EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000010789 (Gene tree)
Gene ID: 102948748
Gene Symbol: LSG1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 38255 bases
Position: chrKE721944.1:2639880-2678134
Accession: 102948748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000009841	MMR_HSR1	PF01926.23	4.9e-14	1	1
ENSPTIP00000009830	MMR_HSR1	PF01926.23	6.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000013775	LSG1-202	4521	XM_007090979	ENSPTIP00000009841	659 (aa)	XP_007091041	UPI00042C2D11
ENSPTIT00000013763	LSG1-201	4659	-	ENSPTIP00000009830	705 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000010789's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000010789's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000010789	LSG1	50	35.075	ENSPTIG00000011307	GNL1	50	39.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000010789	LSG1	99	84.954	ENSG00000041802	LSG1	98	89.655	Homo_sapiens
ENSPTIG00000010789	LSG1	100	64.199	ENSAPOG00000009694	lsg1	100	63.705	Acanthochromis_polyacanthus
ENSPTIG00000010789	LSG1	100	89.091	ENSAMEG00000009343	LSG1	100	89.091	Ailuropoda_melanoleuca
ENSPTIG00000010789	LSG1	98	64.396	ENSACIG00000012406	lsg1	100	63.079	Amphilophus_citrinellus
ENSPTIG00000010789	LSG1	100	63.308	ENSAOCG00000016066	lsg1	100	63.293	Amphiprion_ocellaris
ENSPTIG00000010789	LSG1	100	64.048	ENSAPEG00000003252	lsg1	100	63.595	Amphiprion_percula
ENSPTIG00000010789	LSG1	98	64.706	ENSATEG00000011794	lsg1	100	64.599	Anabas_testudineus
ENSPTIG00000010789	LSG1	95	64.603	ENSACAG00000004222	LSG1	99	64.127	Anolis_carolinensis
ENSPTIG00000010789	LSG1	99	86.474	ENSANAG00000021153	LSG1	99	86.474	Aotus_nancymaae
ENSPTIG00000010789	LSG1	100	63.731	ENSACLG00000000520	lsg1	100	63.582	Astatotilapia_calliptera
ENSPTIG00000010789	LSG1	100	62.090	ENSAMXG00000008271	lsg1	100	62.946	Astyanax_mexicanus
ENSPTIG00000010789	LSG1	99	85.562	ENSBTAG00000008461	LSG1	99	85.562	Bos_taurus
ENSPTIG00000010789	LSG1	68	48.558	WBGene00016907	C53H9.2	94	52.482	Caenorhabditis_elegans
ENSPTIG00000010789	LSG1	99	85.866	ENSCJAG00000013962	LSG1	99	85.866	Callithrix_jacchus
ENSPTIG00000010789	LSG1	95	89.297	ENSCAFG00000013445	LSG1	100	89.297	Canis_familiaris
ENSPTIG00000010789	LSG1	100	88.066	ENSCAFG00020002216	LSG1	99	89.103	Canis_lupus_dingo
ENSPTIG00000010789	LSG1	100	85.432	ENSCHIG00000015769	LSG1	100	85.432	Capra_hircus
ENSPTIG00000010789	LSG1	99	85.410	ENSTSYG00000001447	LSG1	99	85.410	Carlito_syrichta
ENSPTIG00000010789	LSG1	95	77.266	ENSCAPG00000009856	LSG1	99	76.948	Cavia_aperea
ENSPTIG00000010789	LSG1	99	85.106	ENSCCAG00000035744	LSG1	99	85.106	Cebus_capucinus
ENSPTIG00000010789	LSG1	99	85.714	ENSCATG00000042060	LSG1	99	84.347	Cercocebus_atys
ENSPTIG00000010789	LSG1	99	86.474	ENSCSAG00000008796	LSG1	92	86.474	Chlorocebus_sabaeus
ENSPTIG00000010789	LSG1	100	69.440	ENSCPBG00000015941	LSG1	83	69.440	Chrysemys_picta_bellii
ENSPTIG00000010789	LSG1	70	63.158	ENSCING00000007079	-	97	63.158	Ciona_intestinalis
ENSPTIG00000010789	LSG1	77	54.733	ENSCSAVG00000002514	-	96	54.733	Ciona_savignyi
ENSPTIG00000010789	LSG1	99	85.866	ENSCANG00000030709	LSG1	99	85.866	Colobus_angolensis_palliatus
ENSPTIG00000010789	LSG1	99	82.549	ENSCGRG00001019846	Lsg1	99	82.549	Cricetulus_griseus_chok1gshd
ENSPTIG00000010789	LSG1	99	82.549	ENSCGRG00000014617	Lsg1	99	82.549	Cricetulus_griseus_crigri
ENSPTIG00000010789	LSG1	98	63.761	ENSCSEG00000008522	lsg1	100	63.118	Cynoglossus_semilaevis
ENSPTIG00000010789	LSG1	98	65.163	ENSCVAG00000002484	lsg1	100	64.222	Cyprinodon_variegatus
ENSPTIG00000010789	LSG1	100	65.611	ENSDARG00000015352	lsg1	100	65.408	Danio_rerio
ENSPTIG00000010789	LSG1	99	83.510	ENSDNOG00000006224	LSG1	99	83.207	Dasypus_novemcinctus
ENSPTIG00000010789	LSG1	83	59.426	FBgn0266284	Ns3	91	57.588	Drosophila_melanogaster
ENSPTIG00000010789	LSG1	89	85.333	ENSETEG00000003888	LSG1	89	85.333	Echinops_telfairi
ENSPTIG00000010789	LSG1	88	56.040	ENSEBUG00000003119	lsg1	85	55.798	Eptatretus_burgeri
ENSPTIG00000010789	LSG1	99	88.298	ENSEASG00005000678	LSG1	99	88.298	Equus_asinus_asinus
ENSPTIG00000010789	LSG1	99	88.450	ENSECAG00000017659	LSG1	99	88.450	Equus_caballus
ENSPTIG00000010789	LSG1	88	83.761	ENSEEUG00000015217	LSG1	87	83.761	Erinaceus_europaeus
ENSPTIG00000010789	LSG1	100	60.181	ENSELUG00000023973	lsg1	100	60.483	Esox_lucius
ENSPTIG00000010789	LSG1	100	98.634	ENSFCAG00000024957	LSG1	100	98.634	Felis_catus
ENSPTIG00000010789	LSG1	99	64.122	ENSFALG00000007210	LSG1	94	66.775	Ficedula_albicollis
ENSPTIG00000010789	LSG1	99	77.828	ENSFDAG00000017373	LSG1	99	77.828	Fukomys_damarensis
ENSPTIG00000010789	LSG1	97	63.272	ENSFHEG00000003680	lsg1	99	63.609	Fundulus_heteroclitus
ENSPTIG00000010789	LSG1	83	72.269	ENSGMOG00000015834	lsg1	91	69.536	Gadus_morhua
ENSPTIG00000010789	LSG1	99	64.511	ENSGALG00000007058	LSG1	87	64.715	Gallus_gallus
ENSPTIG00000010789	LSG1	97	64.642	ENSGAFG00000015831	lsg1	99	63.982	Gambusia_affinis
ENSPTIG00000010789	LSG1	98	62.270	ENSGACG00000009323	lsg1	100	61.504	Gasterosteus_aculeatus
ENSPTIG00000010789	LSG1	99	86.018	ENSGGOG00000000520	LSG1	99	86.018	Gorilla_gorilla
ENSPTIG00000010789	LSG1	100	64.018	ENSHBUG00000005659	lsg1	100	63.868	Haplochromis_burtoni
ENSPTIG00000010789	LSG1	99	75.867	ENSHGLG00000017390	LSG1	99	76.772	Heterocephalus_glaber_female
ENSPTIG00000010789	LSG1	99	75.867	ENSHGLG00100018587	LSG1	99	76.772	Heterocephalus_glaber_male
ENSPTIG00000010789	LSG1	98	62.906	ENSHCOG00000016848	lsg1	100	62.727	Hippocampus_comes
ENSPTIG00000010789	LSG1	100	64.350	ENSIPUG00000008631	lsg1	100	63.595	Ictalurus_punctatus
ENSPTIG00000010789	LSG1	81	78.044	ENSSTOG00000010234	LSG1	99	80.040	Ictidomys_tridecemlineatus
ENSPTIG00000010789	LSG1	99	79.123	ENSJJAG00000015513	Lsg1	99	79.123	Jaculus_jaculus
ENSPTIG00000010789	LSG1	98	61.978	ENSKMAG00000009681	lsg1	100	61.818	Kryptolebias_marmoratus
ENSPTIG00000010789	LSG1	98	62.539	ENSLBEG00000024261	lsg1	100	62.064	Labrus_bergylta
ENSPTIG00000010789	LSG1	100	65.970	ENSLACG00000013399	LSG1	100	65.620	Latimeria_chalumnae
ENSPTIG00000010789	LSG1	98	66.410	ENSLOCG00000004918	lsg1	100	65.861	Lepisosteus_oculatus
ENSPTIG00000010789	LSG1	99	82.979	ENSLAFG00000012919	-	99	82.979	Loxodonta_africana
ENSPTIG00000010789	LSG1	99	86.322	ENSMFAG00000039903	LSG1	99	84.954	Macaca_fascicularis
ENSPTIG00000010789	LSG1	99	86.322	ENSMMUG00000010708	LSG1	99	86.322	Macaca_mulatta
ENSPTIG00000010789	LSG1	99	86.170	ENSMNEG00000031538	LSG1	99	84.650	Macaca_nemestrina
ENSPTIG00000010789	LSG1	99	86.322	ENSMLEG00000041184	LSG1	99	86.322	Mandrillus_leucophaeus
ENSPTIG00000010789	LSG1	100	63.268	ENSMAMG00000000470	lsg1	100	62.819	Mastacembelus_armatus
ENSPTIG00000010789	LSG1	100	64.168	ENSMZEG00005017865	lsg1	100	64.018	Maylandia_zebra
ENSPTIG00000010789	LSG1	89	65.990	ENSMGAG00000007050	LSG1	99	65.990	Meleagris_gallopavo
ENSPTIG00000010789	LSG1	91	80.763	ENSMAUG00000016976	Lsg1	93	80.763	Mesocricetus_auratus
ENSPTIG00000010789	LSG1	99	83.891	ENSMICG00000049087	LSG1	99	83.891	Microcebus_murinus
ENSPTIG00000010789	LSG1	99	80.333	ENSMOCG00000022136	Lsg1	99	80.665	Microtus_ochrogaster
ENSPTIG00000010789	LSG1	83	73.333	ENSMMOG00000008884	lsg1	95	73.333	Mola_mola
ENSPTIG00000010789	LSG1	99	57.749	ENSMODG00000019828	LSG1	99	57.080	Monodelphis_domestica
ENSPTIG00000010789	LSG1	100	80.577	MGP_CAROLIEiJ_G0020648	Lsg1	100	80.728	Mus_caroli
ENSPTIG00000010789	LSG1	100	81.032	ENSMUSG00000022538	Lsg1	100	81.184	Mus_musculus
ENSPTIG00000010789	LSG1	98	81.818	MGP_PahariEiJ_G0016352	Lsg1	100	81.667	Mus_pahari
ENSPTIG00000010789	LSG1	100	80.728	MGP_SPRETEiJ_G0021544	Lsg1	100	80.880	Mus_spretus
ENSPTIG00000010789	LSG1	100	89.378	ENSMPUG00000003734	LSG1	100	89.378	Mustela_putorius_furo
ENSPTIG00000010789	LSG1	100	86.667	ENSMLUG00000012548	LSG1	100	86.667	Myotis_lucifugus
ENSPTIG00000010789	LSG1	99	80.395	ENSNGAG00000021872	Lsg1	99	80.395	Nannospalax_galili
ENSPTIG00000010789	LSG1	99	86.322	ENSNLEG00000008293	LSG1	99	86.322	Nomascus_leucogenys
ENSPTIG00000010789	LSG1	71	68.041	ENSMEUG00000009041	-	82	68.513	Notamacropus_eugenii
ENSPTIG00000010789	LSG1	100	63.433	ENSONIG00000002635	lsg1	100	63.393	Oreochromis_niloticus
ENSPTIG00000010789	LSG1	95	71.542	ENSOANG00000012742	LSG1	99	71.542	Ornithorhynchus_anatinus
ENSPTIG00000010789	LSG1	99	85.106	ENSOCUG00000004817	LSG1	99	85.106	Oryctolagus_cuniculus
ENSPTIG00000010789	LSG1	98	62.963	ENSORLG00000007695	lsg1	100	63.238	Oryzias_latipes
ENSPTIG00000010789	LSG1	98	62.229	ENSORLG00020016286	lsg1	100	61.619	Oryzias_latipes_hni
ENSPTIG00000010789	LSG1	98	63.003	ENSORLG00015012025	lsg1	100	62.519	Oryzias_latipes_hsok
ENSPTIG00000010789	LSG1	98	61.824	ENSOMEG00000022379	lsg1	100	62.199	Oryzias_melastigma
ENSPTIG00000010789	LSG1	99	85.347	ENSOGAG00000003475	LSG1	99	85.347	Otolemur_garnettii
ENSPTIG00000010789	LSG1	100	85.152	ENSOARG00000020403	LSG1	100	85.152	Ovis_aries
ENSPTIG00000010789	LSG1	99	85.714	ENSPPAG00000029271	LSG1	99	85.714	Pan_paniscus
ENSPTIG00000010789	LSG1	100	98.649	ENSPPRG00000010281	LSG1	100	98.649	Panthera_pardus
ENSPTIG00000010789	LSG1	99	85.562	ENSPTRG00000015760	LSG1	99	85.562	Pan_troglodytes
ENSPTIG00000010789	LSG1	99	85.866	ENSPANG00000018249	LSG1	99	84.498	Papio_anubis
ENSPTIG00000010789	LSG1	97	64.496	ENSPKIG00000002895	lsg1	99	63.718	Paramormyrops_kingsleyae
ENSPTIG00000010789	LSG1	96	65.319	ENSPSIG00000009821	LSG1	100	64.697	Pelodiscus_sinensis
ENSPTIG00000010789	LSG1	95	63.291	ENSPMGG00000000931	lsg1	100	63.133	Periophthalmus_magnuspinnatus
ENSPTIG00000010789	LSG1	99	80.787	ENSPEMG00000012082	-	99	80.484	Peromyscus_maniculatus_bairdii
ENSPTIG00000010789	LSG1	99	58.407	ENSPMAG00000007451	lsg1	99	58.407	Petromyzon_marinus
ENSPTIG00000010789	LSG1	100	66.321	ENSPCIG00000013890	LSG1	82	66.321	Phascolarctos_cinereus
ENSPTIG00000010789	LSG1	97	65.319	ENSPFOG00000021882	lsg1	99	65.099	Poecilia_formosa
ENSPTIG00000010789	LSG1	97	64.198	ENSPLAG00000019536	lsg1	99	64.242	Poecilia_latipinna
ENSPTIG00000010789	LSG1	97	64.496	ENSPMEG00000017281	lsg1	99	64.297	Poecilia_mexicana
ENSPTIG00000010789	LSG1	97	54.863	ENSPREG00000006048	lsg1	99	54.451	Poecilia_reticulata
ENSPTIG00000010789	LSG1	92	85.033	ENSPPYG00000014425	LSG1	100	85.033	Pongo_abelii
ENSPTIG00000010789	LSG1	90	85.333	ENSPCAG00000005511	LSG1	90	85.333	Procavia_capensis
ENSPTIG00000010789	LSG1	99	85.106	ENSPCOG00000012360	LSG1	99	85.106	Propithecus_coquereli
ENSPTIG00000010789	LSG1	100	63.582	ENSPNYG00000021994	lsg1	100	63.433	Pundamilia_nyererei
ENSPTIG00000010789	LSG1	100	65.008	ENSPNAG00000015533	lsg1	100	64.750	Pygocentrus_nattereri
ENSPTIG00000010789	LSG1	100	81.146	ENSRNOG00000001727	Lsg1	100	81.297	Rattus_norvegicus
ENSPTIG00000010789	LSG1	99	85.106	ENSRBIG00000029053	LSG1	99	85.106	Rhinopithecus_bieti
ENSPTIG00000010789	LSG1	99	85.106	ENSRROG00000037702	LSG1	99	85.106	Rhinopithecus_roxellana
ENSPTIG00000010789	LSG1	65	58.683	YGL099W	LSG1	68	58.683	Saccharomyces_cerevisiae
ENSPTIG00000010789	LSG1	99	86.626	ENSSBOG00000034938	LSG1	99	86.626	Saimiri_boliviensis_boliviensis
ENSPTIG00000010789	LSG1	78	65.348	ENSSHAG00000003487	LSG1	100	63.894	Sarcophilus_harrisii
ENSPTIG00000010789	LSG1	98	63.846	ENSSFOG00015008955	lsg1	100	63.540	Scleropages_formosus
ENSPTIG00000010789	LSG1	98	64.275	ENSSDUG00000004622	lsg1	100	63.801	Seriola_dumerili
ENSPTIG00000010789	LSG1	98	64.451	ENSSLDG00000010869	lsg1	100	63.514	Seriola_lalandi_dorsalis
ENSPTIG00000010789	LSG1	81	83.626	ENSSARG00000012981	LSG1	81	83.626	Sorex_araneus
ENSPTIG00000010789	LSG1	100	68.161	ENSSPUG00000016347	LSG1	100	68.012	Sphenodon_punctatus
ENSPTIG00000010789	LSG1	88	67.029	ENSSPAG00000005508	lsg1	100	62.991	Stegastes_partitus
ENSPTIG00000010789	LSG1	100	84.977	ENSSSCG00000011827	LSG1	100	84.977	Sus_scrofa
ENSPTIG00000010789	LSG1	89	65.494	ENSTGUG00000009068	LSG1	100	64.657	Taeniopygia_guttata
ENSPTIG00000010789	LSG1	98	60.991	ENSTRUG00000017380	lsg1	100	60.091	Takifugu_rubripes
ENSPTIG00000010789	LSG1	98	64.451	ENSTNIG00000015570	lsg1	100	64.253	Tetraodon_nigroviridis
ENSPTIG00000010789	LSG1	100	77.727	ENSTTRG00000000559	LSG1	100	77.727	Tursiops_truncatus
ENSPTIG00000010789	LSG1	100	90.137	ENSUAMG00000012454	LSG1	100	90.137	Ursus_americanus
ENSPTIG00000010789	LSG1	100	90.137	ENSUMAG00000000855	LSG1	100	90.137	Ursus_maritimus
ENSPTIG00000010789	LSG1	95	81.310	ENSVPAG00000012400	LSG1	100	81.310	Vicugna_pacos
ENSPTIG00000010789	LSG1	95	88.179	ENSVVUG00000008956	LSG1	97	88.179	Vulpes_vulpes
ENSPTIG00000010789	LSG1	100	64.889	ENSXETG00000003451	lsg1	100	65.243	Xenopus_tropicalis
ENSPTIG00000010789	LSG1	97	64.142	ENSXCOG00000003239	lsg1	99	63.499	Xiphophorus_couchianus
ENSPTIG00000010789	LSG1	97	63.691	ENSXMAG00000005536	lsg1	99	63.072	Xiphophorus_maculatus