EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000010393 (Gene tree)
Gene ID: 102969666
Gene Symbol: NCL
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 8892 bases
Position: chrKE721771.1:3882107-3890998
Accession: 102969666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000009260	RRM_1	PF00076.22	1.5e-58	1	4
ENSPTIP00000009260	RRM_1	PF00076.22	1.5e-58	2	4
ENSPTIP00000009260	RRM_1	PF00076.22	1.5e-58	3	4
ENSPTIP00000009260	RRM_1	PF00076.22	1.5e-58	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000013175	NCL-201	2148	XM_007083014	ENSPTIP00000009260	715 (aa)	XP_007083076	-

Gene Model

Click here to download ENSPTIG00000010393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000010393's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000010393	NCL	91	89.060	ENSG00000115053	NCL	100	90.878	Homo_sapiens
ENSPTIG00000010393	NCL	61	99.317	ENSAMEG00000016289	NCL	91	93.558	Ailuropoda_melanoleuca
ENSPTIG00000010393	NCL	99	70.638	ENSANAG00000024378	-	85	84.091	Aotus_nancymaae
ENSPTIG00000010393	NCL	91	89.385	ENSANAG00000035814	-	99	90.014	Aotus_nancymaae
ENSPTIG00000010393	NCL	53	90.574	ENSBTAG00000050728	-	80	90.574	Bos_taurus
ENSPTIG00000010393	NCL	94	87.135	ENSBTAG00000016174	NCL	91	89.210	Bos_taurus
ENSPTIG00000010393	NCL	76	92.977	ENSBTAG00000026909	-	94	92.977	Bos_taurus
ENSPTIG00000010393	NCL	53	96.834	ENSCJAG00000013538	NCL	91	85.627	Callithrix_jacchus
ENSPTIG00000010393	NCL	91	94.607	ENSCAFG00000011037	NCL	91	94.607	Canis_familiaris
ENSPTIG00000010393	NCL	84	94.352	ENSCAFG00020023145	NCL	87	94.595	Canis_lupus_dingo
ENSPTIG00000010393	NCL	85	88.468	ENSCHIG00000010894	-	98	89.954	Capra_hircus
ENSPTIG00000010393	NCL	91	63.790	ENSCHIG00000012143	-	91	73.740	Capra_hircus
ENSPTIG00000010393	NCL	72	93.931	ENSCHIG00000021052	-	97	96.503	Capra_hircus
ENSPTIG00000010393	NCL	91	80.551	ENSCHIG00000026149	-	92	81.317	Capra_hircus
ENSPTIG00000010393	NCL	91	87.596	ENSTSYG00000004355	-	91	87.443	Carlito_syrichta
ENSPTIG00000010393	NCL	94	85.915	ENSTSYG00000029779	-	96	85.095	Carlito_syrichta
ENSPTIG00000010393	NCL	89	74.411	ENSTSYG00000036886	-	91	75.347	Carlito_syrichta
ENSPTIG00000010393	NCL	91	79.817	ENSCAPG00000009405	NCL	91	80.275	Cavia_aperea
ENSPTIG00000010393	NCL	91	82.416	ENSCPOG00000001034	NCL	91	83.180	Cavia_porcellus
ENSPTIG00000010393	NCL	53	96.834	ENSCCAG00000021040	-	99	88.152	Cebus_capucinus
ENSPTIG00000010393	NCL	56	88.945	ENSCCAG00000000551	-	76	89.055	Cebus_capucinus
ENSPTIG00000010393	NCL	91	89.401	ENSCATG00000037033	NCL	99	90.717	Cercocebus_atys
ENSPTIG00000010393	NCL	99	83.473	ENSCLAG00000013080	NCL	91	81.804	Chinchilla_lanigera
ENSPTIG00000010393	NCL	62	97.500	ENSCSAG00000006660	NCL	95	97.500	Chlorocebus_sabaeus
ENSPTIG00000010393	NCL	62	76.136	ENSCHOG00000012860	NCL	89	75.395	Choloepus_hoffmanni
ENSPTIG00000010393	NCL	54	92.526	ENSCANG00000036756	NCL	89	92.526	Colobus_angolensis_palliatus
ENSPTIG00000010393	NCL	91	81.470	ENSCGRG00001024315	-	90	82.083	Cricetulus_griseus_chok1gshd
ENSPTIG00000010393	NCL	91	67.424	ENSCGRG00001022350	-	94	68.445	Cricetulus_griseus_chok1gshd
ENSPTIG00000010393	NCL	85	81.199	ENSCGRG00000017894	-	88	82.736	Cricetulus_griseus_crigri
ENSPTIG00000010393	NCL	91	67.927	ENSCGRG00000000507	-	92	66.820	Cricetulus_griseus_crigri
ENSPTIG00000010393	NCL	99	76.124	ENSDNOG00000046347	-	99	75.702	Dasypus_novemcinctus
ENSPTIG00000010393	NCL	99	85.534	ENSDNOG00000010783	-	91	86.963	Dasypus_novemcinctus
ENSPTIG00000010393	NCL	51	73.224	ENSDORG00000023596	-	92	68.056	Dipodomys_ordii
ENSPTIG00000010393	NCL	53	83.377	ENSDORG00000012513	-	90	76.271	Dipodomys_ordii
ENSPTIG00000010393	NCL	85	81.803	ENSETEG00000018937	-	85	82.131	Echinops_telfairi
ENSPTIG00000010393	NCL	53	90.186	ENSETEG00000014756	-	86	90.237	Echinops_telfairi
ENSPTIG00000010393	NCL	62	61.036	ENSETEG00000008553	-	88	60.586	Echinops_telfairi
ENSPTIG00000010393	NCL	71	66.396	ENSETEG00000008139	-	88	66.216	Echinops_telfairi
ENSPTIG00000010393	NCL	89	90.839	ENSEASG00005008488	NCL	91	91.770	Equus_asinus_asinus
ENSPTIG00000010393	NCL	91	90.367	ENSECAG00000021868	NCL	91	91.590	Equus_caballus
ENSPTIG00000010393	NCL	85	81.669	ENSEEUG00000005913	NCL	85	80.687	Erinaceus_europaeus
ENSPTIG00000010393	NCL	99	99.015	ENSFCAG00000027622	NCL	99	99.015	Felis_catus
ENSPTIG00000010393	NCL	91	85.780	ENSFDAG00000014291	NCL	100	85.574	Fukomys_damarensis
ENSPTIG00000010393	NCL	91	89.094	ENSGGOG00000004300	NCL	99	90.295	Gorilla_gorilla
ENSPTIG00000010393	NCL	56	83.182	ENSHGLG00000005133	-	93	74.126	Heterocephalus_glaber_female
ENSPTIG00000010393	NCL	90	76.389	ENSHGLG00000011069	-	62	80.361	Heterocephalus_glaber_female
ENSPTIG00000010393	NCL	53	94.195	ENSHGLG00000002031	-	91	83.639	Heterocephalus_glaber_female
ENSPTIG00000010393	NCL	57	79.462	ENSHGLG00100000745	-	59	84.881	Heterocephalus_glaber_male
ENSPTIG00000010393	NCL	53	93.931	ENSHGLG00100014537	-	99	84.454	Heterocephalus_glaber_male
ENSPTIG00000010393	NCL	55	82.097	ENSJJAG00000016165	Ncl	93	78.064	Jaculus_jaculus
ENSPTIG00000010393	NCL	90	74.422	ENSLAFG00000013061	NCL	90	73.425	Loxodonta_africana
ENSPTIG00000010393	NCL	91	89.555	ENSMFAG00000040385	NCL	91	89.862	Macaca_fascicularis
ENSPTIG00000010393	NCL	91	89.555	ENSMMUG00000018094	NCL	91	89.862	Macaca_mulatta
ENSPTIG00000010393	NCL	62	93.002	ENSMNEG00000023839	NCL	83	94.615	Macaca_nemestrina
ENSPTIG00000010393	NCL	91	89.555	ENSMLEG00000028935	NCL	91	90.015	Mandrillus_leucophaeus
ENSPTIG00000010393	NCL	91	71.231	ENSMICG00000029975	-	85	81.481	Microcebus_murinus
ENSPTIG00000010393	NCL	99	88.045	ENSMICG00000002538	-	91	87.865	Microcebus_murinus
ENSPTIG00000010393	NCL	91	77.642	MGP_CAROLIEiJ_G0014362	Ncl	91	78.867	Mus_caroli
ENSPTIG00000010393	NCL	91	77.029	ENSMUSG00000026234	Ncl	91	78.254	Mus_musculus
ENSPTIG00000010393	NCL	91	77.099	MGP_PahariEiJ_G0027599	Ncl	91	77.252	Mus_pahari
ENSPTIG00000010393	NCL	91	76.911	MGP_SPRETEiJ_G0015164	Ncl	91	78.287	Mus_spretus
ENSPTIG00000010393	NCL	91	86.870	ENSMLUG00000014547	NCL	91	88.397	Myotis_lucifugus
ENSPTIG00000010393	NCL	71	72.559	ENSNGAG00000006188	-	54	72.559	Nannospalax_galili
ENSPTIG00000010393	NCL	91	79.819	ENSNGAG00000002454	-	91	80.455	Nannospalax_galili
ENSPTIG00000010393	NCL	85	76.182	ENSNLEG00000014107	-	95	78.324	Nomascus_leucogenys
ENSPTIG00000010393	NCL	91	85.169	ENSODEG00000002441	-	89	85.169	Octodon_degus
ENSPTIG00000010393	NCL	99	64.831	ENSODEG00000007803	-	90	64.298	Octodon_degus
ENSPTIG00000010393	NCL	90	80.645	ENSODEG00000003281	-	90	80.521	Octodon_degus
ENSPTIG00000010393	NCL	91	78.769	ENSOCUG00000004312	NCL	99	79.718	Oryctolagus_cuniculus
ENSPTIG00000010393	NCL	77	87.863	ENSOGAG00000027852	NCL	82	87.863	Otolemur_garnettii
ENSPTIG00000010393	NCL	70	90.703	ENSOARG00000013710	-	94	79.412	Ovis_aries
ENSPTIG00000010393	NCL	54	80.570	ENSOARG00000004072	-	92	71.669	Ovis_aries
ENSPTIG00000010393	NCL	91	83.485	ENSOARG00000020709	-	92	83.030	Ovis_aries
ENSPTIG00000010393	NCL	87	85.567	ENSOARG00000013270	-	99	90.110	Ovis_aries
ENSPTIG00000010393	NCL	91	88.444	ENSPPAG00000011619	NCL	100	93.160	Pan_paniscus
ENSPTIG00000010393	NCL	99	99.859	ENSPPRG00000012603	NCL	99	99.859	Panthera_pardus
ENSPTIG00000010393	NCL	91	89.247	ENSPTRG00000013025	NCL	100	93.485	Pan_troglodytes
ENSPTIG00000010393	NCL	91	89.555	ENSPANG00000010292	NCL	91	89.862	Papio_anubis
ENSPTIG00000010393	NCL	99	84.107	ENSPPYG00000013265	NCL	91	83.206	Pongo_abelii
ENSPTIG00000010393	NCL	91	88.226	ENSPCOG00000003051	-	90	88.226	Propithecus_coquereli
ENSPTIG00000010393	NCL	90	82.353	ENSPCOG00000004160	-	93	82.515	Propithecus_coquereli
ENSPTIG00000010393	NCL	91	88.974	ENSPVAG00000000297	NCL	99	89.902	Pteropus_vampyrus
ENSPTIG00000010393	NCL	91	78.963	ENSRNOG00000018273	Ncl	91	79.726	Rattus_norvegicus
ENSPTIG00000010393	NCL	65	97.578	ENSRBIG00000035396	-	87	95.638	Rhinopithecus_bieti
ENSPTIG00000010393	NCL	91	85.208	ENSRBIG00000037525	-	90	85.054	Rhinopithecus_bieti
ENSPTIG00000010393	NCL	88	98.932	ENSRROG00000028756	-	99	98.932	Rhinopithecus_roxellana
ENSPTIG00000010393	NCL	99	85.615	ENSRROG00000036103	-	98	87.418	Rhinopithecus_roxellana
ENSPTIG00000010393	NCL	70	86.535	ENSSBOG00000027549	-	93	89.294	Saimiri_boliviensis_boliviensis
ENSPTIG00000010393	NCL	53	97.098	ENSSBOG00000029193	-	91	88.804	Saimiri_boliviensis_boliviensis
ENSPTIG00000010393	NCL	55	74.429	ENSSBOG00000023094	-	76	74.661	Saimiri_boliviensis_boliviensis
ENSPTIG00000010393	NCL	91	89.666	ENSSSCG00000016275	NCL	91	89.666	Sus_scrofa
ENSPTIG00000010393	NCL	55	84.433	ENSTBEG00000001546	-	85	81.639	Tupaia_belangeri
ENSPTIG00000010393	NCL	65	82.153	ENSTBEG00000002469	-	66	82.000	Tupaia_belangeri
ENSPTIG00000010393	NCL	91	89.522	ENSTTRG00000009094	NCL	91	88.752	Tursiops_truncatus
ENSPTIG00000010393	NCL	75	94.541	ENSUAMG00000005639	NCL	100	96.223	Ursus_americanus
ENSPTIG00000010393	NCL	91	93.991	ENSUMAG00000015789	NCL	91	93.837	Ursus_maritimus
ENSPTIG00000010393	NCL	68	90.441	ENSVPAG00000001796	NCL	68	90.441	Vicugna_pacos
ENSPTIG00000010393	NCL	99	90.550	ENSVVUG00000025564	NCL	99	90.550	Vulpes_vulpes