EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000010283 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3-like
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 29094 bases
Position: chrKE721724.1:2715245-2744338
Accession: 102971284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000009121	APOBEC_N	PF08210.11	2.3e-40	1	1
ENSPTIP00000009121	APOBEC_C	PF05240.14	5.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000013029	-	1562	XM_007079404	ENSPTIP00000009121	194 (aa)	XP_007079466	UPI0001608443

Gene Model

Click here to download ENSPTIG00000010283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000010283's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000010283	-	87	36.571	ENSPTIG00000020074	AICDA	88	36.571
ENSPTIG00000010283	-	68	34.848	ENSPTIG00000020280	APOBEC1	56	34.848

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000010283	-	93	50.543	ENSG00000100298	APOBEC3H	99	51.381	Homo_sapiens
ENSPTIG00000010283	-	99	63.317	ENSAMEG00000010818	-	81	63.317	Ailuropoda_melanoleuca
ENSPTIG00000010283	-	99	51.980	ENSANAG00000025410	APOBEC3H	90	51.980	Aotus_nancymaae
ENSPTIG00000010283	-	95	63.128	ENSBTAG00000007755	APOBEC3H	94	63.128	Bos_taurus
ENSPTIG00000010283	-	91	51.934	ENSCJAG00000012524	APOBEC3H	91	51.064	Callithrix_jacchus
ENSPTIG00000010283	-	99	69.430	ENSCAFG00000001361	APOBEC3Z3	100	69.430	Canis_familiaris
ENSPTIG00000010283	-	95	65.761	ENSCAFG00020002584	-	92	67.416	Canis_lupus_dingo
ENSPTIG00000010283	-	95	63.128	ENSCHIG00000026580	-	96	63.128	Capra_hircus
ENSPTIG00000010283	-	90	54.023	ENSTSYG00000032894	-	99	54.023	Carlito_syrichta
ENSPTIG00000010283	-	99	51.562	ENSCPOG00000009257	-	89	51.562	Cavia_porcellus
ENSPTIG00000010283	-	99	50.500	ENSCCAG00000008525	APOBEC3H	94	51.000	Cebus_capucinus
ENSPTIG00000010283	-	93	52.717	ENSCATG00000030302	APOBEC3H	99	53.039	Cercocebus_atys
ENSPTIG00000010283	-	98	53.093	ENSCLAG00000016615	-	96	53.093	Chinchilla_lanigera
ENSPTIG00000010283	-	99	52.261	ENSCSAG00000006371	APOBEC3H	94	52.261	Chlorocebus_sabaeus
ENSPTIG00000010283	-	98	55.385	ENSCGRG00001022976	Apobec3	86	55.385	Cricetulus_griseus_chok1gshd
ENSPTIG00000010283	-	98	55.385	ENSCGRG00000005621	Apobec3	88	55.385	Cricetulus_griseus_crigri
ENSPTIG00000010283	-	90	54.494	ENSDORG00000027271	-	87	54.494	Dipodomys_ordii
ENSPTIG00000010283	-	98	60.104	ENSECAG00000007726	APOBEC3H	83	60.104	Equus_caballus
ENSPTIG00000010283	-	100	95.361	ENSFCAG00000005251	APOBEC3Z3	100	95.361	Felis_catus
ENSPTIG00000010283	-	94	53.226	ENSSTOG00000007125	-	88	53.226	Ictidomys_tridecemlineatus
ENSPTIG00000010283	-	83	52.593	ENSJJAG00000016840	-	74	52.593	Jaculus_jaculus
ENSPTIG00000010283	-	92	52.571	ENSLAFG00000027404	-	94	52.571	Loxodonta_africana
ENSPTIG00000010283	-	99	52.020	ENSMFAG00000031827	APOBEC3H	94	52.020	Macaca_fascicularis
ENSPTIG00000010283	-	99	52.525	ENSMMUG00000001016	APOBEC3H	94	52.525	Macaca_mulatta
ENSPTIG00000010283	-	99	52.020	ENSMNEG00000039259	APOBEC3H	94	52.020	Macaca_nemestrina
ENSPTIG00000010283	-	99	51.759	ENSMLEG00000033417	APOBEC3H	92	53.804	Mandrillus_leucophaeus
ENSPTIG00000010283	-	98	54.872	ENSMAUG00000011683	Apobec3	91	54.872	Mesocricetus_auratus
ENSPTIG00000010283	-	98	53.646	ENSMOCG00000021576	Apobec3	81	55.172	Microtus_ochrogaster
ENSPTIG00000010283	-	99	48.980	MGP_CAROLIEiJ_G0020029	Apobec3	98	48.980	Mus_caroli
ENSPTIG00000010283	-	99	51.020	ENSMUSG00000009585	Apobec3	100	52.000	Mus_musculus
ENSPTIG00000010283	-	99	51.000	MGP_PahariEiJ_G0020031	-	87	51.000	Mus_pahari
ENSPTIG00000010283	-	98	50.259	MGP_SPRETEiJ_G0020927	Apobec3	98	45.783	Mus_spretus
ENSPTIG00000010283	-	99	65.979	ENSMPUG00000013239	-	92	65.979	Mustela_putorius_furo
ENSPTIG00000010283	-	99	50.000	ENSNGAG00000018998	Apobec3	98	50.521	Nannospalax_galili
ENSPTIG00000010283	-	99	50.754	ENSNLEG00000015218	-	94	50.754	Nomascus_leucogenys
ENSPTIG00000010283	-	93	41.530	ENSOCUG00000023913	-	90	41.530	Oryctolagus_cuniculus
ENSPTIG00000010283	-	95	63.687	ENSOARG00000016290	APOBEC3F	97	63.687	Ovis_aries
ENSPTIG00000010283	-	93	50.543	ENSPPAG00000036522	APOBEC3H	98	51.381	Pan_paniscus
ENSPTIG00000010283	-	92	35.326	ENSPPRG00000003675	-	94	35.326	Panthera_pardus
ENSPTIG00000010283	-	100	99.485	ENSPPRG00000003941	-	100	99.485	Panthera_pardus
ENSPTIG00000010283	-	93	50.543	ENSPTRG00000014390	APOBEC3H	98	51.381	Pan_troglodytes
ENSPTIG00000010283	-	99	51.515	ENSPANG00000010774	APOBEC3H	94	51.515	Papio_anubis
ENSPTIG00000010283	-	99	51.777	ENSPEMG00000000456	Apobec3	82	51.777	Peromyscus_maniculatus_bairdii
ENSPTIG00000010283	-	99	49.246	ENSPPYG00000011834	-	94	49.246	Pongo_abelii
ENSPTIG00000010283	-	89	47.674	ENSPCAG00000015655	-	96	47.674	Procavia_capensis
ENSPTIG00000010283	-	64	32.258	ENSPVAG00000024267	-	94	32.258	Pteropus_vampyrus
ENSPTIG00000010283	-	64	35.484	ENSPVAG00000024161	-	94	35.484	Pteropus_vampyrus
ENSPTIG00000010283	-	91	61.017	ENSPVAG00000009462	-	99	61.017	Pteropus_vampyrus
ENSPTIG00000010283	-	96	54.144	ENSRNOG00000016852	Apobec3	91	54.144	Rattus_norvegicus
ENSPTIG00000010283	-	99	50.251	ENSRBIG00000029088	APOBEC3H	94	50.251	Rhinopithecus_bieti
ENSPTIG00000010283	-	99	49.749	ENSRROG00000024699	APOBEC3H	94	49.749	Rhinopithecus_roxellana
ENSPTIG00000010283	-	91	52.198	ENSSBOG00000030005	APOBEC3H	100	52.482	Saimiri_boliviensis_boliviensis
ENSPTIG00000010283	-	99	58.974	ENSSSCG00000000091	APOBEC3B	80	58.974	Sus_scrofa
ENSPTIG00000010283	-	88	53.801	ENSTBEG00000001532	-	99	53.801	Tupaia_belangeri
ENSPTIG00000010283	-	92	60.894	ENSTTRG00000001266	-	100	60.894	Tursiops_truncatus
ENSPTIG00000010283	-	94	62.105	ENSUAMG00000004427	-	86	62.105	Ursus_americanus
ENSPTIG00000010283	-	99	66.495	ENSUMAG00000014435	-	99	66.495	Ursus_maritimus
ENSPTIG00000010283	-	65	59.055	ENSVPAG00000011108	-	99	59.055	Vicugna_pacos
ENSPTIG00000010283	-	96	71.739	ENSVVUG00000014624	-	60	71.739	Vulpes_vulpes