTF2	100	97.655	ENSCAFG00020007619	CSTF2	100	97.655	Canis_lupus_dingo
ENSPTIG00000009922	CSTF2	100	96.707	ENSCHIG00000016994	CSTF2	100	96.707	Capra_hircus
ENSPTIG00000009922	CSTF2	100	96.985	ENSTSYG00000006529	CSTF2	100	96.985	Carlito_syrichta
ENSPTIG00000009922	CSTF2	100	94.640	ENSCPOG00000015255	CSTF2	100	94.640	Cavia_porcellus
ENSPTIG00000009922	CSTF2	100	95.980	ENSCCAG00000032975	CSTF2	100	95.980	Cebus_capucinus
ENSPTIG00000009922	CSTF2	100	96.482	ENSCATG00000022835	CSTF2	100	96.482	Cercocebus_atys
ENSPTIG00000009922	CSTF2	100	95.142	ENSCLAG00000001904	CSTF2	100	95.142	Chinchilla_lanigera
ENSPTIG00000009922	CSTF2	100	96.650	ENSCSAG00000010360	CSTF2	100	96.650	Chlorocebus_sabaeus
ENSPTIG00000009922	CSTF2	68	98.742	ENSCHOG00000012803	CSTF2	75	98.742	Choloepus_hoffmanni
ENSPTIG00000009922	CSTF2	100	76.361	ENSCPBG00000014293	CSTF2	100	76.117	Chrysemys_picta_bellii
ENSPTIG00000009922	CSTF2	100	96.650	ENSCANG00000030612	CSTF2	100	96.650	Colobus_angolensis_palliatus
ENSPTIG00000009922	CSTF2	100	91.379	ENSCGRG00001023023	Cstf2	100	91.379	Cricetulus_griseus_chok1gshd
ENSPTIG00000009922	CSTF2	100	88.448	ENSCGRG00000003897	Cstf2	100	88.448	Cricetulus_griseus_crigri
ENSPTIG00000009922	CSTF2	87	82.158	ENSCVAG00000005731	cstf2	96	60.035	Cyprinodon_variegatus
ENSPTIG00000009922	CSTF2	72	96.364	ENSDARG00000090788	cstf2	93	90.625	Danio_rerio
ENSPTIG00000009922	CSTF2	100	91.192	ENSDORG00000007195	Cstf2	100	91.192	Dipodomys_ordii
ENSPTIG00000009922	CSTF2	73	94.595	ENSETEG00000004931	CSTF2	68	94.595	Echinops_telfairi
ENSPTIG00000009922	CSTF2	100	97.487	ENSEASG00005001216	CSTF2	100	97.487	Equus_asinus_asinus
ENSPTIG00000009922	CSTF2	100	97.487	ENSECAG00000009325	CSTF2	100	97.487	Equus_caballus
ENSPTIG00000009922	CSTF2	100	99.497	ENSFCAG00000007000	CSTF2	100	99.497	Felis_catus
ENSPTIG00000009922	CSTF2	92	77.482	ENSFALG00000003859	CSTF2	100	77.837	Ficedula_albicollis
ENSPTIG00000009922	CSTF2	100	95.147	ENSFDAG00000002416	CSTF2	100	95.147	Fukomys_damarensis
ENSPTIG00000009922	CSTF2	99	59.965	ENSFHEG00000017065	cstf2	93	60.239	Fundulus_heteroclitus
ENSPTIG00000009922	CSTF2	99	58.352	ENSGMOG00000005145	cstf2	99	56.747	Gadus_morhua
ENSPTIG00000009922	CSTF2	100	78.840	ENSGALG00000006760	CSTF2	100	83.000	Gallus_gallus
ENSPTIG00000009922	CSTF2	99	55.766	ENSGACG00000017326	cstf2	93	81.633	Gasterosteus_aculeatus
ENSPTIG00000009922	CSTF2	100	78.309	ENSGAGG00000006037	CSTF2	100	78.199	Gopherus_agassizii
ENSPTIG00000009922	CSTF2	100	96.650	ENSGGOG00000022267	CSTF2	100	96.650	Gorilla_gorilla
ENSPTIG00000009922	CSTF2	100	95.321	ENSHGLG00000000659	-	100	95.321	Heterocephalus_glaber_female
ENSPTIG00000009922	CSTF2	100	80.589	ENSHGLG00000013455	-	100	80.589	Heterocephalus_glaber_female
ENSPTIG00000009922	CSTF2	100	80.763	ENSHGLG00100015391	-	100	80.763	Heterocephalus_glaber_male
ENSPTIG00000009922	CSTF2	100	95.321	ENSHGLG00100001130	-	100	95.321	Heterocephalus_glaber_male
ENSPTIG00000009922	CSTF2	84	81.148	ENSHCOG00000005157	cstf2	97	59.691	Hippocampus_comes
ENSPTIG00000009922	CSTF2	73	69.575	ENSIPUG00000017839	cstf2	99	60.066	Ictalurus_punctatus
ENSPTIG00000009922	CSTF2	100	94.974	ENSSTOG00000023445	CSTF2	100	94.974	Ictidomys_tridecemlineatus
ENSPTIG00000009922	CSTF2	100	92.894	ENSJJAG00000020507	Cstf2	100	92.894	Jaculus_jaculus
ENSPTIG00000009922	CSTF2	84	80.000	ENSKMAG00000001068	cstf2	96	58.864	Kryptolebias_marmoratus
ENSPTIG00000009922	CSTF2	54	93.220	ENSLBEG00000028720	cstf2	83	87.500	Labrus_bergylta
ENSPTIG00000009922	CSTF2	99	68.249	ENSLACG00000015927	CSTF2	99	67.317	Latimeria_chalumnae
ENSPTIG00000009922	CSTF2	98	77.778	ENSLOCG00000015300	cstf2	93	64.444	Lepisosteus_oculatus
ENSPTIG00000009922	CSTF2	100	92.462	ENSLAFG00000000474	CSTF2	100	92.462	Loxodonta_africana
ENSPTIG00000009922	CSTF2	100	96.650	ENSMFAG00000043888	CSTF2	100	96.650	Macaca_fascicularis
ENSPTIG00000009922	CSTF2	100	95.812	ENSMMUG00000013008	CSTF2	100	95.812	Macaca_mulatta
ENSPTIG00000009922	CSTF2	100	96.650	ENSMNEG00000041824	CSTF2	100	96.650	Macaca_nemestrina
ENSPTIG00000009922	CSTF2	100	96.650	ENSMLEG00000036870	CSTF2	100	96.650	Mandrillus_leucophaeus
ENSPTIG00000009922	CSTF2	82	78.970	ENSMAMG00000020364	cstf2	96	59.083	Mastacembelus_armatus
ENSPTIG00000009922	CSTF2	93	68.220	ENSMGAG00000004139	CSTF2	100	82.072	Meleagris_gallopavo
ENSPTIG00000009922	CSTF2	100	91.552	ENSMAUG00000000965	Cstf2	100	91.552	Mesocricetus_auratus
ENSPTIG00000009922	CSTF2	100	95.310	ENSMICG00000014121	CSTF2	100	95.310	Microcebus_murinus
ENSPTIG00000009922	CSTF2	100	90.345	ENSMOCG00000008081	Cstf2	100	90.345	Microtus_ochrogaster
ENSPTIG00000009922	CSTF2	84	91.282	ENSMMOG00000000538	cstf2	97	54.188	Mola_mola
ENSPTIG00000009922	CSTF2	100	80.231	ENSMODG00000011785	CSTF2	100	82.343	Monodelphis_domestica
ENSPTIG00000009922	CSTF2	100	91.552	MGP_CAROLIEiJ_G0033383	Cstf2	100	91.552	Mus_caroli
ENSPTIG00000009922	CSTF2	100	91.552	ENSMUSG00000031256	Cstf2	100	91.552	Mus_musculus
ENSPTIG00000009922	CSTF2	100	91.537	MGP_PahariEiJ_G0031923	Cstf2	100	91.710	Mus_pahari
ENSPTIG00000009922	CSTF2	100	91.552	MGP_SPRETEiJ_G0034548	Cstf2	100	91.552	Mus_spretus
ENSPTIG00000009922	CSTF2	100	92.540	ENSMPUG00000002339	CSTF2	100	92.540	Mustela_putorius_furo
ENSPTIG00000009922	CSTF2	100	90.461	ENSMLUG00000004598	CSTF2	98	90.461	Myotis_lucifugus
ENSPTIG00000009922	CSTF2	100	92.919	ENSNGAG00000021985	Cstf2	100	93.092	Nannospalax_galili
ENSPTIG00000009922	CSTF2	92	62.315	ENSNBRG00000021694	cstf2	100	54.930	Neolamprologus_brichardi
ENSPTIG00000009922	CSTF2	100	96.985	ENSNLEG00000007510	CSTF2	100	96.985	Nomascus_leucogenys
ENSPTIG00000009922	CSTF2	91	79.087	ENSMEUG00000014025	-	100	80.798	Notamacropus_eugenii
ENSPTIG00000009922	CSTF2	100	77.643	ENSMEUG00000007875	-	100	78.856	Notamacropus_eugenii
ENSPTIG00000009922	CSTF2	100	81.976	ENSMEUG00000011186	-	100	84.055	Notamacropus_eugenii
ENSPTIG00000009922	CSTF2	87	80.357	ENSOPRG00000003106	CSTF2	87	80.357	Ochotona_princeps
ENSPTIG00000009922	CSTF2	100	94.107	ENSODEG00000002059	CSTF2	100	94.107	Octodon_degus
ENSPTIG00000009922	CSTF2	99	54.448	ENSONIG00000002631	cstf2	99	55.963	Oreochromis_niloticus
ENSPTIG00000009922	CSTF2	94	98.214	ENSOANG00000004208	CSTF2	76	82.341	Ornithorhynchus_anatinus
ENSPTIG00000009922	CSTF2	100	93.588	ENSOCUG00000010468	CSTF2	100	93.588	Oryctolagus_cuniculus
ENSPTIG00000009922	CSTF2	86	79.668	ENSORLG00000001380	cstf2	97	57.607	Oryzias_latipes
ENSPTIG00000009922	CSTF2	86	80.083	ENSORLG00020021917	cstf2	97	57.607	Oryzias_latipes_hni
ENSPTIG00000009922	CSTF2	86	79.668	ENSORLG00015011996	cstf2	97	57.607	Oryzias_latipes_hsok
ENSPTIG00000009922	CSTF2	83	80.498	ENSOMEG00000015507	cstf2	97	58.874	Oryzias_melastigma
ENSPTIG00000009922	CSTF2	100	90.461	ENSOGAG00000011192	CSTF2	100	89.348	Otolemur_garnettii
ENSPTIG00000009922	CSTF2	100	96.707	ENSOARG00000001022	CSTF2	100	96.707	Ovis_aries
ENSPTIG00000009922	CSTF2	100	96.650	ENSPPAG00000031804	CSTF2	100	96.650	Pan_paniscus
ENSPTIG00000009922	CSTF2	100	99.665	ENSPPRG00000022492	CSTF2	100	99.665	Panthera_pardus
ENSPTIG00000009922	CSTF2	100	96.650	ENSPTRG00000022090	CSTF2	100	96.650	Pan_troglodytes
ENSPTIG00000009922	CSTF2	100	96.650	ENSPANG00000002303	CSTF2	100	96.650	Papio_anubis
ENSPTIG00000009922	CSTF2	99	62.017	ENSPKIG00000005033	cstf2	97	60.312	Paramormyrops_kingsleyae
ENSPTIG00000009922	CSTF2	84	80.913	ENSPMGG00000006534	cstf2	97	58.592	Periophthalmus_magnuspinnatus
ENSPTIG00000009922	CSTF2	100	90.690	ENSPEMG00000019415	Cstf2	100	90.690	Peromyscus_maniculatus_bairdii
ENSPTIG00000009922	CSTF2	100	80.952	ENSPCIG00000002989	CSTF2	100	82.266	Phascolarctos_cinereus
ENSPTIG00000009922	CSTF2	85	79.518	ENSPLAG00000011176	cstf2	96	56.333	Poecilia_latipinna
ENSPTIG00000009922	CSTF2	85	79.518	ENSPMEG00000017743	cstf2	96	56.000	Poecilia_mexicana
ENSPTIG00000009922	CSTF2	58	71.131	ENSPREG00000011481	cstf2	97	59.487	Poecilia_reticulata
ENSPTIG00000009922	CSTF2	100	96.817	ENSPPYG00000020541	CSTF2	100	96.817	Pongo_abelii
ENSPTIG00000009922	CSTF2	100	95.980	ENSPCOG00000027744	CSTF2	100	95.980	Propithecus_coquereli
ENSPTIG00000009922	CSTF2	97	82.765	ENSPVAG00000008342	CSTF2	100	82.765	Pteropus_vampyrus
ENSPTIG00000009922	CSTF2	99	59.899	ENSPNAG00000018887	cstf2	97	60.906	Pygocentrus_nattereri
ENSPTIG00000009922	CSTF2	100	91.034	ENSRNOG00000048025	Cstf2	100	91.034	Rattus_norvegicus
ENSPTIG00000009922	CSTF2	100	94.974	ENSRBIG00000030745	CSTF2	100	94.974	Rhinopithecus_bieti
ENSPTIG00000009922	CSTF2	100	96.650	ENSRROG00000045042	CSTF2	100	96.650	Rhinopithecus_roxellana
ENSPTIG00000009922	CSTF2	100	95.980	ENSSBOG00000021649	CSTF2	100	95.980	Saimiri_boliviensis_boliviensis
ENSPTIG00000009922	CSTF2	99	84.615	ENSSHAG00000003681	CSTF2	87	89.744	Sarcophilus_harrisii
ENSPTIG00000009922	CSTF2	99	63.561	ENSSFOG00015006348	cstf2	98	62.975	Scleropages_formosus
ENSPTIG00000009922	CSTF2	99	56.324	ENSSMAG00000013463	cstf2	96	59.177	Scophthalmus_maximus
ENSPTIG00000009922	CSTF2	100	63.839	ENSSPUG00000005288	-	98	79.661	Sphenodon_punctatus
ENSPTIG00000009922	CSTF2	100	96.650	ENSSSCG00000012486	CSTF2	100	96.650	Sus_scrofa
ENSPTIG00000009922	CSTF2	100	79.082	ENSTGUG00000002253	CSTF2	100	79.422	Taeniopygia_guttata
ENSPTIG00000009922	CSTF2	99	58.545	ENSTNIG00000016860	cstf2	99	58.853	Tetraodon_nigroviridis
ENSPTIG00000009922	CSTF2	55	97.561	ENSTBEG00000010029	-	69	97.561	Tupaia_belangeri
ENSPTIG00000009922	CSTF2	100	97.920	ENSTTRG00000013556	CSTF2	100	97.920	Tursiops_truncatus
ENSPTIG00000009922	CSTF2	100	97.841	ENSUAMG00000026605	CSTF2	100	97.841	Ursus_americanus
ENSPTIG00000009922	CSTF2	100	90.955	ENSUMAG00000012417	CSTF2	100	98.582	Ursus_maritimus
ENSPTIG00000009922	CSTF2	73	96.210	ENSVPAG00000006466	CSTF2	72	96.210	Vicugna_pacos
ENSPTIG00000009922	CSTF2	100	97.747	ENSVVUG00000004717	CSTF2	100	97.747	Vulpes_vulpes
ENSPTIG00000009922	CSTF2	81	90.625	ENSXETG00000009642	cstf2	87	90.625	Xenopus_tropicalis
ENSPTIG00000009922	CSTF2	86	75.904	ENSXCOG00000016436	cstf2	84	93.939	Xiphophorus_couchianus