EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000010051 (Gene tree)
Gene ID: 102955757
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 2736 bases
Position: chrKE721637.1:4584356-4587091
Accession: 102955757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000008780	RNA_ligase	PF09414.10	3.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000012676	LIG4-201	2736	XM_007075295	ENSPTIP00000008780	911 (aa)	XP_007075357	UPI00042BCC96

Gene Model

Click here to download ENSPTIG00000010051's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000010051's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000010051	LIG4	100	90.231	ENSG00000174405	LIG4	100	90.231	Homo_sapiens
ENSPTIG00000010051	LIG4	99	64.673	ENSAPOG00000000866	lig4	99	65.006	Acanthochromis_polyacanthus
ENSPTIG00000010051	LIG4	100	92.426	ENSAMEG00000019685	LIG4	99	92.426	Ailuropoda_melanoleuca
ENSPTIG00000010051	LIG4	99	64.784	ENSACIG00000018309	lig4	99	65.116	Amphilophus_citrinellus
ENSPTIG00000010051	LIG4	99	64.563	ENSAOCG00000011768	lig4	99	64.895	Amphiprion_ocellaris
ENSPTIG00000010051	LIG4	99	64.673	ENSAPEG00000017815	lig4	99	65.006	Amphiprion_percula
ENSPTIG00000010051	LIG4	99	64.934	ENSATEG00000005583	lig4	99	65.155	Anabas_testudineus
ENSPTIG00000010051	LIG4	97	74.318	ENSAPLG00000001673	LIG4	99	74.318	Anas_platyrhynchos
ENSPTIG00000010051	LIG4	99	74.197	ENSACAG00000014566	LIG4	99	74.197	Anolis_carolinensis
ENSPTIG00000010051	LIG4	100	89.243	ENSANAG00000012446	LIG4	100	89.243	Aotus_nancymaae
ENSPTIG00000010051	LIG4	99	64.835	ENSACLG00000027051	lig4	99	64.835	Astatotilapia_calliptera
ENSPTIG00000010051	LIG4	99	63.447	ENSAMXG00000008192	lig4	94	63.447	Astyanax_mexicanus
ENSPTIG00000010051	LIG4	100	89.243	ENSBTAG00000015868	LIG4	100	89.243	Bos_taurus
ENSPTIG00000010051	LIG4	100	88.364	ENSCJAG00000014689	LIG4	100	88.364	Callithrix_jacchus
ENSPTIG00000010051	LIG4	100	93.743	ENSCAFG00000006031	LIG4	100	93.743	Canis_familiaris
ENSPTIG00000010051	LIG4	100	93.743	ENSCAFG00020021230	LIG4	100	93.743	Canis_lupus_dingo
ENSPTIG00000010051	LIG4	100	88.804	ENSCHIG00000001019	LIG4	100	88.804	Capra_hircus
ENSPTIG00000010051	LIG4	99	88.483	ENSCAPG00000006284	LIG4	99	88.483	Cavia_aperea
ENSPTIG00000010051	LIG4	100	88.255	ENSCPOG00000014266	LIG4	100	88.255	Cavia_porcellus
ENSPTIG00000010051	LIG4	100	88.804	ENSCCAG00000019971	LIG4	100	88.804	Cebus_capucinus
ENSPTIG00000010051	LIG4	100	89.572	ENSCATG00000021075	LIG4	100	89.572	Cercocebus_atys
ENSPTIG00000010051	LIG4	100	88.364	ENSCLAG00000003376	LIG4	100	88.364	Chinchilla_lanigera
ENSPTIG00000010051	LIG4	100	90.011	ENSCSAG00000000211	LIG4	100	90.011	Chlorocebus_sabaeus
ENSPTIG00000010051	LIG4	99	77.704	ENSCPBG00000023291	LIG4	100	77.124	Chrysemys_picta_bellii
ENSPTIG00000010051	LIG4	69	45.383	ENSCING00000009536	-	97	45.383	Ciona_intestinalis
ENSPTIG00000010051	LIG4	83	45.276	ENSCSAVG00000010336	-	98	45.276	Ciona_savignyi
ENSPTIG00000010051	LIG4	100	89.462	ENSCANG00000005805	LIG4	100	89.462	Colobus_angolensis_palliatus
ENSPTIG00000010051	LIG4	100	85.965	ENSCGRG00001012072	Lig4	100	85.965	Cricetulus_griseus_chok1gshd
ENSPTIG00000010051	LIG4	100	85.965	ENSCGRG00000013417	Lig4	100	85.965	Cricetulus_griseus_crigri
ENSPTIG00000010051	LIG4	97	64.600	ENSCSEG00000013905	lig4	96	64.600	Cynoglossus_semilaevis
ENSPTIG00000010051	LIG4	99	65.116	ENSCVAG00000007896	lig4	99	65.116	Cyprinodon_variegatus
ENSPTIG00000010051	LIG4	99	63.008	ENSDARG00000060620	lig4	99	63.008	Danio_rerio
ENSPTIG00000010051	LIG4	100	87.939	ENSDNOG00000000513	LIG4	100	87.939	Dasypus_novemcinctus
ENSPTIG00000010051	LIG4	100	86.389	ENSDORG00000027303	Lig4	100	86.389	Dipodomys_ordii
ENSPTIG00000010051	LIG4	89	31.412	FBgn0030506	Lig4	91	31.412	Drosophila_melanogaster
ENSPTIG00000010051	LIG4	99	84.035	ENSETEG00000015563	LIG4	100	84.146	Echinops_telfairi
ENSPTIG00000010051	LIG4	99	44.105	ENSEBUG00000014243	lig4	99	44.105	Eptatretus_burgeri
ENSPTIG00000010051	LIG4	100	90.999	ENSEASG00005022073	LIG4	100	90.999	Equus_asinus_asinus
ENSPTIG00000010051	LIG4	100	90.560	ENSECAG00000003257	LIG4	100	90.560	Equus_caballus
ENSPTIG00000010051	LIG4	100	64.885	ENSELUG00000006787	lig4	100	64.995	Esox_lucius
ENSPTIG00000010051	LIG4	100	99.012	ENSFCAG00000031985	LIG4	100	99.012	Felis_catus
ENSPTIG00000010051	LIG4	89	74.969	ENSFALG00000004214	LIG4	98	74.969	Ficedula_albicollis
ENSPTIG00000010051	LIG4	100	88.035	ENSFDAG00000008973	LIG4	100	88.035	Fukomys_damarensis
ENSPTIG00000010051	LIG4	99	64.673	ENSFHEG00000007398	lig4	89	64.673	Fundulus_heteroclitus
ENSPTIG00000010051	LIG4	85	64.185	ENSGMOG00000012843	lig4	99	64.185	Gadus_morhua
ENSPTIG00000010051	LIG4	100	73.326	ENSGALG00000016854	LIG4	99	73.326	Gallus_gallus
ENSPTIG00000010051	LIG4	99	64.699	ENSGAFG00000019779	lig4	95	65.116	Gambusia_affinis
ENSPTIG00000010051	LIG4	99	62.569	ENSGACG00000014135	lig4	99	62.804	Gasterosteus_aculeatus
ENSPTIG00000010051	LIG4	100	90.121	ENSGGOG00000027771	LIG4	100	90.121	Gorilla_gorilla
ENSPTIG00000010051	LIG4	99	64.615	ENSHBUG00000006245	lig4	99	64.615	Haplochromis_burtoni
ENSPTIG00000010051	LIG4	100	87.925	ENSHGLG00000000718	LIG4	100	87.925	Heterocephalus_glaber_female
ENSPTIG00000010051	LIG4	100	87.925	ENSHGLG00100003265	LIG4	100	87.925	Heterocephalus_glaber_male
ENSPTIG00000010051	LIG4	99	64.066	ENSHCOG00000012010	lig4	99	64.066	Hippocampus_comes
ENSPTIG00000010051	LIG4	99	64.967	ENSIPUG00000013748	lig4	98	64.967	Ictalurus_punctatus
ENSPTIG00000010051	LIG4	100	87.925	ENSSTOG00000024303	LIG4	100	87.925	Ictidomys_tridecemlineatus
ENSPTIG00000010051	LIG4	100	86.169	ENSJJAG00000006750	Lig4	100	86.169	Jaculus_jaculus
ENSPTIG00000010051	LIG4	99	64.673	ENSKMAG00000001149	lig4	99	64.673	Kryptolebias_marmoratus
ENSPTIG00000010051	LIG4	91	65.024	ENSLBEG00000014578	lig4	100	65.385	Labrus_bergylta
ENSPTIG00000010051	LIG4	99	71.239	ENSLACG00000003282	LIG4	99	71.239	Latimeria_chalumnae
ENSPTIG00000010051	LIG4	100	68.894	ENSLOCG00000008901	lig4	98	68.894	Lepisosteus_oculatus
ENSPTIG00000010051	LIG4	100	86.528	ENSLAFG00000031152	LIG4	100	86.528	Loxodonta_africana
ENSPTIG00000010051	LIG4	100	89.791	ENSMFAG00000037235	LIG4	100	89.791	Macaca_fascicularis
ENSPTIG00000010051	LIG4	100	89.791	ENSMMUG00000008874	LIG4	100	89.791	Macaca_mulatta
ENSPTIG00000010051	LIG4	100	89.791	ENSMNEG00000023575	LIG4	100	89.791	Macaca_nemestrina
ENSPTIG00000010051	LIG4	100	89.682	ENSMLEG00000026720	LIG4	100	89.682	Mandrillus_leucophaeus
ENSPTIG00000010051	LIG4	99	64.895	ENSMAMG00000008472	lig4	98	65.227	Mastacembelus_armatus
ENSPTIG00000010051	LIG4	99	64.835	ENSMZEG00005001855	lig4	99	64.835	Maylandia_zebra
ENSPTIG00000010051	LIG4	100	74.127	ENSMGAG00000015532	LIG4	100	74.127	Meleagris_gallopavo
ENSPTIG00000010051	LIG4	100	84.303	ENSMOCG00000019000	Lig4	100	84.303	Microtus_ochrogaster
ENSPTIG00000010051	LIG4	99	64.009	ENSMMOG00000004390	lig4	99	64.009	Mola_mola
ENSPTIG00000010051	LIG4	100	82.656	ENSMODG00000025064	LIG4	100	83.114	Monodelphis_domestica
ENSPTIG00000010051	LIG4	99	64.784	ENSMALG00000008555	lig4	99	64.784	Monopterus_albus
ENSPTIG00000010051	LIG4	100	86.059	MGP_CAROLIEiJ_G0030809	Lig4	100	86.059	Mus_caroli
ENSPTIG00000010051	LIG4	100	85.510	ENSMUSG00000049717	Lig4	100	85.510	Mus_musculus
ENSPTIG00000010051	LIG4	100	86.059	MGP_PahariEiJ_G0021270	Lig4	100	86.059	Mus_pahari
ENSPTIG00000010051	LIG4	100	85.620	MGP_SPRETEiJ_G0031917	Lig4	100	85.620	Mus_spretus
ENSPTIG00000010051	LIG4	100	91.767	ENSMPUG00000018675	LIG4	100	91.767	Mustela_putorius_furo
ENSPTIG00000010051	LIG4	100	90.121	ENSMLUG00000001267	LIG4	100	90.121	Myotis_lucifugus
ENSPTIG00000010051	LIG4	100	86.059	ENSNGAG00000013258	Lig4	100	86.059	Nannospalax_galili
ENSPTIG00000010051	LIG4	99	64.396	ENSNBRG00000021252	lig4	99	64.396	Neolamprologus_brichardi
ENSPTIG00000010051	LIG4	100	90.011	ENSNLEG00000007888	LIG4	100	90.011	Nomascus_leucogenys
ENSPTIG00000010051	LIG4	100	86.608	ENSOPRG00000005765	LIG4	100	86.608	Ochotona_princeps
ENSPTIG00000010051	LIG4	100	86.608	ENSODEG00000019683	LIG4	100	86.608	Octodon_degus
ENSPTIG00000010051	LIG4	99	64.286	ENSONIG00000011969	lig4	98	64.615	Oreochromis_niloticus
ENSPTIG00000010051	LIG4	100	88.913	ENSOCUG00000015734	LIG4	100	88.913	Oryctolagus_cuniculus
ENSPTIG00000010051	LIG4	99	63.987	ENSORLG00000004041	lig4	99	63.987	Oryzias_latipes
ENSPTIG00000010051	LIG4	99	64.317	ENSORLG00020019607	lig4	99	64.317	Oryzias_latipes_hni
ENSPTIG00000010051	LIG4	99	64.097	ENSORLG00015017754	lig4	99	64.097	Oryzias_latipes_hsok
ENSPTIG00000010051	LIG4	74	68.787	ENSOMEG00000003459	lig4	98	68.787	Oryzias_melastigma
ENSPTIG00000010051	LIG4	100	89.035	ENSOGAG00000032120	LIG4	99	89.035	Otolemur_garnettii
ENSPTIG00000010051	LIG4	82	90.336	ENSOARG00000005590	LIG4	98	90.336	Ovis_aries
ENSPTIG00000010051	LIG4	100	90.011	ENSPPAG00000032998	LIG4	100	90.011	Pan_paniscus
ENSPTIG00000010051	LIG4	100	99.671	ENSPPRG00000017804	LIG4	100	99.671	Panthera_pardus
ENSPTIG00000010051	LIG4	100	90.121	ENSPTRG00000006025	LIG4	100	90.121	Pan_troglodytes
ENSPTIG00000010051	LIG4	100	89.682	ENSPANG00000007562	LIG4	100	89.682	Papio_anubis
ENSPTIG00000010051	LIG4	99	65.971	ENSPKIG00000011645	lig4	98	65.971	Paramormyrops_kingsleyae
ENSPTIG00000010051	LIG4	100	76.747	ENSPSIG00000001504	LIG4	100	76.747	Pelodiscus_sinensis
ENSPTIG00000010051	LIG4	99	62.111	ENSPMGG00000013486	lig4	98	62.058	Periophthalmus_magnuspinnatus
ENSPTIG00000010051	LIG4	100	85.636	ENSPEMG00000000076	Lig4	100	85.636	Peromyscus_maniculatus_bairdii
ENSPTIG00000010051	LIG4	100	83.004	ENSPCIG00000021882	LIG4	100	83.004	Phascolarctos_cinereus
ENSPTIG00000010051	LIG4	99	65.295	ENSPFOG00000000797	lig4	98	65.227	Poecilia_formosa
ENSPTIG00000010051	LIG4	99	65.184	ENSPLAG00000001196	lig4	98	65.116	Poecilia_latipinna
ENSPTIG00000010051	LIG4	99	65.295	ENSPMEG00000021353	lig4	98	65.338	Poecilia_mexicana
ENSPTIG00000010051	LIG4	99	65.072	ENSPREG00000007323	lig4	98	65.006	Poecilia_reticulata
ENSPTIG00000010051	LIG4	100	90.011	ENSPPYG00000005540	LIG4	100	90.011	Pongo_abelii
ENSPTIG00000010051	LIG4	100	89.901	ENSPVAG00000016403	LIG4	100	89.901	Pteropus_vampyrus
ENSPTIG00000010051	LIG4	99	64.725	ENSPNYG00000009660	lig4	99	64.725	Pundamilia_nyererei
ENSPTIG00000010051	LIG4	100	63.308	ENSPNAG00000028069	LIG4	100	63.308	Pygocentrus_nattereri
ENSPTIG00000010051	LIG4	100	63.308	ENSPNAG00000028056	lig4	100	63.308	Pygocentrus_nattereri
ENSPTIG00000010051	LIG4	100	84.523	ENSRNOG00000014605	Lig4	100	84.523	Rattus_norvegicus
ENSPTIG00000010051	LIG4	100	88.145	ENSRBIG00000039962	LIG4	100	88.145	Rhinopithecus_bieti
ENSPTIG00000010051	LIG4	100	89.023	ENSRROG00000006040	LIG4	100	89.023	Rhinopithecus_roxellana
ENSPTIG00000010051	LIG4	100	88.474	ENSSBOG00000019029	LIG4	100	88.474	Saimiri_boliviensis_boliviensis
ENSPTIG00000010051	LIG4	100	79.254	ENSSHAG00000009525	LIG4	100	79.825	Sarcophilus_harrisii
ENSPTIG00000010051	LIG4	99	65.017	ENSSFOG00015012835	lig4	99	65.017	Scleropages_formosus
ENSPTIG00000010051	LIG4	99	63.344	ENSSMAG00000011267	lig4	99	63.344	Scophthalmus_maximus
ENSPTIG00000010051	LIG4	99	65.299	ENSSDUG00000010343	lig4	98	65.299	Seriola_dumerili
ENSPTIG00000010051	LIG4	99	64.120	ENSSLDG00000003239	lig4	99	64.120	Seriola_lalandi_dorsalis
ENSPTIG00000010051	LIG4	100	83.260	ENSSARG00000006573	LIG4	100	83.260	Sorex_araneus
ENSPTIG00000010051	LIG4	93	76.066	ENSSPUG00000002444	LIG4	100	76.066	Sphenodon_punctatus
ENSPTIG00000010051	LIG4	99	64.784	ENSSPAG00000001609	lig4	99	64.784	Stegastes_partitus
ENSPTIG00000010051	LIG4	100	88.255	ENSSSCG00000009540	LIG4	100	88.255	Sus_scrofa
ENSPTIG00000010051	LIG4	99	73.673	ENSTGUG00000010795	LIG4	99	73.673	Taeniopygia_guttata
ENSPTIG00000010051	LIG4	99	64.452	ENSTRUG00000009984	lig4	99	64.452	Takifugu_rubripes
ENSPTIG00000010051	LIG4	99	64.895	ENSTNIG00000010348	lig4	99	65.116	Tetraodon_nigroviridis
ENSPTIG00000010051	LIG4	100	89.133	ENSTBEG00000017741	LIG4	100	89.133	Tupaia_belangeri
ENSPTIG00000010051	LIG4	100	89.791	ENSTTRG00000012660	LIG4	100	89.791	Tursiops_truncatus
ENSPTIG00000010051	LIG4	100	92.206	ENSUAMG00000003773	LIG4	100	92.206	Ursus_americanus
ENSPTIG00000010051	LIG4	99	71.239	ENSXETG00000002654	lig4	99	71.239	Xenopus_tropicalis
ENSPTIG00000010051	LIG4	99	64.850	ENSXCOG00000017401	lig4	98	64.784	Xiphophorus_couchianus
ENSPTIG00000010051	LIG4	99	65.111	ENSXMAG00000015142	lig4	98	65.044	Xiphophorus_maculatus