EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000010462 (Gene tree)
Gene ID: 102962629
Gene Symbol: VARS
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 13435 bases
Position: chrKE722358.1:200513-213947
Accession: 102962629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000009371	tRNA-synt_1g	PF09334.11	5.2e-11	1	1
ENSPTIP00000009354	tRNA-synt_1g	PF09334.11	5.8e-11	1	1
ENSPTIP00000009371	Anticodon_1	PF08264.13	1.9e-33	1	1
ENSPTIP00000009354	Anticodon_1	PF08264.13	2e-33	1	1
ENSPTIP00000009371	tRNA-synt_1	PF00133.22	7.2e-202	1	1
ENSPTIP00000009354	tRNA-synt_1	PF00133.22	4.5e-196	1	2
ENSPTIP00000009354	tRNA-synt_1	PF00133.22	4.5e-196	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000013271	VARS-201	3634	-	ENSPTIP00000009354	1178 (aa)	-	-
ENSPTIT00000013288	VARS-202	3547	XM_007098819	ENSPTIP00000009371	1149 (aa)	XP_007098881	-

Gene Model

Click here to download ENSPTIG00000010462's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000010462's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000010462	VARS	82	52.280	ENSPTIG00000017799	VARS2	87	54.139

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000010462	VARS	95	95.055	ENSG00000204394	VARS	99	84.663	Homo_sapiens
ENSPTIG00000010462	VARS	93	69.023	ENSAPOG00000020691	vars	87	69.210	Acanthochromis_polyacanthus
ENSPTIG00000010462	VARS	93	69.023	ENSAPOG00000020921	vars	87	69.210	Acanthochromis_polyacanthus
ENSPTIG00000010462	VARS	95	97.250	ENSAMEG00000006417	VARS	86	97.250	Ailuropoda_melanoleuca
ENSPTIG00000010462	VARS	95	69.189	ENSACIG00000013752	vars	85	69.703	Amphilophus_citrinellus
ENSPTIG00000010462	VARS	93	69.259	ENSAOCG00000002447	vars	85	68.837	Amphiprion_ocellaris
ENSPTIG00000010462	VARS	93	68.915	ENSAPEG00000010638	vars	84	69.210	Amphiprion_percula
ENSPTIG00000010462	VARS	97	65.408	ENSATEG00000020219	vars	85	68.721	Anabas_testudineus
ENSPTIG00000010462	VARS	91	73.127	ENSACAG00000029133	-	93	73.070	Anolis_carolinensis
ENSPTIG00000010462	VARS	95	94.963	ENSANAG00000015453	VARS	85	94.981	Aotus_nancymaae
ENSPTIG00000010462	VARS	94	68.592	ENSACLG00000025699	vars	82	68.928	Astatotilapia_calliptera
ENSPTIG00000010462	VARS	95	68.824	ENSAMXG00000017716	vars	85	69.683	Astyanax_mexicanus
ENSPTIG00000010462	VARS	95	96.245	ENSBTAG00000005631	VARS	85	96.283	Bos_taurus
ENSPTIG00000010462	VARS	95	94.963	ENSCJAG00000002604	VARS	85	94.981	Callithrix_jacchus
ENSPTIG00000010462	VARS	95	96.062	ENSCAFG00000000636	VARS	85	96.097	Canis_familiaris
ENSPTIG00000010462	VARS	95	96.154	ENSCAFG00020020790	VARS	87	96.190	Canis_lupus_dingo
ENSPTIG00000010462	VARS	95	96.429	ENSCHIG00000011008	VARS	86	96.429	Capra_hircus
ENSPTIG00000010462	VARS	95	95.055	ENSTSYG00000001567	VARS	85	95.074	Carlito_syrichta
ENSPTIG00000010462	VARS	91	92.146	ENSCAPG00000013736	VARS	89	92.189	Cavia_aperea
ENSPTIG00000010462	VARS	95	92.125	ENSCPOG00000000870	VARS	85	92.100	Cavia_porcellus
ENSPTIG00000010462	VARS	95	94.963	ENSCCAG00000035656	VARS	85	94.981	Cebus_capucinus
ENSPTIG00000010462	VARS	95	94.872	ENSCATG00000022394	VARS	85	94.888	Cercocebus_atys
ENSPTIG00000010462	VARS	91	89.739	ENSCLAG00000009470	VARS	86	89.765	Chinchilla_lanigera
ENSPTIG00000010462	VARS	95	94.872	ENSCSAG00000008784	VARS	85	94.888	Chlorocebus_sabaeus
ENSPTIG00000010462	VARS	77	76.564	ENSCPBG00000007943	VARS	86	76.686	Chrysemys_picta_bellii
ENSPTIG00000010462	VARS	95	94.780	ENSCANG00000033570	VARS	85	94.796	Colobus_angolensis_palliatus
ENSPTIG00000010462	VARS	95	93.132	ENSCGRG00001005686	Vars	85	93.123	Cricetulus_griseus_chok1gshd
ENSPTIG00000010462	VARS	93	87.659	ENSCGRG00000013352	Vars	71	87.671	Cricetulus_griseus_crigri
ENSPTIG00000010462	VARS	94	68.392	ENSCSEG00000019652	vars	85	68.489	Cynoglossus_semilaevis
ENSPTIG00000010462	VARS	93	69.371	ENSCVAG00000022398	vars	86	69.189	Cyprinodon_variegatus
ENSPTIG00000010462	VARS	94	68.202	ENSDARG00000044575	vars	86	68.624	Danio_rerio
ENSPTIG00000010462	VARS	85	92.791	ENSDORG00000016433	Vars	86	92.842	Dipodomys_ordii
ENSPTIG00000010462	VARS	68	86.667	ENSETEG00000003824	VARS	69	87.500	Echinops_telfairi
ENSPTIG00000010462	VARS	55	64.409	ENSEBUG00000004637	vars	86	65.024	Eptatretus_burgeri
ENSPTIG00000010462	VARS	95	96.978	ENSEASG00005015673	VARS	86	96.978	Equus_asinus_asinus
ENSPTIG00000010462	VARS	95	96.798	ENSECAG00000014620	VARS	86	96.798	Equus_caballus
ENSPTIG00000010462	VARS	71	93.269	ENSEEUG00000004116	VARS	65	93.269	Erinaceus_europaeus
ENSPTIG00000010462	VARS	94	67.899	ENSELUG00000006550	vars	83	68.402	Esox_lucius
ENSPTIG00000010462	VARS	95	99.634	ENSFCAG00000004510	VARS	86	99.634	Felis_catus
ENSPTIG00000010462	VARS	84	91.856	ENSFDAG00000011401	VARS	94	91.856	Fukomys_damarensis
ENSPTIG00000010462	VARS	94	69.078	ENSFHEG00000010672	vars	85	69.442	Fundulus_heteroclitus
ENSPTIG00000010462	VARS	93	67.847	ENSGMOG00000014908	vars	89	67.847	Gadus_morhua
ENSPTIG00000010462	VARS	93	69.589	ENSGAFG00000021630	vars	86	69.406	Gambusia_affinis
ENSPTIG00000010462	VARS	93	68.120	ENSGACG00000009601	vars	90	67.909	Gasterosteus_aculeatus
ENSPTIG00000010462	VARS	95	94.963	ENSGGOG00000011364	VARS	85	94.981	Gorilla_gorilla
ENSPTIG00000010462	VARS	94	68.592	ENSHBUG00000017151	vars	82	68.928	Haplochromis_burtoni
ENSPTIG00000010462	VARS	95	90.568	ENSHGLG00000011646	VARS	85	90.335	Heterocephalus_glaber_female
ENSPTIG00000010462	VARS	95	83.094	ENSHGLG00100018062	VARS	91	83.015	Heterocephalus_glaber_male
ENSPTIG00000010462	VARS	94	67.777	ENSHCOG00000012198	vars	85	68.440	Hippocampus_comes
ENSPTIG00000010462	VARS	95	69.210	ENSIPUG00000005218	vars	85	70.129	Ictalurus_punctatus
ENSPTIG00000010462	VARS	95	94.236	ENSSTOG00000013112	VARS	85	94.243	Ictidomys_tridecemlineatus
ENSPTIG00000010462	VARS	95	92.110	ENSJJAG00000019749	-	85	91.357	Jaculus_jaculus
ENSPTIG00000010462	VARS	95	76.282	ENSJJAG00000015343	-	88	75.651	Jaculus_jaculus
ENSPTIG00000010462	VARS	97	66.344	ENSKMAG00000009455	vars	85	68.587	Kryptolebias_marmoratus
ENSPTIG00000010462	VARS	93	67.937	ENSLBEG00000010341	vars	85	68.186	Labrus_bergylta
ENSPTIG00000010462	VARS	95	63.939	ENSLACG00000015232	VARS	90	64.690	Latimeria_chalumnae
ENSPTIG00000010462	VARS	94	70.669	ENSLOCG00000004240	vars	86	70.718	Lepisosteus_oculatus
ENSPTIG00000010462	VARS	95	93.681	ENSLAFG00000023090	VARS	85	93.309	Loxodonta_africana
ENSPTIG00000010462	VARS	95	94.963	ENSMFAG00000001032	VARS	85	94.981	Macaca_fascicularis
ENSPTIG00000010462	VARS	95	94.963	ENSMMUG00000006828	VARS	85	94.981	Macaca_mulatta
ENSPTIG00000010462	VARS	95	94.872	ENSMNEG00000042072	VARS	85	94.888	Macaca_nemestrina
ENSPTIG00000010462	VARS	95	94.780	ENSMLEG00000039307	VARS	85	94.796	Mandrillus_leucophaeus
ENSPTIG00000010462	VARS	93	68.558	ENSMAMG00000003949	vars	86	68.556	Mastacembelus_armatus
ENSPTIG00000010462	VARS	94	68.479	ENSMZEG00005018327	vars	84	68.908	Maylandia_zebra
ENSPTIG00000010462	VARS	95	92.399	ENSMAUG00000006715	Vars	85	92.472	Mesocricetus_auratus
ENSPTIG00000010462	VARS	95	93.761	ENSMICG00000003548	VARS	85	93.680	Microcebus_murinus
ENSPTIG00000010462	VARS	95	89.469	ENSMOCG00000015404	Vars	85	89.219	Microtus_ochrogaster
ENSPTIG00000010462	VARS	93	68.241	ENSMMOG00000015801	vars	85	68.309	Mola_mola
ENSPTIG00000010462	VARS	94	86.944	ENSMODG00000015204	-	85	87.175	Monodelphis_domestica
ENSPTIG00000010462	VARS	94	68.790	ENSMALG00000022532	vars	85	68.895	Monopterus_albus
ENSPTIG00000010462	VARS	95	93.498	MGP_CAROLIEiJ_G0021491	Vars	85	93.123	Mus_caroli
ENSPTIG00000010462	VARS	95	93.315	ENSMUSG00000007029	Vars	85	92.937	Mus_musculus
ENSPTIG00000010462	VARS	95	93.040	MGP_PahariEiJ_G0020486	Vars	85	92.286	Mus_pahari
ENSPTIG00000010462	VARS	95	93.407	MGP_SPRETEiJ_G0022396	Vars	85	93.030	Mus_spretus
ENSPTIG00000010462	VARS	95	96.789	ENSMPUG00000010821	VARS	86	96.789	Mustela_putorius_furo
ENSPTIG00000010462	VARS	79	93.502	ENSMLUG00000013126	VARS	91	93.993	Myotis_lucifugus
ENSPTIG00000010462	VARS	95	92.857	ENSNGAG00000012151	Vars	85	93.494	Nannospalax_galili
ENSPTIG00000010462	VARS	94	68.502	ENSNBRG00000020520	vars	85	68.836	Neolamprologus_brichardi
ENSPTIG00000010462	VARS	95	94.495	ENSNLEG00000006351	VARS	85	94.424	Nomascus_leucogenys
ENSPTIG00000010462	VARS	94	82.916	ENSMEUG00000011378	VARS	85	82.993	Notamacropus_eugenii
ENSPTIG00000010462	VARS	95	93.590	ENSOPRG00000003607	VARS	85	93.866	Ochotona_princeps
ENSPTIG00000010462	VARS	94	90.994	ENSODEG00000017681	VARS	85	90.512	Octodon_degus
ENSPTIG00000010462	VARS	94	69.006	ENSONIG00000013064	vars	91	70.162	Oreochromis_niloticus
ENSPTIG00000010462	VARS	78	81.593	ENSOANG00000005400	VARS	92	81.818	Ornithorhynchus_anatinus
ENSPTIG00000010462	VARS	95	90.951	ENSOCUG00000022463	VARS	85	91.280	Oryctolagus_cuniculus
ENSPTIG00000010462	VARS	94	68.421	ENSORLG00000013063	vars	85	68.994	Oryzias_latipes
ENSPTIG00000010462	VARS	94	68.784	ENSORLG00020003504	vars	85	69.653	Oryzias_latipes_hni
ENSPTIG00000010462	VARS	94	69.252	ENSORLG00015009001	vars	85	69.526	Oryzias_latipes_hsok
ENSPTIG00000010462	VARS	94	68.643	ENSOMEG00000015016	vars	85	68.909	Oryzias_melastigma
ENSPTIG00000010462	VARS	95	94.312	ENSOGAG00000007515	VARS	85	94.331	Otolemur_garnettii
ENSPTIG00000010462	VARS	50	95.848	ENSOARG00000004625	-	83	95.782	Ovis_aries
ENSPTIG00000010462	VARS	95	95.238	ENSPPAG00000034012	VARS	85	95.260	Pan_paniscus
ENSPTIG00000010462	VARS	95	99.725	ENSPPRG00000014855	VARS	86	99.725	Panthera_pardus
ENSPTIG00000010462	VARS	95	95.238	ENSPTRG00000017985	VARS	85	95.260	Pan_troglodytes
ENSPTIG00000010462	VARS	95	92.974	ENSPANG00000014565	VARS	85	92.963	Papio_anubis
ENSPTIG00000010462	VARS	95	66.875	ENSPKIG00000016304	vars	86	67.609	Paramormyrops_kingsleyae
ENSPTIG00000010462	VARS	94	69.834	ENSPMGG00000023909	vars	85	70.195	Periophthalmus_magnuspinnatus
ENSPTIG00000010462	VARS	95	93.773	ENSPEMG00000006639	Vars	85	93.773	Peromyscus_maniculatus_bairdii
ENSPTIG00000010462	VARS	94	86.204	ENSPCIG00000018553	VARS	85	86.431	Phascolarctos_cinereus
ENSPTIG00000010462	VARS	94	69.628	ENSPFOG00000015690	vars	86	69.680	Poecilia_formosa
ENSPTIG00000010462	VARS	94	70.164	ENSPLAG00000009590	vars	86	69.772	Poecilia_latipinna
ENSPTIG00000010462	VARS	94	69.628	ENSPMEG00000004708	vars	86	69.680	Poecilia_mexicana
ENSPTIG00000010462	VARS	94	67.647	ENSPREG00000013264	vars	85	67.685	Poecilia_reticulata
ENSPTIG00000010462	VARS	95	93.040	ENSPPYG00000016460	VARS	85	93.030	Pongo_abelii
ENSPTIG00000010462	VARS	79	94.409	ENSPCAG00000013565	VARS	71	94.541	Procavia_capensis
ENSPTIG00000010462	VARS	95	94.419	ENSPCOG00000010942	VARS	85	94.893	Propithecus_coquereli
ENSPTIG00000010462	VARS	95	91.575	ENSPVAG00000012403	VARS	85	91.543	Pteropus_vampyrus
ENSPTIG00000010462	VARS	94	68.592	ENSPNYG00000022511	vars	85	68.928	Pundamilia_nyererei
ENSPTIG00000010462	VARS	93	69.625	ENSPNAG00000020962	vars	85	69.753	Pygocentrus_nattereri
ENSPTIG00000010462	VARS	95	93.773	ENSRNOG00000000867	Vars	85	93.773	Rattus_norvegicus
ENSPTIG00000010462	VARS	95	94.963	ENSRBIG00000041669	VARS	85	94.981	Rhinopithecus_bieti
ENSPTIG00000010462	VARS	95	94.963	ENSRROG00000045490	VARS	85	94.981	Rhinopithecus_roxellana
ENSPTIG00000010462	VARS	95	94.872	ENSSBOG00000035402	VARS	85	94.888	Saimiri_boliviensis_boliviensis
ENSPTIG00000010462	VARS	91	86.207	ENSSHAG00000006937	VARS	82	86.500	Sarcophilus_harrisii
ENSPTIG00000010462	VARS	95	67.774	ENSSFOG00015014272	vars	86	68.402	Scleropages_formosus
ENSPTIG00000010462	VARS	93	67.698	ENSSMAG00000009596	vars	85	67.704	Scophthalmus_maximus
ENSPTIG00000010462	VARS	94	68.374	ENSSDUG00000014177	vars	85	68.984	Seriola_dumerili
ENSPTIG00000010462	VARS	97	66.264	ENSSLDG00000025316	vars	85	68.893	Seriola_lalandi_dorsalis
ENSPTIG00000010462	VARS	93	69.161	ENSSPAG00000017068	vars	85	69.393	Stegastes_partitus
ENSPTIG00000010462	VARS	95	93.779	ENSSSCG00000038950	VARS	85	94.243	Sus_scrofa
ENSPTIG00000010462	VARS	82	67.511	ENSTRUG00000012307	vars	88	68.264	Takifugu_rubripes
ENSPTIG00000010462	VARS	95	68.108	ENSTNIG00000008011	vars	89	68.474	Tetraodon_nigroviridis
ENSPTIG00000010462	VARS	53	97.753	ENSTBEG00000004728	-	54	97.753	Tupaia_belangeri
ENSPTIG00000010462	VARS	95	85.897	ENSTTRG00000014128	VARS	85	85.781	Tursiops_truncatus
ENSPTIG00000010462	VARS	95	92.532	ENSUAMG00000010424	VARS	85	92.435	Ursus_americanus
ENSPTIG00000010462	VARS	88	96.364	ENSUMAG00000013486	VARS	84	97.712	Ursus_maritimus
ENSPTIG00000010462	VARS	95	95.700	ENSVVUG00000021323	VARS	85	95.450	Vulpes_vulpes
ENSPTIG00000010462	VARS	95	65.198	ENSXETG00000024076	vars	85	65.498	Xenopus_tropicalis
ENSPTIG00000010462	VARS	93	70.000	ENSXCOG00000019172	vars	85	69.815	Xiphophorus_couchianus
ENSPTIG00000010462	VARS	93	69.772	ENSXMAG00000010927	vars	86	69.589	Xiphophorus_maculatus